RNA–Protein interactions for RNA: ENST00000625905.1

NELFE-214, Transcript of negative elongation factor complex member E, humanhuman

TSL 5 BASIC

Gene NELFE, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-214ENST00000625905 DAAM2Q86T65 1068 aa9.38□□□□□ -0.91
NELFE-214ENST00000625905 SLC41A1Q8IVJ1 513 aa9.38□□□□□ -0.91
NELFE-214ENST00000625905 GPR161Q8N6U8 529 aaKnown RBP9.38□□□□□ -0.91
NELFE-214ENST00000625905 C12orf50Q8NA57 414 aaPredicted RBP9.38□□□□□ -0.91
NELFE-214ENST00000625905 NETO2Q8NC67 525 aa9.38□□□□□ -0.91
NELFE-214ENST00000625905 CADM4Q8NFZ8 388 aa9.38□□□□□ -0.91
NELFE-214ENST00000625905 OR6K2Q8NGY2 324 aa9.38□□□□□ -0.91
NELFE-214ENST00000625905 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.38□□□□□ -0.91
NELFE-214ENST00000625905 SNX19Q92543 992 aa9.38□□□□□ -0.91
NELFE-214ENST00000625905 PIGKQ92643 395 aa9.38□□□□□ -0.91
NELFE-214ENST00000625905 PPP1R16AQ96I34 528 aa9.38□□□□□ -0.91
NELFE-214ENST00000625905 EXOC2Q96KP1 924 aa9.38□□□□□ -0.91
NELFE-214ENST00000625905 CALR3Q96L12 384 aaKnown RBP9.38□□□□□ -0.91
NELFE-214ENST00000625905 HEPHQ9BQS7 1158 aa9.38□□□□□ -0.91
NELFE-214ENST00000625905 CINPQ9BW66 212 aaPredicted RBP9.38□□□□□ -0.91
NELFE-214ENST00000625905 GOLPH3Q9H4A6 298 aa9.38□□□□□ -0.91
NELFE-214ENST00000625905 PARD6AQ9NPB6 346 aa9.38□□□□□ -0.91
NELFE-214ENST00000625905 VPS45Q9NRW7 570 aa9.38□□□□□ -0.91
NELFE-214ENST00000625905 SEMA4GQ9NTN9 838 aa9.38□□□□□ -0.91
NELFE-214ENST00000625905 ETNK2Q9NVF9 386 aa9.38□□□□□ -0.91
NELFE-214ENST00000625905 IPO11Q9UI26 975 aaKnown RBP9.38□□□□□ -0.91
NELFE-214ENST00000625905 SARDHQ9UL12 918 aa9.38□□□□□ -0.91
NELFE-214ENST00000625905 PPM1HQ9ULR3 514 aa9.38□□□□□ -0.91
NELFE-214ENST00000625905 ABCA7Q8IZY2 2146 aa9.38□□□□□ -0.91
NELFE-214ENST00000625905 EP300Q09472 2414 aaPredicted RBP9.37□□□□□ -0.91
NELFE-214ENST00000625905 RCCD1A6NED2 376 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 BTNL10A8MVZ5 291 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 ZNF487B1APH4 448 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 J3KR12 359 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 PLK4O00444 970 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 KRIT1O00522 736 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 NRDCO43847 1150 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 FOXD2O60548 495 aaPredicted RBP9.37□□□□□ -0.91
NELFE-214ENST00000625905 ZNF821O75541 412 aaPredicted RBP9.37□□□□□ -0.91
NELFE-214ENST00000625905 LEFTY1O75610 366 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 FSBPO95073 299 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 DRD3P35462 400 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 LMNB2Q03252 620 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 IL10RBQ08334 325 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 CCDC15Q0P6D6 951 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 KIF5AQ12840 1032 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 RFTN1Q14699 578 aaPredicted RBP9.37□□□□□ -0.91
NELFE-214ENST00000625905 ANKRD20A8PQ5CZ79 823 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 ATXN7L2Q5T6C5 722 aaPredicted RBP9.37□□□□□ -0.91
NELFE-214ENST00000625905 TMCO4Q5TGY1 634 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 AGBL4Q5VU57 503 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 DCAF12L1Q5VU92 463 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 NCBP2-AS2Q69YL0 99 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 NCEH1Q6PIU2 408 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 ARHGAP36Q6ZRI8 547 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 PRR23CQ6ZRP0 262 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 RABEPKQ7Z6M1 372 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 SYT12Q8IV01 421 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 TP53INP2Q8IXH6 220 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 PLPP6Q8IY26 295 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 KIAA2013Q8IYS2 634 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 RGL4Q8IZJ4 473 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 TMIEQ8NEW7 156 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 OR2T34Q8NGX1 318 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 OR14C36Q8NHC7 312 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 TPCN2Q8NHX9 752 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 PCDH19Q8TAB3 1148 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 NSMCE1Q8WV22 266 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 RAPGEF5Q92565 580 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 FAF2Q96CS3 445 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 ZNF419Q96HQ0 510 aaPredicted RBP9.37□□□□□ -0.91
NELFE-214ENST00000625905 ZNF830Q96NB3 372 aaPredicted RBP9.37□□□□□ -0.91
NELFE-214ENST00000625905 NEUROG2Q9H2A3 272 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 SMOC1Q9H4F8 434 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 C6orf106Q9H6K1 298 aaPredicted RBP9.37□□□□□ -0.91
NELFE-214ENST00000625905 DDX56Q9NY93 547 aaKnown RBP9.37□□□□□ -0.91
NELFE-214ENST00000625905 LHX3Q9UBR4 397 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 SUSD2Q9UGT4 822 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.37□□□□□ -0.91
NELFE-214ENST00000625905 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.37□□□□□ -0.91
NELFE-214ENST00000625905 WASF2Q9Y6W5 498 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 SDK1Q7Z5N4 2213 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 NUP205Q92621 2012 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 CEP192Q8TEP8 1941 aa9.37□□□□□ -0.91
NELFE-214ENST00000625905 VPS13AQ96RL7 3174 aa9.36□□□□□ -0.91
NELFE-214ENST00000625905 MACROD2A1Z1Q3 448 aa9.36□□□□□ -0.91
NELFE-214ENST00000625905 METTL12A8MUP2 240 aa9.36□□□□□ -0.91
NELFE-214ENST00000625905 APOL1O14791 398 aa9.36□□□□□ -0.91
NELFE-214ENST00000625905 ARHGAP6O43182 974 aa9.36□□□□□ -0.91
NELFE-214ENST00000625905 PLRG1O43660 514 aaKnown RBP9.36□□□□□ -0.91
NELFE-214ENST00000625905 PALMO75781 387 aa9.36□□□□□ -0.91
NELFE-214ENST00000625905 CFIP05156 583 aa9.36□□□□□ -0.91
NELFE-214ENST00000625905 UGT2B4P06133 528 aa9.36□□□□□ -0.91
NELFE-214ENST00000625905 GNSP15586 552 aa9.36□□□□□ -0.91
NELFE-214ENST00000625905 KDELR1P24390 212 aa9.36□□□□□ -0.91
NELFE-214ENST00000625905 IL4RP24394 825 aa9.36□□□□□ -0.91
NELFE-214ENST00000625905 ITGB7P26010 798 aa9.36□□□□□ -0.91
NELFE-214ENST00000625905 GKP32189 559 aa9.36□□□□□ -0.91
NELFE-214ENST00000625905 NEK3P51956 506 aa9.36□□□□□ -0.91
NELFE-214ENST00000625905 RAD51Q06609 339 aa9.36□□□□□ -0.91
NELFE-214ENST00000625905 GALNT2Q10471 571 aa9.36□□□□□ -0.91
NELFE-214ENST00000625905 CNTN1Q12860 1018 aa9.36□□□□□ -0.91
NELFE-214ENST00000625905 ZNF235Q14590 738 aa9.36□□□□□ -0.91
NELFE-214ENST00000625905 NUMA1Q14980 2115 aa9.36□□□□□ -0.91
NELFE-214ENST00000625905 PAFAH1B3Q15102 231 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms