RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 ZNF683Q8IZ20 524 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 KIRREL3Q8IZU9 778 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 PHTF2Q8N3S3 785 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 TDRD5Q8NAT2 981 aaKnown RBP9.56□□□□□ -0.88
PDPN-212ENST00000621990 C2CD4AQ8NCU7 369 aaPredicted RBP9.56□□□□□ -0.88
PDPN-212ENST00000621990 PPHLN1Q8NEY8 458 aaKnown RBP9.56□□□□□ -0.88
PDPN-212ENST00000621990 MAPK15Q8TD08 544 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 DTX3LQ8TDB6 740 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 ILKAPQ9H0C8 392 aaPredicted RBP9.56□□□□□ -0.88
PDPN-212ENST00000621990 SIK2Q9H0K1 926 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 TASP1Q9H6P5 420 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 SPC25Q9HBM1 224 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 ARNT2Q9HBZ2 717 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 ZFYVE28Q9HCC9 887 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 ATP13A1Q9HD20 1204 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 NDFIP2Q9NV92 336 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 TLK1Q9UKI8 766 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.56□□□□□ -0.88
PDPN-212ENST00000621990 E9PAM4 449 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 GOLGA8TH3BQL2 631 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 TK2O00142 265 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 PSEN1P49768 467 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 RAB10P61026 200 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 MXRA7P84157 204 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 TNK2Q07912 1038 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 USP10Q14694 798 aaKnown RBP9.56□□□□□ -0.88
PDPN-212ENST00000621990 TRIM71Q2Q1W2 868 aaKnown RBP9.56□□□□□ -0.88
PDPN-212ENST00000621990 MFSD14CQ5VZR4 134 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 TRIM68Q6AZZ1 485 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 KIAA0930Q6ICG6 404 aaPredicted RBP9.56□□□□□ -0.88
PDPN-212ENST00000621990 SPATA2LQ8IUW3 424 aaPredicted RBP9.56□□□□□ -0.88
PDPN-212ENST00000621990 CPSF7Q8N684 471 aaKnown RBP9.56□□□□□ -0.88
PDPN-212ENST00000621990 POU5F2Q8N7G0 328 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 KLHDC9Q8NEP7 349 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 IPMKQ8NFU5 416 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 USP33Q8TEY7 942 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 HASPINQ8TF76 798 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 MRGPRX2Q96LB1 330 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 ADAM2Q99965 735 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 UBE2OQ9C0C9 1292 aaKnown RBP9.56□□□□□ -0.88
PDPN-212ENST00000621990 ZNF385DQ9H6B1 395 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 NOL6Q9H6R4 1146 aaKnown RBP9.56□□□□□ -0.88
PDPN-212ENST00000621990 NMUR1Q9HB89 426 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 SFMBT1Q9UHJ3 866 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 HS3ST4Q9Y661 456 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 SQORQ9Y6N5 450 aa9.56□□□□□ -0.88
PDPN-212ENST00000621990 TMEM189-UBE2V1I3L0A0 370 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 HDAC3O15379 428 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 MSI1O43347 362 aaKnown RBP9.55□□□□□ -0.88
PDPN-212ENST00000621990 DDHD2O94830 711 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 SNUPNO95149 360 aaKnown RBP9.55□□□□□ -0.88
PDPN-212ENST00000621990 OAZ2O95190 189 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 ITGAXP20702 1163 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 CRABP2P29373 138 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 GRIA4P48058 902 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 TUBP50607 506 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 RPL14P50914 215 aaKnown RBP9.55□□□□□ -0.88
PDPN-212ENST00000621990 MLLT6P55198 1093 aaPredicted RBP9.55□□□□□ -0.88
PDPN-212ENST00000621990 KLF10Q13118 480 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 CRHR2Q13324 411 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 POU6F1Q14863 301 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 ZRSR2Q15696 482 aaKnown RBP9.55□□□□□ -0.88
PDPN-212ENST00000621990 RALGPS1Q5JS13 557 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 ESRP1Q6NXG1 681 aaKnown RBP9.55□□□□□ -0.88
PDPN-212ENST00000621990 IRGCQ6NXR0 463 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 FRMD7Q6ZUT3 714 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 UMODL1-AS1Q8N2C9 162 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 FSTL5Q8N475 847 aaPredicted RBP9.55□□□□□ -0.88
PDPN-212ENST00000621990 PDCD6IPQ8WUM4 868 aaKnown RBP9.55□□□□□ -0.88
PDPN-212ENST00000621990 SLC39A13Q96H72 371 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 SERPINB11Q96P15 392 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 ZNF184Q99676 751 aaPredicted RBP9.55□□□□□ -0.88
PDPN-212ENST00000621990 RTKNQ9BST9 563 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 FICDQ9BVA6 458 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 OSBPL1AQ9BXW6 950 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 PRKD2Q9BZL6 878 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 ZCWPW1Q9H0M4 648 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 RRAGCQ9HB90 399 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 TCF7L2Q9NQB0 619 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 CPSF2Q9P2I0 782 aaKnown RBP9.55□□□□□ -0.88
PDPN-212ENST00000621990 VTI1BQ9UEU0 232 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 CDH22Q9UJ99 828 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 MAGED2Q9UNF1 606 aaPredicted RBP9.55□□□□□ -0.88
PDPN-212ENST00000621990 SCML2Q9UQR0 700 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 TLR6Q9Y2C9 796 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 ACOT9Q9Y305 439 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 CASP8AP2Q9UKL3 1982 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 F8W810 466 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 SLCO1B7G3V0H7 640 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 PHGDHO43175 533 aaKnown RBP9.55□□□□□ -0.88
PDPN-212ENST00000621990 MAP3K7O43318 606 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 DCXO43602 365 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 VAPBO95292 243 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 ASGR1P07306 291 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 CHRNGP07510 517 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 COX4I1P13073 169 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 CST5P28325 142 aaPredicted RBP9.55□□□□□ -0.88
PDPN-212ENST00000621990 CDC25CP30307 473 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 ADSLP30566 484 aaPredicted RBP9.55□□□□□ -0.88
PDPN-212ENST00000621990 SLC1A2P43004 574 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms