RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 CENPIQ92674 756 aaPredicted RBP12.93□□□□□ -0.34
PNKP-217ENST00000625216 PTPRN2Q92932 1015 aa12.93□□□□□ -0.34
PNKP-217ENST00000625216 C2orf49Q9BVC5 232 aaPredicted RBP12.93□□□□□ -0.34
PNKP-217ENST00000625216 MTG2Q9H4K7 406 aa12.93□□□□□ -0.34
PNKP-217ENST00000625216 RETREG1Q9H6L5 497 aa12.93□□□□□ -0.34
PNKP-217ENST00000625216 EIF2B4Q9UI10 523 aaKnown RBP12.93□□□□□ -0.34
PNKP-217ENST00000625216 VPS28Q9UK41 221 aa12.93□□□□□ -0.34
PNKP-217ENST00000625216 FZD4Q9ULV1 537 aa12.93□□□□□ -0.34
PNKP-217ENST00000625216 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.93□□□□□ -0.34
PNKP-217ENST00000625216 IGLV3-10A0A075B6K4 115 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 LRRC72A6NJI9 287 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 RNF8O76064 485 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 SLU7O95391 586 aaKnown RBP12.92□□□□□ -0.34
PNKP-217ENST00000625216 KRT1P04264 644 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 RHOCP08134 193 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 PYGMP11217 842 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 GOT1P17174 413 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 CD27P26842 260 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 PMLP29590 882 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 AFF3P51826 1226 aaKnown RBP12.92□□□□□ -0.34
PNKP-217ENST00000625216 SHC2P98077 582 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 CKAP4Q07065 602 aaKnown RBP12.92□□□□□ -0.34
PNKP-217ENST00000625216 CKAP5Q14008 2032 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 SMTNL2Q2TAL5 461 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 ARL13BQ3SXY8 428 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 C6orf118Q5T5N4 469 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 LRRC38Q5VT99 294 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 FAM46CQ5VWP2 391 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 ZNF783Q6ZMS7 281 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 STRADAQ7RTN6 431 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 ZNF572Q7Z3I7 529 aaPredicted RBP12.92□□□□□ -0.34
PNKP-217ENST00000625216 POLNQ7Z5Q5 900 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 MMAAQ8IVH4 418 aaKnown RBP12.92□□□□□ -0.34
PNKP-217ENST00000625216 KATNAL2Q8IYT4 538 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 STK40Q8N2I9 435 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 ZCCHC9Q8N567 271 aaKnown RBP12.92□□□□□ -0.34
PNKP-217ENST00000625216 FRS2Q8WU20 508 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 OMDQ99983 421 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 HERPUD2Q9BSE4 406 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 MUC3BQ9H195 1237 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 NEUROG2Q9H2A3 272 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 C6orf106Q9H6K1 298 aaPredicted RBP12.92□□□□□ -0.34
PNKP-217ENST00000625216 ZWILCHQ9H900 591 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 FSCN3Q9NQT6 498 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 ANLNQ9NQW6 1124 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 PCSK1NQ9UHG2 260 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 ANGPTL2Q9UKU9 493 aa12.92□□□□□ -0.34
PNKP-217ENST00000625216 E9PAM4 449 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 I6L893 689 aaPredicted RBP12.91□□□□□ -0.34
PNKP-217ENST00000625216 ALOX15BO15296 676 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 MID1O15344 667 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 GJB3O75712 270 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 RNASEH2AO75792 299 aaKnown RBP12.91□□□□□ -0.34
PNKP-217ENST00000625216 CNTN5O94779 1100 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 GGCXP38435 758 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 STK19P49842 368 aaPredicted RBP12.91□□□□□ -0.34
PNKP-217ENST00000625216 IRAK1P51617 712 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 NRG1Q02297 640 aaPredicted RBP12.91□□□□□ -0.34
PNKP-217ENST00000625216 SLC20A2Q08357 652 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 C2orf54Q08AI8 447 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 GRIK2Q13002 908 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 TEAD4Q15561 434 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 DLG2Q15700 870 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 HADHQ16836 314 aaKnown RBP12.91□□□□□ -0.34
PNKP-217ENST00000625216 ACCSLQ4AC99 568 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 ALFQ53S48 1182 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 SEL1L2Q5TEA6 688 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 CCDC181Q5TID7 509 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 KIAA0895LQ68EN5 471 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 FAM131BQ86XD5 332 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 CEP112Q8N8E3 955 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 OR52K2Q8NGK3 314 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 OR2T34Q8NGX1 318 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 ACTRT1Q8TDG2 376 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 OR8D1Q8WZ84 308 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 BIRC7Q96CA5 298 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 SNRNP25Q9BV90 132 aaKnown RBP12.91□□□□□ -0.34
PNKP-217ENST00000625216 KDM4CQ9H3R0 1056 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 PPARGC1AQ9UBK2 798 aaKnown RBP12.91□□□□□ -0.34
PNKP-217ENST00000625216 HS3ST2Q9Y278 367 aa12.91□□□□□ -0.34
PNKP-217ENST00000625216 FARP1Q9Y4F1 1045 aaPredicted RBP12.91□□□□□ -0.34
PNKP-217ENST00000625216 CXorf51AA0A1B0GTR3 108 aa12.9□□□□□ -0.34
PNKP-217ENST00000625216 A0A1W2PP55 124 aa12.9□□□□□ -0.34
PNKP-217ENST00000625216 ILVBLA1L0T0 632 aa12.9□□□□□ -0.34
PNKP-217ENST00000625216 PGRMC1O00264 195 aaKnown RBP12.9□□□□□ -0.34
PNKP-217ENST00000625216 GIPC1O14908 333 aa12.9□□□□□ -0.34
PNKP-217ENST00000625216 MCF2LO15068 1137 aa12.9□□□□□ -0.34
PNKP-217ENST00000625216 SLC7A4O43246 635 aa12.9□□□□□ -0.34
PNKP-217ENST00000625216 FSBPO95073 299 aa12.9□□□□□ -0.34
PNKP-217ENST00000625216 CER1O95813 267 aa12.9□□□□□ -0.34
PNKP-217ENST00000625216 IL1BP01584 269 aa12.9□□□□□ -0.34
PNKP-217ENST00000625216 ZNF883P0CG24 379 aa12.9□□□□□ -0.34
PNKP-217ENST00000625216 RARAP10276 462 aa12.9□□□□□ -0.34
PNKP-217ENST00000625216 CD59P13987 128 aa12.9□□□□□ -0.34
PNKP-217ENST00000625216 DESP17661 470 aa12.9□□□□□ -0.34
PNKP-217ENST00000625216 OR1E1P30953 314 aa12.9□□□□□ -0.34
PNKP-217ENST00000625216 ADRA1BP35368 520 aa12.9□□□□□ -0.34
PNKP-217ENST00000625216 GRIA4P48058 902 aa12.9□□□□□ -0.34
PNKP-217ENST00000625216 CCR5P51681 352 aa12.9□□□□□ -0.34
PNKP-217ENST00000625216 CLCN6P51797 869 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms