RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 HORMAD1Q86X24 394 aa13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 ZNF677Q86XU0 584 aa13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 PYROXD2Q8N2H3 581 aa13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 GALNT15Q8N3T1 639 aa13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 NETO2Q8NC67 525 aa13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 BAP1Q92560 729 aa13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 ARHGEF2Q92974 986 aaKnown RBP13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 SKA1Q96BD8 255 aa13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 SPON2Q9BUD6 331 aa13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 HDAC8Q9BY41 377 aa13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 KLC2Q9H0B6 622 aa13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 ATP13A1Q9HD20 1204 aa13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 OR12D3Q9UGF7 316 aa13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 DACH1Q9UI36 760 aa13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 PCDHGA1Q9Y5H4 931 aa13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 LY6G6EA0A0G2JKS1 128 aa13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 POM121BA6NF01 834 aa13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 SIGLEC6O43699 453 aa13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 RFPL3O75679 317 aa13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 LRIG2O94898 1065 aa13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 MYF5P13349 255 aa13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 DGKAP23743 735 aa13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 ABL2P42684 1182 aa13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 PTPN9P43378 593 aa13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 ARRB1P49407 418 aaPredicted RBP13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 CCNHP51946 323 aaPredicted RBP13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 COPB1P53618 953 aaKnown RBP13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 STAT4Q14765 748 aa13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 SYCP1Q15431 976 aa13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 CARD16Q5EG05 197 aa13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 ZNF783Q6ZMS7 281 aa13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 ABI3BPQ7Z7G0 1075 aa13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 TMPRSS12Q86WS5 348 aa13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 OR6K2Q8NGY2 324 aa13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 HNRNPLLQ8WVV9 542 aaKnown RBP13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 KLF6Q99612 283 aaPredicted RBP13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 TM6SF2Q9BZW4 377 aa13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 OSBPL2Q9H1P3 480 aa13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 DNAI1Q9UI46 699 aa13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 PNMA8BQ9ULN7 279 aaPredicted RBP13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 FADS3Q9Y5Q0 445 aa13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 U3KQA8 63 aa13.79□□□□□ -0.2
SOX2-OT-241ENST00000626948 YKT6O15498 198 aa13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 PRNPP04156 253 aa13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 ADRB3P13945 408 aa13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 NUDT1P36639 197 aa13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 GSCP56915 257 aaPredicted RBP13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 C1QBPQ07021 282 aaKnown RBP13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 OVGP1Q12889 678 aa13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 TARDBPQ13148 414 aaKnown RBP eCLIP13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 CLEC16AQ2KHT3 1053 aa13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 INAVAQ3KP66 663 aa13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 SLC45A4Q5BKX6 768 aa13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 ZNF542PQ5EBM4 170 aa13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 HES3Q5TGS1 186 aa13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 NEK5Q6P3R8 708 aa13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 WDR59Q6PJI9 974 aa13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 MON1BQ7L1V2 547 aa13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 STRADAQ7RTN6 431 aa13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 PCDH20Q8N6Y1 951 aaKnown RBP13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 PDCD7Q8N8D1 485 aaKnown RBP13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 KLHDC7BQ96G42 594 aa13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 BBC3Q96PG8 261 aaPredicted RBP13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 HEPHQ9BQS7 1158 aa13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 SYT11Q9BT88 431 aa13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 CEP44Q9C0F1 390 aa13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 TMEM248Q9NWD8 314 aa13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 LIMA1Q9UHB6 759 aaKnown RBP13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 KLF15Q9UIH9 416 aa13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 ITM2BQ9Y287 266 aa13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 PAXBP1Q9Y5B6 917 aa13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 BAHCC1Q9P281 2608 aa13.78□□□□□ -0.2
SOX2-OT-241ENST00000626948 LRRC10BA6NIK2 292 aa13.77□□□□□ -0.21
SOX2-OT-241ENST00000626948 TLX3O43711 291 aaPredicted RBP13.77□□□□□ -0.21
SOX2-OT-241ENST00000626948 PCDH8O95206 1070 aa13.77□□□□□ -0.21
SOX2-OT-241ENST00000626948 PAK4O96013 591 aaPredicted RBP13.77□□□□□ -0.21
SOX2-OT-241ENST00000626948 RHOQP17081 205 aa13.77□□□□□ -0.21
SOX2-OT-241ENST00000626948 CKMT2P17540 419 aa13.77□□□□□ -0.21
SOX2-OT-241ENST00000626948 ITIH2P19823 946 aa13.77□□□□□ -0.21
SOX2-OT-241ENST00000626948 HNRNPA2B1P22626 353 aaKnown RBP13.77□□□□□ -0.21
SOX2-OT-241ENST00000626948 ITGB7P26010 798 aa13.77□□□□□ -0.21
SOX2-OT-241ENST00000626948 L1CAMP32004 1257 aa13.77□□□□□ -0.21
SOX2-OT-241ENST00000626948 NEK3P51956 506 aa13.77□□□□□ -0.21
SOX2-OT-241ENST00000626948 RPL7AP62424 266 aaKnown RBP13.77□□□□□ -0.21
SOX2-OT-241ENST00000626948 INSM1Q01101 510 aaPredicted RBP13.77□□□□□ -0.21
SOX2-OT-241ENST00000626948 OGDHQ02218 1023 aa13.77□□□□□ -0.21
SOX2-OT-241ENST00000626948 FZD2Q14332 565 aa13.77□□□□□ -0.21
SOX2-OT-241ENST00000626948 PPP1R15BQ5SWA1 713 aa13.77□□□□□ -0.21
SOX2-OT-241ENST00000626948 ACBD5Q5T8D3 534 aaPredicted RBP13.77□□□□□ -0.21
SOX2-OT-241ENST00000626948 PDZD3Q86UT5 571 aa13.77□□□□□ -0.21
SOX2-OT-241ENST00000626948 PHF13Q86YI8 300 aaPredicted RBP13.77□□□□□ -0.21
SOX2-OT-241ENST00000626948 OXR1Q8N573 874 aa13.77□□□□□ -0.21
SOX2-OT-241ENST00000626948 FAM172AQ8WUF8 416 aa13.77□□□□□ -0.21
SOX2-OT-241ENST00000626948 KLHL11Q9NVR0 708 aa13.77□□□□□ -0.21
SOX2-OT-241ENST00000626948 LRRK1Q38SD2 2015 aa13.76□□□□□ -0.21
SOX2-OT-241ENST00000626948 A0A087WV48 116 aa13.76□□□□□ -0.21
SOX2-OT-241ENST00000626948 LGALS16A8MUM7 142 aa13.76□□□□□ -0.21
SOX2-OT-241ENST00000626948 CASC3O15234 703 aaKnown RBP13.76□□□□□ -0.21
SOX2-OT-241ENST00000626948 CCP110O43303 1012 aa13.76□□□□□ -0.21
SOX2-OT-241ENST00000626948 PIAS2O75928 621 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms