RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 LRRC8EQ6NSJ5 796 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 CEP97Q8IW35 865 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 PQLC1Q8N2U9 271 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 ICA1LQ8NDH6 482 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 IPMKQ8NFU5 416 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 NXNL1Q96CM4 212 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 SERPINI1Q99574 410 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 NSMCE4AQ9NXX6 385 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 PRPF19Q9UMS4 504 aaKnown RBP11.42□□□□□ -0.58
VARS2-213ENST00000625423 PSMD13Q9UNM6 376 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 CDYLQ9Y232 598 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 DTNAQ9Y4J8 743 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 NUP205Q92621 2012 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 PDCD11Q14690 1871 aaKnown RBP11.42□□□□□ -0.58
VARS2-213ENST00000625423 ENO3P13929 434 aaPredicted RBP11.42□□□□□ -0.58
VARS2-213ENST00000625423 GSTT1P30711 240 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 PSEN2P49810 448 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 CLCNKBP51801 687 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 CRYBB1P53674 252 aaPredicted RBP11.42□□□□□ -0.58
VARS2-213ENST00000625423 MRPS22P82650 360 aaKnown RBP11.42□□□□□ -0.58
VARS2-213ENST00000625423 SATB1Q01826 763 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 FOLH1Q04609 750 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 PDK3Q15120 406 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 CNPY1Q3B7I2 92 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 OGFRL1Q5TC84 451 aaPredicted RBP11.42□□□□□ -0.58
VARS2-213ENST00000625423 ESRP1Q6NXG1 681 aaKnown RBP11.42□□□□□ -0.58
VARS2-213ENST00000625423 PKN3Q6P5Z2 889 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 BNC2Q6ZN30 1099 aaPredicted RBP11.42□□□□□ -0.58
VARS2-213ENST00000625423 LINC00523Q86TU6 105 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 TAC4Q86UU9 113 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 MFSD6LQ8IWD5 586 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 CCNYL1Q8N7R7 359 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 MS4A4AQ96JQ5 239 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 SIK2Q9H0K1 926 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 ACOT9Q9Y305 439 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 DICER1Q9UPY3 1922 aaKnown RBP11.42□□□□□ -0.58
VARS2-213ENST00000625423 TARM1B6A8C7 271 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 PGK1P00558 417 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 CHRM1P11229 460 aaPredicted RBP11.42□□□□□ -0.58
VARS2-213ENST00000625423 GRIA2P42262 883 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 LHX1P48742 406 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 ATXN3P54252 364 aaPredicted RBP11.42□□□□□ -0.58
VARS2-213ENST00000625423 FLOT2Q14254 428 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 PCID2Q5JVF3 399 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 MAP3K21Q5TCX8 1036 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 PM20D1Q6GTS8 502 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 PLEKHH3Q7Z736 793 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 TLK2Q86UE8 772 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 SPNS2Q8IVW8 549 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 C3orf58Q8NDZ4 430 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 ZFAND2BQ8WV99 257 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 ZNF419Q96HQ0 510 aaPredicted RBP11.42□□□□□ -0.58
VARS2-213ENST00000625423 TBL1YQ9BQ87 522 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 CENPKQ9BS16 269 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 CCDC28BQ9BUN5 200 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 SPATA16Q9BXB7 569 aa11.42□□□□□ -0.58
VARS2-213ENST00000625423 GNEQ9Y223 722 aaKnown RBP11.42□□□□□ -0.58
VARS2-213ENST00000625423 UNCXA6NJT0 531 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 TMEM233B4DJY2 109 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 PEX1O43933 1283 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 CALRP27797 417 aaKnown RBP11.41□□□□□ -0.58
VARS2-213ENST00000625423 NSUN2Q08J23 767 aaKnown RBP eCLIP11.41□□□□□ -0.58
VARS2-213ENST00000625423 ZNF423Q2M1K9 1284 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 PIGGQ5H8A4 983 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 OLFML2BQ68BL8 750 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 DCLRE1AQ6PJP8 1040 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 KDELC2Q7Z4H8 507 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 CPSF7Q8N684 471 aaKnown RBP11.41□□□□□ -0.58
VARS2-213ENST00000625423 BRI3BPQ8WY22 251 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 SGF29Q96ES7 293 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 GAD1Q99259 594 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 ZNF385DQ9H6B1 395 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 SLC2A6Q9UGQ3 507 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 BPTFQ12830 3046 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 FAM95CA0A1B0GW59 222 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 STX16-NPEPL1H3BU86 382 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 MYL3P08590 195 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 DPP6P42658 865 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 PRKAA2P54646 552 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 RAB10P61026 200 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 BEX3Q00994 111 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 MS4A2Q01362 244 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 CEACAM7Q14002 265 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 ARHGAP18Q8N392 663 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 DCUN1D1Q96GG9 259 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 FICDQ9BVA6 458 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 RRN3Q9NYV6 651 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 C6orf203Q9P0P8 240 aaPredicted RBP11.41□□□□□ -0.58
VARS2-213ENST00000625423 VTI1BQ9UEU0 232 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 AAR2Q9Y312 384 aaKnown RBP11.41□□□□□ -0.58
VARS2-213ENST00000625423 AP3B1O00203 1094 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 FAM163BP0C2L3 166 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 STMN1P16949 149 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 ARNTP27540 789 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 GRM2Q14416 872 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 TSTD2Q5T7W7 516 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 USP50Q70EL3 339 aaPredicted RBP11.41□□□□□ -0.58
VARS2-213ENST00000625423 LPPQ93052 612 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 SMARCD1Q96GM5 515 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 GPR78Q96P69 363 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms