RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 USP10Q14694 798 aaKnown RBP9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 NOMO1Q15155 1222 aa9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 CCDC14Q49A88 953 aa9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 PPP2R2DQ66LE6 453 aa9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 CRTC3Q6UUV7 619 aa9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 SLCO6A1Q86UG4 719 aa9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 CARM1Q86X55 608 aa9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 OR9I1Q8NGQ6 314 aa9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 TRPC4APQ8TEL6 797 aa9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 UPF1Q92900 1129 aaKnown RBP eCLIP9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 ACDQ96AP0 544 aa9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 NPLQ9BXD5 320 aaPredicted RBP9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 GLIS2Q9BZE0 524 aaPredicted RBP9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 DKK3Q9UBP4 350 aa9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 RUVBL2Q9Y230 463 aaKnown RBP9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 FAM189A1O60320 539 aa9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 CLPXO76031 633 aa9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 GBE1Q04446 702 aa9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 MAPRE1Q15691 268 aaKnown RBP9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 TMEM179Q6ZVK1 233 aa9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 FRA10AC1Q70Z53 315 aa9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 ARFGAP1Q8N6T3 406 aa9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 ZNF597Q96LX8 424 aa9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 CPXM1Q96SM3 734 aa9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 NYAP2Q9P242 653 aa9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 ZDHHC2Q9UIJ5 367 aa9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 PCDHA11Q9Y5I1 949 aa9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 DOCK2Q92608 1830 aa9.91□□□□□ -0.82
TNFAIP3-210ENST00000620204 SYCE1LA8MT33 242 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 FAM47E-STBD1D6RA91 191 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 TPH1P17752 444 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 ELK4P28324 431 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 LRPAP1P30533 357 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 SPRP35270 261 aaPredicted RBP9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 PLIN5Q00G26 463 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 RHDQ02161 417 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 PHKG1Q16816 387 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 CYP51A1Q16850 503 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 UBE2UQ5VVX9 321 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 IQSEC1Q6DN90 963 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 RPS27LQ71UM5 84 aaKnown RBP9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 PID1Q7Z2X4 250 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 SLC22A16Q86VW1 577 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 PLD5Q8N7P1 536 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 SHCBP1Q8NEM2 672 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 SIGLEC10Q96LC7 697 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 AGAP2Q99490 1192 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 RIT2Q99578 217 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 ACO2Q99798 780 aaKnown RBP9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 PNMA8BQ9ULN7 279 aaPredicted RBP9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 SNX5Q9Y5X3 404 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 COPG1Q9Y678 874 aaKnown RBP9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 A0A1W2PQ67 120 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 PRORSD1PA6NEY8 169 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 ASNA1O43681 348 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 XYLBO75191 536 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 DDNO94850 711 aaPredicted RBP9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 NADKO95544 446 aaPredicted RBP9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 C2P06681 752 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 PCNAP12004 261 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 MATN1P21941 496 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 PSMA4P25789 261 aaKnown RBP9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 STX1BP61266 288 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 YWHAEP62258 255 aaKnown RBP9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 SLC25A11Q02978 314 aaKnown RBP9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 STRA6Q9BX79 667 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 ACE2Q9BYF1 805 aaPredicted RBP9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 SPO11Q9Y5K1 396 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 CPQQ9Y646 472 aa9.9□□□□□ -0.82
TNFAIP3-210ENST00000620204 FAM159BA6NKW6 160 aa9.9□□□□□ -0.83
TNFAIP3-210ENST00000620204 TRUB2O95900 331 aaKnown RBP9.9□□□□□ -0.83
TNFAIP3-210ENST00000620204 TTKP33981 857 aa9.9□□□□□ -0.83
TNFAIP3-210ENST00000620204 HPCAL1P37235 193 aa9.9□□□□□ -0.83
TNFAIP3-210ENST00000620204 GP5P40197 560 aa9.9□□□□□ -0.83
TNFAIP3-210ENST00000620204 JAG1P78504 1218 aa9.9□□□□□ -0.83
TNFAIP3-210ENST00000620204 KRT76Q01546 638 aa9.9□□□□□ -0.83
TNFAIP3-210ENST00000620204 CAPRIN1Q14444 709 aaKnown RBP9.9□□□□□ -0.83
TNFAIP3-210ENST00000620204 INPP5AQ14642 412 aa9.9□□□□□ -0.83
TNFAIP3-210ENST00000620204 CCDC142Q17RM4 750 aa9.9□□□□□ -0.83
TNFAIP3-210ENST00000620204 GATAD2AQ86YP4 633 aa9.9□□□□□ -0.83
TNFAIP3-210ENST00000620204 DDIASQ8IXT1 998 aa9.9□□□□□ -0.83
TNFAIP3-210ENST00000620204 POC5Q8NA72 575 aa9.9□□□□□ -0.83
TNFAIP3-210ENST00000620204 RNF157Q96PX1 679 aa9.9□□□□□ -0.83
TNFAIP3-210ENST00000620204 PLEKHA5Q9HAU0 1116 aa9.9□□□□□ -0.83
TNFAIP3-210ENST00000620204 IFT80Q9P2H3 777 aaPredicted RBP9.9□□□□□ -0.83
TNFAIP3-210ENST00000620204 HACL1Q9UJ83 578 aa9.9□□□□□ -0.83
TNFAIP3-210ENST00000620204 CARD8Q9Y2G2 431 aa9.9□□□□□ -0.83
TNFAIP3-210ENST00000620204 NR5A2O00482 541 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 NFIBO00712 420 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 SNPHO15079 494 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 NRP2O60462 931 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 GUCY1B2O75343 617 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 C4BPAP04003 597 aaKnown RBP9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 POLBP06746 335 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 RAB15P59190 212 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 FPGSQ05932 587 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 ALDH16A1Q8IZ83 802 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 TRUB1Q8WWH5 349 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms