RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 RTL3Q8N8U3 475 aaKnown RBP7.28□□□□□ -1.24
BRCA1-230ENST00000634433 PJA1Q8NG27 643 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 POF1BQ8WVV4 589 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 CCT6BQ92526 530 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 ZNF75CPQ92670 426 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-230ENST00000634433 ATP2A3Q93084 1043 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 AGAP3Q96P47 875 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 GPR62Q9BZJ7 368 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 IL22Q9GZX6 179 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 NMUR1Q9HB89 426 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 PAK6Q9NQU5 681 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-230ENST00000634433 PPARGC1AQ9UBK2 798 aaKnown RBP7.28□□□□□ -1.24
BRCA1-230ENST00000634433 VANGL2Q9ULK5 521 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 CXorf49A8MYA2 514 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-230ENST00000634433 TBC1D4O60343 1298 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 CACNG3O60359 315 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 PQBP1O60828 265 aaKnown RBP7.28□□□□□ -1.24
BRCA1-230ENST00000634433 HAPLN1P10915 354 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-230ENST00000634433 CCNB1P14635 433 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 RHOQP17081 205 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 TUFMP49411 452 aaKnown RBP7.28□□□□□ -1.24
BRCA1-230ENST00000634433 ALDH7A1P49419 539 aaKnown RBP7.28□□□□□ -1.24
BRCA1-230ENST00000634433 NDST2P52849 883 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 GEMP55040 296 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 ARPP19P56211 112 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 CDH17Q12864 832 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 GPNMBQ14956 572 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 MGAT5BQ3V5L5 792 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 STXBP5Q5T5C0 1151 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 GRTP1Q5TC63 336 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 RNF43Q68DV7 783 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 KCTD11Q693B1 232 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 SH2D5Q6ZV89 423 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 ANKRD33Q7Z3H0 272 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 KLHDC8BQ8IXV7 354 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 C10orf67Q8IYJ2 551 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 FAM26EQ8N5C1 309 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 ATAD1Q8NBU5 361 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 ARNTL2Q8WYA1 636 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 FATE1Q969F0 183 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 CELF6Q96J87 481 aaKnown RBP7.28□□□□□ -1.24
BRCA1-230ENST00000634433 SERAC1Q96JX3 654 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 BTN2A3PQ96KV6 586 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 TOX2Q96NM4 488 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 DEFB118Q96PH6 123 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 FCRL5Q96RD9 977 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 CEP41Q9BYV8 373 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 RASSF4Q9H2L5 321 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 HIPK3Q9H422 1215 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 MANSC1Q9H8J5 431 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 PLAC1Q9HBJ0 212 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 HAUS2Q9NVX0 235 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 MARCH5Q9NX47 278 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 NSMCE4AQ9NXX6 385 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 GMIPQ9P107 970 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 PRKAG3Q9UGI9 489 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 PHTF1Q9UMS5 762 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 HS3ST4Q9Y661 456 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 NLRC5Q86WI3 1866 aa7.28□□□□□ -1.24
BRCA1-230ENST00000634433 PATJQ8NI35 1801 aa7.27□□□□□ -1.24
BRCA1-230ENST00000634433 FAM237BA0A1B0GVD1 139 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 MTMR11A4FU01 709 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 F5H423 210 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-230ENST00000634433 H0YHG0 523 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 GOLGA8RI6L899 631 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 EDF1O60869 148 aaKnown RBP7.27□□□□□ -1.25
BRCA1-230ENST00000634433 USP1O94782 785 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 MOCS2O96007 188 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-230ENST00000634433 AMHP03971 560 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 TROVE2P10155 538 aaKnown RBP eCLIP7.27□□□□□ -1.25
BRCA1-230ENST00000634433 NFKB1P19838 968 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 GALNSP34059 522 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 CD68P34810 354 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-230ENST00000634433 CRHR1P34998 444 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 CCNFP41002 786 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 ACTN3Q08043 901 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-230ENST00000634433 NIPAL4Q0D2K0 466 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 DBN1Q16643 649 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 USP41Q3LFD5 358 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 AFMIDQ63HM1 303 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 TRMT10BQ6PF06 316 aaKnown RBP7.27□□□□□ -1.25
BRCA1-230ENST00000634433 TBC1D1Q86TI0 1168 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-230ENST00000634433 TP53INP2Q8IXH6 220 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 ZNF276Q8N554 614 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.27□□□□□ -1.25
BRCA1-230ENST00000634433 NETO2Q8NC67 525 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 OR52K1Q8NGK4 314 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 ZNF398Q8TD17 642 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 NSMCE1Q8WV22 266 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 OVCA2Q8WZ82 227 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 OXNAD1Q96HP4 312 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-230ENST00000634433 PGLYRP2Q96PD5 576 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 IL12RB2Q99665 862 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 CPNE1Q99829 537 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 PRKD2Q9BZL6 878 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 ZYG11BQ9C0D3 744 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 GLOD4Q9HC38 313 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.27□□□□□ -1.25
BRCA1-230ENST00000634433 SYBUQ9NX95 663 aa7.27□□□□□ -1.25
BRCA1-230ENST00000634433 SIRPGQ9P1W8 387 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms