RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 BTBD1Q9H0C5 482 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 TNKS2Q9H2K2 1166 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 C6orf106Q9H6K1 298 aaPredicted RBP8.4□□□□□ -1.06
NEK3-209ENST00000618856 CAPN10Q9HC96 672 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 DLL3Q9NYJ7 618 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 LHX3Q9UBR4 397 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 SALL4Q9UJQ4 1053 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 TPX2Q9ULW0 747 aaKnown RBP8.4□□□□□ -1.06
NEK3-209ENST00000618856 HPCAL4Q9UM19 191 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 NCKAP1Q9Y2A7 1128 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 FCF1Q9Y324 198 aaKnown RBP8.4□□□□□ -1.06
NEK3-209ENST00000618856 ARHGAP42A6NI28 874 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 C1QTNF3-AMACRE9PGA6 284 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 TM4SF5O14894 197 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 BUB1O43683 1085 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 MAFKO60675 156 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 NDUFS2O75306 463 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 LEFTY1O75610 366 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 RNASEH2AO75792 299 aaKnown RBP8.39□□□□□ -1.07
NEK3-209ENST00000618856 TMCC1O94876 653 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 SERPINF2P08697 491 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 AMPD1P23109 780 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 KDELR1P24390 212 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 ITGB7P26010 798 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 ARL4AP40617 200 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 PSMD8P48556 350 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 DHPSP49366 369 aaPredicted RBP8.39□□□□□ -1.07
NEK3-209ENST00000618856 CCNHP51946 323 aaPredicted RBP8.39□□□□□ -1.07
NEK3-209ENST00000618856 CDH6P55285 790 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 NSUN2Q08J23 767 aaKnown RBP eCLIP8.39□□□□□ -1.07
NEK3-209ENST00000618856 GALNT2Q10471 571 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 CNTN1Q12860 1018 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 MESDQ14696 234 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 RFTN1Q14699 578 aaPredicted RBP8.39□□□□□ -1.07
NEK3-209ENST00000618856 SF3A2Q15428 464 aaKnown RBP8.39□□□□□ -1.07
NEK3-209ENST00000618856 MYLK3Q32MK0 819 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 ANKRD20A8PQ5CZ79 823 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 ARSIQ5FYB1 569 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 WDR45BQ5MNZ6 344 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 DCAF12L1Q5VU92 463 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 NCBP2-AS2Q69YL0 99 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 C11orf63Q6NUN7 778 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 NEK5Q6P3R8 708 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 RABEPKQ7Z6M1 372 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 CACUL1Q86Y37 369 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 LRRC49Q8IUZ0 686 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 KIAA2013Q8IYS2 634 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 HDDC3Q8N4P3 179 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 TEX26Q8N6G2 289 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 OR2T34Q8NGX1 318 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 HCAR2Q8TDS4 363 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 RAPGEF5Q92565 580 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 HSPH1Q92598 858 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 ARRDC3Q96B67 414 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 BIRC7Q96CA5 298 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 CELF6Q96J87 481 aaKnown RBP8.39□□□□□ -1.07
NEK3-209ENST00000618856 ZNF599Q96NL3 588 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 PSKH2Q96QS6 385 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 BAG1Q99933 345 aaPredicted RBP8.39□□□□□ -1.07
NEK3-209ENST00000618856 HEPHQ9BQS7 1158 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 CPEB1Q9BZB8 566 aaKnown RBP8.39□□□□□ -1.07
NEK3-209ENST00000618856 EBF2Q9HAK2 575 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 RXFP3Q9NSD7 469 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 HECAQ9UBI9 543 aaPredicted RBP8.39□□□□□ -1.07
NEK3-209ENST00000618856 IL36AQ9UHA7 158 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 TFR2Q9UP52 801 aa8.39□□□□□ -1.07
NEK3-209ENST00000618856 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.39□□□□□ -1.07
NEK3-209ENST00000618856 CACNA1EQ15878 2313 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 NUMA1Q14980 2115 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 LNP1A1A4G5 178 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 TSPAN11A1L157 253 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 PATE3B3GLJ2 98 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 CDX4O14627 284 aaPredicted RBP8.38□□□□□ -1.07
NEK3-209ENST00000618856 KHNYNO15037 678 aaKnown RBP8.38□□□□□ -1.07
NEK3-209ENST00000618856 SPINT1O43278 529 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 DAPK3O43293 454 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 AP1G1O43747 822 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 GDF9O60383 454 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 BUB1BO60566 1050 aaPredicted RBP8.38□□□□□ -1.07
NEK3-209ENST00000618856 POP4O95707 220 aaKnown RBP8.38□□□□□ -1.07
NEK3-209ENST00000618856 CR2P20023 1033 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 COMTP21964 271 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 CD27P26842 260 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 SNRPD1P62314 119 aaKnown RBP8.38□□□□□ -1.07
NEK3-209ENST00000618856 MMRN1Q13201 1228 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 SPA17Q15506 151 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 CCDC6Q16204 474 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 DUOXA1Q1HG43 343 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 SYCP2LQ5T4T6 812 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 TMCO4Q5TGY1 634 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 KIAA0895LQ68EN5 471 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 SLC9A4Q6AI14 798 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 TCEAL6Q6IPX3 200 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 NCEH1Q6PIU2 408 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 TMCO3Q6UWJ1 677 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 LEKR1Q6ZMV7 388 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 ARHGAP36Q6ZRI8 547 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 ERN2Q76MJ5 926 aaKnown RBP8.38□□□□□ -1.07
NEK3-209ENST00000618856 ARMCX6Q7L4S7 300 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 FAM124AQ86V42 546 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms