RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 ZBTB45Q96K62 511 aaPredicted RBP3.48□□□□□ -1.85
VPS8-228ENST00000628962 MEIS3Q99687 375 aa3.48□□□□□ -1.85
VPS8-228ENST00000628962 MECRQ9BV79 373 aa3.48□□□□□ -1.85
VPS8-228ENST00000628962 EIF2B3Q9NR50 452 aaKnown RBP3.48□□□□□ -1.85
VPS8-228ENST00000628962 NKIRAS2Q9NYR9 191 aa3.48□□□□□ -1.85
VPS8-228ENST00000628962 TBC1D29Q9UFV1 150 aa3.48□□□□□ -1.85
VPS8-228ENST00000628962 CNOT7Q9UIV1 285 aaKnown RBP3.48□□□□□ -1.85
VPS8-228ENST00000628962 SUFUQ9UMX1 484 aa3.48□□□□□ -1.85
VPS8-228ENST00000628962 CAMK2AQ9UQM7 478 aa3.48□□□□□ -1.85
VPS8-228ENST00000628962 FAM90A20PA6NIJ5 464 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 SLC38A8A6NNN8 435 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 CES2O00748 559 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 TSPAN4O14817 238 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 DHHO43323 396 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 GUCY1B2O75343 617 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 PMPCBO75439 489 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 ACADMP11310 421 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 MCCP23508 829 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 COPB1P53618 953 aaKnown RBP3.47□□□□□ -1.85
VPS8-228ENST00000628962 EIF4A2Q14240 407 aaKnown RBP3.47□□□□□ -1.85
VPS8-228ENST00000628962 TBCEQ15813 527 aaPredicted RBP3.47□□□□□ -1.85
VPS8-228ENST00000628962 ALDH1L2Q3SY69 923 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 SLC9C1Q4G0N8 1177 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 RILPL1Q5EBL4 403 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 TMEM196Q5HYL7 178 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 LIPMQ5VYY2 423 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 ARMC3Q5W041 872 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 ANKRD40Q6AI12 368 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 MSANTD2Q6P1R3 559 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 SLC22A25Q6T423 547 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 RANBP10Q6VN20 620 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 TMPRSS12Q86WS5 348 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 DIS3L2Q8IYB7 885 aaKnown RBP3.47□□□□□ -1.85
VPS8-228ENST00000628962 NGEFQ8N5V2 710 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 C11orf44Q8N8P7 122 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 LINS1Q8NG48 757 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 REXO5Q96IC2 774 aaKnown RBP3.47□□□□□ -1.85
VPS8-228ENST00000628962 LMLNQ96KR4 655 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 WDR24Q96S15 920 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 GHITMQ9H3K2 345 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 RMI1Q9H9A7 625 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 PLEKHA2Q9HB19 425 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 VEZTQ9HBM0 779 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 DIAPH3Q9NSV4 1193 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 FBXO28Q9NVF7 368 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 RIMKLBQ9ULI2 386 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 SLC27A6Q9Y2P4 619 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 GDAQ9Y2T3 454 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 MED14O60244 1454 aa3.47□□□□□ -1.85
VPS8-228ENST00000628962 NPHP4O75161 1426 aaPredicted RBP3.46□□□□□ -1.86
VPS8-228ENST00000628962 CNTLNQ9NXG0 1405 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 AGLP35573 1532 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 DNMT1P26358 1616 aaKnown RBP3.46□□□□□ -1.86
VPS8-228ENST00000628962 BIVM-ERCC5R4GMW8 1640 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 AGPSO00116 658 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 NTN3O00634 580 aaPredicted RBP3.46□□□□□ -1.86
VPS8-228ENST00000628962 TNPO2O14787 897 aaKnown RBP3.46□□□□□ -1.86
VPS8-228ENST00000628962 P4HA2O15460 535 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 PTP4A3O75365 173 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 WDR47O94967 919 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 F9P00740 461 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 IGKV3-20P01619 116 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 WEE2P0C1S8 567 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 AKR1B1P15121 316 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 PRKCHP24723 683 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 ACTN2P35609 894 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 SUMO2P61956 95 aaKnown RBP3.46□□□□□ -1.86
VPS8-228ENST00000628962 HSF1Q00613 529 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 B4GALNT1Q00973 533 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 TIAL1Q01085 375 aaKnown RBP eCLIP3.46□□□□□ -1.86
VPS8-228ENST00000628962 CALD1Q05682 793 aaKnown RBP3.46□□□□□ -1.86
VPS8-228ENST00000628962 GOLGA8FQ08AF8 430 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 TBL3Q12788 808 aaKnown RBP3.46□□□□□ -1.86
VPS8-228ENST00000628962 MAMLD1Q13495 774 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 TDGQ13569 410 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 MYBPC2Q14324 1141 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 CLCA4Q14CN2 919 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 WTAPQ15007 396 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 CAPRIN2Q6IMN6 1127 aaKnown RBP3.46□□□□□ -1.86
VPS8-228ENST00000628962 KLHL24Q6TFL4 600 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 DCDC5Q6ZRR9 648 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 PTCHD4Q6ZW05 846 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 H1FNTQ75WM6 255 aaPredicted RBP3.46□□□□□ -1.86
VPS8-228ENST00000628962 RASGRP2Q7LDG7 609 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 CUZD1Q86UP6 607 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 FOXP4Q8IVH2 680 aaPredicted RBP3.46□□□□□ -1.86
VPS8-228ENST00000628962 SUN3Q8TAQ9 357 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 KCNG4Q8TDN1 519 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 SLC22A17Q8WUG5 538 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 MCRS1Q96EZ8 462 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 NLRP4Q96MN2 994 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 PIGSQ96S52 555 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 C17orf80Q9BSJ5 609 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 SLC25A18Q9H1K4 315 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 STN1Q9H668 368 aaKnown RBP3.46□□□□□ -1.86
VPS8-228ENST00000628962 SYNCQ9H7C4 482 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 ADD3Q9UEY8 706 aaKnown RBP3.46□□□□□ -1.86
VPS8-228ENST00000628962 STEAP1Q9UHE8 339 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 ZBTB1Q9Y2K1 713 aa3.46□□□□□ -1.86
VPS8-228ENST00000628962 UBE2J1Q9Y385 318 aaPredicted RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms