RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 ANP32DO95626 131 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 GUCA1CO95843 209 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 DLDP09622 509 aaKnown RBP9.21□□□□□ -0.94
HDAC9-229ENST00000622668 RFX3P48380 749 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 ARSIQ5FYB1 569 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 FAM26DQ5JW98 314 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 FAM151BQ6UXP7 276 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 RTN4RL1Q86UN2 441 aaPredicted RBP9.21□□□□□ -0.94
HDAC9-229ENST00000622668 CCDC185Q8N715 623 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 ZNF670Q9BS34 389 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 FRMD8P1Q9BZ68 369 aaPredicted RBP9.21□□□□□ -0.94
HDAC9-229ENST00000622668 CRISPLD2Q9H0B8 497 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 MLXIPLQ9NP71 852 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 ARHGEF3Q9NR81 526 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 RBM12Q9NTZ6 932 aaKnown RBP9.21□□□□□ -0.94
HDAC9-229ENST00000622668 DNPEPQ9ULA0 475 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 LZTS1Q9Y250 596 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 CRYL1Q9Y2S2 319 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 DYRK1BQ9Y463 629 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 TMEM191CA6NGB0 347 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 ZBTB42B2RXF5 422 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 L1CAMP32004 1257 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 PTPN7P35236 360 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 BLKP51451 505 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 AIF1P55008 147 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 WNT3AP56704 352 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 MBTPS1Q14703 1052 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 FOXR2Q6PJQ5 311 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 ITFG1Q8TB96 612 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 PLEKHO2Q8TD55 490 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 FAXDC2Q96IV6 333 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 KLF6Q99612 283 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-229ENST00000622668 CDX2Q99626 313 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-229ENST00000622668 ACE2Q9BYF1 805 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-229ENST00000622668 CYLDQ9NQC7 956 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 CD84Q9UIB8 345 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 APPL1Q9UKG1 709 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 NEMP2A6NFY4 417 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 HACD1B0YJ81 288 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 TM7SF2O76062 418 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 PEX5P50542 639 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 CCZ1BP86790 482 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 CCZ1P86791 482 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-229ENST00000622668 POU4F1Q01851 419 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 SUZ12Q15022 739 aaKnown RBP9.2□□□□□ -0.94
HDAC9-229ENST00000622668 FBXO43Q4G163 708 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 NLRP9Q7RTR0 991 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 HMCESQ96FZ2 354 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 CSPG4P5Q96PW8 444 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 COPS8Q99627 209 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 LRRC1Q9BTT6 524 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 FRMD8Q9BZ67 464 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-229ENST00000622668 LINC00597Q9H2U6 94 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 ZFYVE1Q9HBF4 777 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.2□□□□□ -0.94
HDAC9-229ENST00000622668 SIRPGQ9P1W8 387 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 SPASTQ9UBP0 616 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 ASF1AQ9Y294 204 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 RAD54BQ9Y620 910 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 NUMBLQ9Y6R0 609 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 BRWD1Q9NSI6 2320 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 ERI2A8K979 691 aaKnown RBP9.2□□□□□ -0.94
HDAC9-229ENST00000622668 CFLARO15519 480 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 CATP04040 527 aaKnown RBP9.2□□□□□ -0.94
HDAC9-229ENST00000622668 FGFR3P22607 806 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 MGAT1P26572 445 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 GRIA2P42262 883 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 MAGEA4P43358 317 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 SOX9P48436 509 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 MAPKAPK2P49137 400 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 TNK2Q07912 1038 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 WASHC5Q12768 1159 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 CCNG2Q16589 344 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 PLA2G4EQ3MJ16 856 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 ANKRD20A2Q5SQ80 823 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 ANKRD20A1Q5TYW2 823 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 LRRTM3Q86VH5 581 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 GALNT13Q8IUC8 556 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 PHF7Q9BWX1 381 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-229ENST00000622668 UNKQ9C0B0 810 aaKnown RBP9.2□□□□□ -0.94
HDAC9-229ENST00000622668 VPS51Q9UID3 782 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 SLC27A6Q9Y2P4 619 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 SIT1Q9Y3P8 196 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 SBF2Q86WG5 1849 aa9.2□□□□□ -0.94
HDAC9-229ENST00000622668 RNF225M0QZC1 329 aaPredicted RBP9.19□□□□□ -0.94
HDAC9-229ENST00000622668 NCF2P19878 526 aaPredicted RBP9.19□□□□□ -0.94
HDAC9-229ENST00000622668 HSP90AA5PQ58FG0 334 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 ANKRD54Q6NXT1 300 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 LPCAT2Q7L5N7 544 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 CHST15Q7LFX5 561 aaPredicted RBP9.19□□□□□ -0.94
HDAC9-229ENST00000622668 IRF2BP2Q7Z5L9 587 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 GPR135Q8IZ08 494 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 PIP4K2CQ8TBX8 421 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 BAP1Q92560 729 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 PCMTD2Q9NV79 361 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 DDX60Q8IY21 1712 aaKnown RBP9.19□□□□□ -0.94
HDAC9-229ENST00000622668 SMAPO00193 183 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 TULP3O75386 442 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 LRCH4O75427 683 aa9.19□□□□□ -0.94
HDAC9-229ENST00000622668 ITGAVP06756 1048 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms