RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 CACNA2D2Q9NY47 1150 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 PTBP2Q9UKA9 531 aaKnown RBP14.31□□□□□ -0.12
LDB3-209ENST00000623056 SLC39A10Q9ULF5 831 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 A0A1W2PPW3 197 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 ZNF839A8K0R7 811 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 NFKBIEO00221 500 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 SDHDO14521 159 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 ZBTB11O95625 1053 aaPredicted RBP14.3□□□□□ -0.12
LDB3-209ENST00000623056 FUCA1P04066 466 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 INHBBP09529 407 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 ATICP31939 592 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 PTPN9P43378 593 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 BCAP31P51572 246 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 STAT5BP51692 787 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 IFRD2Q12894 506 aaPredicted RBP14.3□□□□□ -0.12
LDB3-209ENST00000623056 C6orf10Q5SRN2 563 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 PPP1R26Q5T8A7 1209 aaPredicted RBP14.3□□□□□ -0.12
LDB3-209ENST00000623056 REP15Q6BDI9 236 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 OGFOD2Q6N063 350 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 TMEM135Q86UB9 458 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 KDM1BQ8NB78 822 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 DDHD1Q8NEL9 900 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 REPS2Q8NFH8 660 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 TNIP2Q8NFZ5 429 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 HMGCLL1Q8TB92 370 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 C11orf84Q9BUA3 381 aaPredicted RBP14.3□□□□□ -0.12
LDB3-209ENST00000623056 NT5C1AQ9BXI3 368 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 SARDHQ9UL12 918 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 VANGL2Q9ULK5 521 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 K7EPI3 171 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 ACKR2O00590 384 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 PHGDHO43175 533 aaKnown RBP14.3□□□□□ -0.12
LDB3-209ENST00000623056 XPOTO43592 962 aaKnown RBP14.3□□□□□ -0.12
LDB3-209ENST00000623056 EGFRP00533 1210 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 BMP2P12643 396 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 HDCP19113 662 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 CD247P20963 164 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 SAT1P21673 171 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 MYF6P23409 242 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 FSTL1Q12841 308 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 DCLRE1AQ6PJP8 1040 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 TMEM110Q86TL2 294 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 PELI3Q8N2H9 469 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 CENPSQ8N2Z9 138 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 FAM110BQ8TC76 370 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 CLEC4CQ8WTT0 213 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 STYXQ8WUJ0 223 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 CENPIQ92674 756 aaPredicted RBP14.3□□□□□ -0.12
LDB3-209ENST00000623056 MFSD3Q96ES6 412 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 ABHD8Q96I13 439 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 MAELQ96JY0 434 aaKnown RBP14.3□□□□□ -0.12
LDB3-209ENST00000623056 DOK1Q99704 481 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 MCMBPQ9BTE3 642 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 C2orf40Q9H1Z8 148 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 TRPC7Q9HCX4 862 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 SPAG4Q9NPE6 437 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 TLK1Q9UKI8 766 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 KIAA1257Q9ULG3 409 aa14.3□□□□□ -0.12
LDB3-209ENST00000623056 COL11A1P12107 1806 aaPredicted RBP14.29□□□□□ -0.12
LDB3-209ENST00000623056 TRIM64A6NGJ6 449 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 SAC3D1A6NKF1 404 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 INO80B-WBP1J3KQ70 363 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 DLGAP1O14490 977 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 DDHD2O94830 711 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 ALDH2P05091 517 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 UGT1A6P19224 532 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 UGT1A1P22309 533 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 UGT1A4P22310 534 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 UGT1A3P35503 534 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 UGT1A5P35504 534 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 HALP42357 657 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 GLUD2P49448 558 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 CSRP3P50461 194 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 CSE1LP55060 971 aaKnown RBP14.29□□□□□ -0.12
LDB3-209ENST00000623056 STX5Q13190 355 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 PMS2P3Q13401 168 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 MXD4Q14582 209 aaPredicted RBP14.29□□□□□ -0.12
LDB3-209ENST00000623056 GRM3Q14832 879 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 PKDCCQ504Y2 493 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 FGD3Q5JSP0 725 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 AARS2Q5JTZ9 985 aaKnown RBP14.29□□□□□ -0.12
LDB3-209ENST00000623056 GPR107Q5VW38 600 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 NANOGP8Q6NSW7 305 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 KCNMB4Q86W47 210 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 CCNYL1Q8N7R7 359 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 CCNYQ8ND76 341 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 ZNF420Q8TAQ5 688 aaPredicted RBP14.29□□□□□ -0.12
LDB3-209ENST00000623056 KCTD4Q8WVF5 259 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 TSNARE1Q96NA8 513 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 TCF12Q99081 682 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 TUT1Q9H6E5 874 aaKnown RBP14.29□□□□□ -0.12
LDB3-209ENST00000623056 IARS2Q9NSE4 1012 aaKnown RBP14.29□□□□□ -0.12
LDB3-209ENST00000623056 CD300AQ9UGN4 299 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 ANKRD6Q9Y2G4 727 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 TRPC5OSA6NMA1 111 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 DLX3O60479 287 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 ADAM23O75077 832 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 SEC24DO94855 1032 aaPredicted RBP14.29□□□□□ -0.12
LDB3-209ENST00000623056 DCKP27707 260 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 ICAM3P32942 547 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms