RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 TMC8Q8IU68 726 aa3.06□□□□□ -1.92
TARDBP-220ENST00000618606 SCN4BQ8IWT1 228 aa3.06□□□□□ -1.92
TARDBP-220ENST00000618606 VPS52Q8N1B4 723 aa3.06□□□□□ -1.92
TARDBP-220ENST00000618606 ANKRD44Q8N8A2 993 aa3.06□□□□□ -1.92
TARDBP-220ENST00000618606 LMNTD1Q8N9Z9 388 aa3.06□□□□□ -1.92
TARDBP-220ENST00000618606 OR1N1Q8NGS0 311 aa3.06□□□□□ -1.92
TARDBP-220ENST00000618606 SORCS1Q8WY21 1168 aa3.06□□□□□ -1.92
TARDBP-220ENST00000618606 KIAA1191Q96A73 305 aa3.06□□□□□ -1.92
TARDBP-220ENST00000618606 CCDC138Q96M89 665 aa3.06□□□□□ -1.92
TARDBP-220ENST00000618606 TEFMQ96QE5 360 aaKnown RBP3.06□□□□□ -1.92
TARDBP-220ENST00000618606 MSTO1Q9BUK6 570 aa3.06□□□□□ -1.92
TARDBP-220ENST00000618606 CADM1Q9BY67 442 aaKnown RBP3.06□□□□□ -1.92
TARDBP-220ENST00000618606 CERS4Q9HA82 394 aa3.06□□□□□ -1.92
TARDBP-220ENST00000618606 NFS1Q9Y697 457 aa3.06□□□□□ -1.92
TARDBP-220ENST00000618606 KIF1CO43896 1103 aaKnown RBP3.05□□□□□ -1.92
TARDBP-220ENST00000618606 AMD1P17707 334 aa3.05□□□□□ -1.92
TARDBP-220ENST00000618606 DPP6P42658 865 aa3.05□□□□□ -1.92
TARDBP-220ENST00000618606 LONRF1Q17RB8 773 aa3.05□□□□□ -1.92
TARDBP-220ENST00000618606 STPG1Q5TH74 334 aa3.05□□□□□ -1.92
TARDBP-220ENST00000618606 NCAPH2Q6IBW4 605 aa3.05□□□□□ -1.92
TARDBP-220ENST00000618606 RHBDF2Q6PJF5 856 aa3.05□□□□□ -1.92
TARDBP-220ENST00000618606 PGBD5Q8N414 524 aa3.05□□□□□ -1.92
TARDBP-220ENST00000618606 KCNJ9Q92806 393 aa3.05□□□□□ -1.92
TARDBP-220ENST00000618606 MUL1Q969V5 352 aa3.05□□□□□ -1.92
TARDBP-220ENST00000618606 EID2BQ96D98 161 aa3.05□□□□□ -1.92
TARDBP-220ENST00000618606 SCMH1Q96GD3 660 aa3.05□□□□□ -1.92
TARDBP-220ENST00000618606 TXNDC15Q96J42 360 aa3.05□□□□□ -1.92
TARDBP-220ENST00000618606 IFT27Q9BW83 186 aa3.05□□□□□ -1.92
TARDBP-220ENST00000618606 C1QTNF5Q9BXJ0 243 aa3.05□□□□□ -1.92
TARDBP-220ENST00000618606 NPFFR1Q9GZQ6 430 aa3.05□□□□□ -1.92
TARDBP-220ENST00000618606 CLK4Q9HAZ1 481 aaKnown RBP3.05□□□□□ -1.92
TARDBP-220ENST00000618606 MALT1Q9UDY8 824 aa3.05□□□□□ -1.92
TARDBP-220ENST00000618606 KLQ9UEF7 1012 aa3.05□□□□□ -1.92
TARDBP-220ENST00000618606 RCE1Q9Y256 329 aa3.05□□□□□ -1.92
TARDBP-220ENST00000618606 COL2A1P02458 1487 aaPredicted RBP3.04□□□□□ -1.92
TARDBP-220ENST00000618606 ANTXRLA6NF34 631 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 KDM4EB2RXH2 506 aaPredicted RBP3.04□□□□□ -1.92
TARDBP-220ENST00000618606 PARNO95453 639 aaKnown RBP3.04□□□□□ -1.92
TARDBP-220ENST00000618606 GM2AP17900 193 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 AVPR2P30518 371 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 CYP4A11Q02928 519 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 PTK2BQ14289 1009 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 GXYLT1Q4G148 440 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 XKR9Q5GH70 373 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 ATPAF1Q5TC12 328 aaPredicted RBP3.04□□□□□ -1.92
TARDBP-220ENST00000618606 TYW3Q6IPR3 259 aaKnown RBP3.04□□□□□ -1.92
TARDBP-220ENST00000618606 NFRKBQ6P4R8 1299 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 TUBA1AQ71U36 451 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 GALNT7Q86SF2 657 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 DBF4BQ8NFT6 615 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 FAM71BQ8TC56 605 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 GPT2Q8TD30 523 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 STYXQ8WUJ0 223 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 ARRDC3Q96B67 414 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 UHRF2Q96PU4 802 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 PIGSQ96S52 555 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 EPYCQ99645 322 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 TUBA1CQ9BQE3 449 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 LHPPQ9H008 270 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 EVA1AQ9H8M9 152 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 UBTD1Q9HAC8 227 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 CHST12Q9NRB3 414 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 DAPP1Q9UN19 280 aa3.04□□□□□ -1.92
TARDBP-220ENST00000618606 TARSL2A2RTX5 802 aaKnown RBP3.03□□□□□ -1.92
TARDBP-220ENST00000618606 GOLGA6L3A6NEY3 463 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 AQP12BA6NM10 295 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 CHL1O00533 1208 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 CLGNO14967 610 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 HNRNPRO43390 633 aaKnown RBP3.03□□□□□ -1.92
TARDBP-220ENST00000618606 XPNPEP2O43895 674 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 AFPP02771 609 aaKnown RBP3.03□□□□□ -1.92
TARDBP-220ENST00000618606 CYP21A2P08686 494 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 CKMT1AP12532 417 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 LYL1P12980 280 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 GYS1P13807 737 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 CHN1P15882 459 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 DGKAP23743 735 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 FMO4P31512 558 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 RPS6KA3P51812 740 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 AK2P54819 239 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 ST3GAL1Q11201 340 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 SPARCL1Q14515 664 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 SETMARQ53H47 684 aaPredicted RBP3.03□□□□□ -1.92
TARDBP-220ENST00000618606 NOL8Q76FK4 1167 aaKnown RBP3.03□□□□□ -1.92
TARDBP-220ENST00000618606 SYTL1Q8IYJ3 562 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 PTGR2Q8N8N7 351 aaPredicted RBP3.03□□□□□ -1.92
TARDBP-220ENST00000618606 SCAIQ8N9R8 606 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 OR4N2Q8NGD1 307 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 CD101Q93033 1021 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 ZNF385AQ96PM9 386 aaKnown RBP3.03□□□□□ -1.92
TARDBP-220ENST00000618606 MMP28Q9H239 520 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 GRHL1Q9NZI5 618 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 FNIP2Q9P278 1114 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 GAB2Q9UQC2 676 aa3.03□□□□□ -1.92
TARDBP-220ENST00000618606 MORC2Q9Y6X9 1032 aaPredicted RBP3.03□□□□□ -1.92
TARDBP-220ENST00000618606 GREB1LQ9C091 1923 aaPredicted RBP3.03□□□□□ -1.92
TARDBP-220ENST00000618606 C17orf100A8MU93 164 aa3.02□□□□□ -1.93
TARDBP-220ENST00000618606 FAM157AC9JC47 383 aa3.02□□□□□ -1.93
TARDBP-220ENST00000618606 CCNT1O60563 726 aaKnown RBP3.02□□□□□ -1.93
TARDBP-220ENST00000618606 VNN2O95498 520 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms