RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 RARS2Q5T160 578 aaKnown RBP7.11□□□□□ -1.27
CBWD3-219ENST00000622817 UBAP2Q5T6F2 1119 aaKnown RBP7.11□□□□□ -1.27
CBWD3-219ENST00000622817 RNF43Q68DV7 783 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 C3orf62Q6ZUJ4 267 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 GPR149Q86SP6 731 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 CCNJLQ8IV13 435 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 ARID3BQ8IVW6 561 aaPredicted RBP7.11□□□□□ -1.27
CBWD3-219ENST00000622817 CELF5Q8N6W0 485 aaKnown RBP7.11□□□□□ -1.27
CBWD3-219ENST00000622817 OR52K2Q8NGK3 314 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 IMP4Q96G21 291 aaKnown RBP7.11□□□□□ -1.27
CBWD3-219ENST00000622817 OXNAD1Q96HP4 312 aaPredicted RBP7.11□□□□□ -1.27
CBWD3-219ENST00000622817 ZNF419Q96HQ0 510 aaPredicted RBP7.11□□□□□ -1.27
CBWD3-219ENST00000622817 SIGLEC10Q96LC7 697 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 ZSWIM3Q96MP5 696 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 EBNA1BP2Q99848 306 aaKnown RBP7.11□□□□□ -1.27
CBWD3-219ENST00000622817 FEM1AQ9BSK4 669 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 NAT9Q9BTE0 207 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 CENPHQ9H3R5 247 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 PPCSQ9HAB8 311 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 TMBIM4Q9HC24 238 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 CASS4Q9NQ75 786 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 VPS45Q9NRW7 570 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 BFARQ9NZS9 450 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 UBA2Q9UBT2 640 aaPredicted RBP7.11□□□□□ -1.27
CBWD3-219ENST00000622817 ZC3H7BQ9UGR2 993 aaKnown RBP7.11□□□□□ -1.27
CBWD3-219ENST00000622817 SEPT3Q9UH03 358 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 VPS28Q9UK41 221 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 CHMP2BQ9UQN3 213 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 MYO9BQ13459 2157 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 HELZP42694 1942 aaKnown RBP7.11□□□□□ -1.27
CBWD3-219ENST00000622817 TLDC2A0PJX2 215 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 HMGB1P1B2RPK0 211 aaPredicted RBP7.11□□□□□ -1.27
CBWD3-219ENST00000622817 CBX4O00257 560 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 RNF40O75150 1001 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 HOXB8P17481 243 aaPredicted RBP7.11□□□□□ -1.27
CBWD3-219ENST00000622817 CES1P23141 567 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 GRIA1P42261 906 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 NPY2RP49146 381 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 SESN2P58004 480 aaPredicted RBP7.11□□□□□ -1.27
CBWD3-219ENST00000622817 GPX6P59796 221 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 ITKQ08881 620 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 HYAL1Q12794 435 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 CBX2Q14781 532 aaPredicted RBP7.11□□□□□ -1.27
CBWD3-219ENST00000622817 TCEAL5Q5H9L2 206 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 FSCBQ5H9T9 825 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 AGBL2Q5U5Z8 902 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 ANKRD54Q6NXT1 300 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 LEKR1Q6ZMV7 388 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 TPGS1Q6ZTW0 290 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 IGDCC3Q8IVU1 814 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 ZNF557Q8N988 423 aaPredicted RBP7.11□□□□□ -1.27
CBWD3-219ENST00000622817 DNAAF3Q8N9W5 541 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 OR52K1Q8NGK4 314 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 SPATA22Q8NHS9 363 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 FIBINQ8TAL6 211 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 ARL8AQ96BM9 186 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 STAMBPL1Q96FJ0 436 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 PGM2Q96G03 612 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 ATP6V1G3Q96LB4 118 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 TBL1YQ9BQ87 522 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 WDR83Q9BRX9 315 aaKnown RBP7.11□□□□□ -1.27
CBWD3-219ENST00000622817 C2orf49Q9BVC5 232 aaPredicted RBP7.11□□□□□ -1.27
CBWD3-219ENST00000622817 POLR1EQ9GZS1 481 aaKnown RBP7.11□□□□□ -1.27
CBWD3-219ENST00000622817 STMN4Q9H169 189 aaPredicted RBP7.11□□□□□ -1.27
CBWD3-219ENST00000622817 ACSS3Q9H6R3 686 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 GDE1Q9NZC3 331 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 UBP1Q9NZI7 540 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 LMCD1Q9NZU5 365 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 KIAA1522Q9P206 1035 aaPredicted RBP7.11□□□□□ -1.27
CBWD3-219ENST00000622817 OR51B4Q9Y5P0 310 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 MAD1L1Q9Y6D9 718 aa7.11□□□□□ -1.27
CBWD3-219ENST00000622817 CHD5Q8TDI0 1954 aa7.1□□□□□ -1.27
CBWD3-219ENST00000622817 ATG2AQ2TAZ0 1938 aa7.1□□□□□ -1.27
CBWD3-219ENST00000622817 CHD7Q9P2D1 2997 aa7.1□□□□□ -1.27
CBWD3-219ENST00000622817 EXOC1LA0A1B0GW35 172 aa7.1□□□□□ -1.27
CBWD3-219ENST00000622817 MAGEB16A2A368 324 aa7.1□□□□□ -1.27
CBWD3-219ENST00000622817 RGS16O15492 202 aaPredicted RBP7.1□□□□□ -1.27
CBWD3-219ENST00000622817 PMPCBO75439 489 aa7.1□□□□□ -1.27
CBWD3-219ENST00000622817 ZMPSTE24O75844 475 aa7.1□□□□□ -1.27
CBWD3-219ENST00000622817 GLP2RO95838 553 aa7.1□□□□□ -1.27
CBWD3-219ENST00000622817 MT-CYBP00156 380 aaPredicted RBP7.1□□□□□ -1.27
CBWD3-219ENST00000622817 PENKP01210 267 aaPredicted RBP7.1□□□□□ -1.27
CBWD3-219ENST00000622817 PGAM1P18669 254 aa7.1□□□□□ -1.27
CBWD3-219ENST00000622817 MGAT1P26572 445 aa7.1□□□□□ -1.27
CBWD3-219ENST00000622817 MZF1P28698 734 aaPredicted RBP7.1□□□□□ -1.27
CBWD3-219ENST00000622817 SSTR1P30872 391 aa7.1□□□□□ -1.27
CBWD3-219ENST00000622817 STX2P32856 288 aa7.1□□□□□ -1.27
CBWD3-219ENST00000622817 CSKP41240 450 aa7.1□□□□□ -1.27
CBWD3-219ENST00000622817 CD86P42081 329 aa7.1□□□□□ -1.27
CBWD3-219ENST00000622817 PLK1P53350 603 aa7.1□□□□□ -1.27
CBWD3-219ENST00000622817 WNT3AP56704 352 aa7.1□□□□□ -1.27
CBWD3-219ENST00000622817 GEMIN4P57678 1058 aaKnown RBP7.1□□□□□ -1.27
CBWD3-219ENST00000622817 NIPAL4Q0D2K0 466 aa7.1□□□□□ -1.27
CBWD3-219ENST00000622817 CDH17Q12864 832 aa7.1□□□□□ -1.27
CBWD3-219ENST00000622817 SLC12A1Q13621 1099 aa7.1□□□□□ -1.27
CBWD3-219ENST00000622817 SLC14A2Q15849 920 aa7.1□□□□□ -1.27
CBWD3-219ENST00000622817 KLHL38Q2WGJ6 581 aa7.1□□□□□ -1.27
CBWD3-219ENST00000622817 INO80DQ53TQ3 878 aaPredicted RBP7.1□□□□□ -1.27
CBWD3-219ENST00000622817 TTMPQ5BVD1 217 aa7.1□□□□□ -1.27
CBWD3-219ENST00000622817 FYB2Q5VWT5 728 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms