RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 HGSNATQ68CP4 663 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 DCDC5Q6ZRR9 648 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 ZNF486Q96H40 463 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-214ENST00000620676 GSDMCQ9BYG8 508 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 ATXN3LQ9H3M9 355 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 MAGI3Q5TCQ9 1506 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 A0A096LPK6 155 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 FAM92AA1XBS5 289 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 F8W8V4 182 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 TRIM38O00635 465 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 SLC13A2Q13183 592 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 METTL23Q86XA0 190 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 AGBL3Q8NEM8 1001 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 OR52J3Q8NH60 311 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 CRELD1Q96HD1 420 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 CDH19Q9H159 772 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 ZNF510Q9Y2H8 683 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 LIASO43766 372 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 POLBP06746 335 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 TALDO1P37837 337 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 THOP1P52888 689 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 FPGSQ05932 587 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 C1QBPQ07021 282 aaKnown RBP5.09□□□□□ -1.59
VPS13D-214ENST00000620676 MAMLD1Q13495 774 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 MOGQ16653 247 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 ZNF667Q5HYK9 610 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 ENDOVQ8N8Q3 282 aaKnown RBP5.09□□□□□ -1.59
VPS13D-214ENST00000620676 C3orf58Q8NDZ4 430 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 IFT43Q96FT9 208 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 SLITRK1Q96PX8 696 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 DPCDQ9BVM2 203 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-214ENST00000620676 OXCT2Q9BYC2 517 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-214ENST00000620676 GTF2A1LQ9UNN4 478 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 GMPPBQ9Y5P6 360 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 EYA4O95677 639 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 GUCA1CO95843 209 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 AQP1P29972 269 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 GMPRP36959 345 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 SWI5Q1ZZU3 235 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 ZCCHC12Q6PEW1 402 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 VASH1Q7L8A9 365 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-214ENST00000620676 UTP4Q969X6 686 aaKnown RBP5.09□□□□□ -1.59
VPS13D-214ENST00000620676 SPON2Q9BUD6 331 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 ZC3H12CQ9C0D7 883 aaKnown RBP5.09□□□□□ -1.59
VPS13D-214ENST00000620676 ATP13A3Q9H7F0 1226 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 C9IYK1 514 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 CLDN25C9JDP6 229 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 PHKG2P15735 406 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 ACADVLP49748 655 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 GJA9P57773 515 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 GNG2P59768 71 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 GRSF1Q12849 480 aaKnown RBP eCLIP5.09□□□□□ -1.59
VPS13D-214ENST00000620676 ALX1Q15699 326 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 ALDH16A1Q8IZ83 802 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 SLC47A1Q96FL8 570 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 SLC7A5P2Q9GIP4 190 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 RACGAP1Q9H0H5 632 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 EIF2B4Q9UI10 523 aaKnown RBP5.09□□□□□ -1.59
VPS13D-214ENST00000620676 CDV3Q9UKY7 258 aaKnown RBP5.09□□□□□ -1.59
VPS13D-214ENST00000620676 PRG3Q9Y2Y8 225 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-214ENST00000620676 PKP3Q9Y446 797 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 ADGBQ8N7X0 1667 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 GPR75-ASB3A0A0A6YYF3 556 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 SERPIND1P05546 499 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 CCR10P46092 362 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 PGGT1BP53609 377 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 CLCQ05315 142 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 PXDC1Q5TGL8 231 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 MFSD5Q6N075 450 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 CDYL2Q8N8U2 506 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 PPM1MQ96MI6 270 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 IFT80Q9P2H3 777 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-214ENST00000620676 ASB3Q9Y575 518 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 MBD5Q9P267 1494 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 FAM240BA0A1B0GVZ2 78 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 CES2O00748 559 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 ZW10O43264 779 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 KHDRBS3O75525 346 aaKnown RBP5.09□□□□□ -1.59
VPS13D-214ENST00000620676 GH2P01242 217 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 FCGR1AP12314 374 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 CYP3A5P20815 502 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 PIGHQ14442 188 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-214ENST00000620676 FAM217AQ8IXS0 508 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 OR8K3Q8NH51 312 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 FAR2Q96K12 515 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 PRDM5Q9NQX1 630 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-214ENST00000620676 POMPQ9Y244 141 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 TRIM64A6NGJ6 449 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 TRIM64BA6NI03 449 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 TMEM114B3SHH9 223 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 EFCAB14O75071 495 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 TOMM70O94826 608 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 CCNE2O96020 404 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 RD3LP0DJH9 198 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 TP53BP2Q13625 1128 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 SLC9B1Q4ZJI4 515 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-214ENST00000620676 GRIN3AQ8TCU5 1115 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 MOV10Q9HCE1 1003 aaKnown RBP5.09□□□□□ -1.59
VPS13D-214ENST00000620676 DNAJC11Q9NVH1 559 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms