RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 UBP1Q9NZI7 540 aa16.56■□□□□ 0.24
SNAP47-213ENST00000617596 ANAPC5Q9UJX4 755 aa16.56■□□□□ 0.24
SNAP47-213ENST00000617596 TPX2Q9ULW0 747 aaKnown RBP16.56■□□□□ 0.24
SNAP47-213ENST00000617596 C2CD4DB7Z1M9 353 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 OPHN1O60890 802 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 MT-CO1P00395 513 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 PSMC3P17980 439 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 ITIH2P19823 946 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 NFKB1P19838 968 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 GDI1P31150 447 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 IRX1P78414 480 aaPredicted RBP16.55■□□□□ 0.24
SNAP47-213ENST00000617596 IFI35P80217 286 aaPredicted RBP16.55■□□□□ 0.24
SNAP47-213ENST00000617596 ZNF33AQ06730 810 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 IL10RBQ08334 325 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 CUL1Q13616 776 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 CEP85LQ5SZL2 805 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 RNASEH2BQ5TBB1 312 aaKnown RBP16.55■□□□□ 0.24
SNAP47-213ENST00000617596 YAF2Q8IY57 180 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 MAML1Q92585 1016 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 ART4Q93070 314 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 HLA-CQ95604 372 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 ELSPBP1Q96BH3 223 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 LRRC45Q96CN5 670 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 LMLNQ96KR4 655 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 IL12RB2Q99665 862 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 GORASP1Q9BQQ3 440 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 ECT2Q9H8V3 914 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 NT5MQ9NPB1 228 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 WHRNQ9P202 907 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 KIAA1522Q9P206 1035 aaPredicted RBP16.55■□□□□ 0.24
SNAP47-213ENST00000617596 VPS51Q9UID3 782 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 HMGB1P1B2RPK0 211 aaPredicted RBP16.55■□□□□ 0.24
SNAP47-213ENST00000617596 MUSKO15146 869 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 MTSS1O43312 755 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 ZMPSTE24O75844 475 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 NEBLO76041 1014 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 TMEM63AO94886 807 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 CD160O95971 181 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 APRTP07741 180 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 CTSOP43234 321 aaPredicted RBP16.55■□□□□ 0.24
SNAP47-213ENST00000617596 SMAD4Q13485 552 aaKnown RBP16.55■□□□□ 0.24
SNAP47-213ENST00000617596 OLIG2Q13516 323 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 LBRQ14739 615 aaKnown RBP16.55■□□□□ 0.24
SNAP47-213ENST00000617596 PLEKHG6Q3KR16 790 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 FUT11Q495W5 492 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 MARC1Q5VT66 337 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 HIBCHQ6NVY1 386 aaPredicted RBP16.55■□□□□ 0.24
SNAP47-213ENST00000617596 IQCKQ8N0W5 287 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 PGBD5Q8N414 524 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 ZNF473Q8WTR7 871 aaKnown RBP16.55■□□□□ 0.24
SNAP47-213ENST00000617596 ATP2A3Q93084 1043 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 MARK1Q9P0L2 795 aa16.55■□□□□ 0.24
SNAP47-213ENST00000617596 FARP1Q9Y4F1 1045 aaPredicted RBP16.55■□□□□ 0.24
SNAP47-213ENST00000617596 DENND4AQ7Z401 1863 aa16.54■□□□□ 0.24
SNAP47-213ENST00000617596 K7ERQ8 282 aa16.54■□□□□ 0.24
SNAP47-213ENST00000617596 NFATC1O95644 943 aa16.54■□□□□ 0.24
SNAP47-213ENST00000617596 ADH1CP00326 375 aa16.54■□□□□ 0.24
SNAP47-213ENST00000617596 MMP13P45452 471 aa16.54■□□□□ 0.24
SNAP47-213ENST00000617596 SLC6A11P48066 632 aa16.54■□□□□ 0.24
SNAP47-213ENST00000617596 ITKQ08881 620 aa16.54■□□□□ 0.24
SNAP47-213ENST00000617596 HNRNPDQ14103 355 aaKnown RBP16.54■□□□□ 0.24
SNAP47-213ENST00000617596 SPARCL1Q14515 664 aa16.54■□□□□ 0.24
SNAP47-213ENST00000617596 SNCBQ16143 134 aa16.54■□□□□ 0.24
SNAP47-213ENST00000617596 ZNF783Q6ZMS7 281 aa16.54■□□□□ 0.24
SNAP47-213ENST00000617596 RNF135Q8IUD6 432 aa16.54■□□□□ 0.24
SNAP47-213ENST00000617596 TSEN2Q8NCE0 465 aaKnown RBP16.54■□□□□ 0.24
SNAP47-213ENST00000617596 SPATA22Q8NHS9 363 aa16.54■□□□□ 0.24
SNAP47-213ENST00000617596 EXOC2Q96KP1 924 aa16.54■□□□□ 0.24
SNAP47-213ENST00000617596 RPL10LQ96L21 214 aaKnown RBP16.54■□□□□ 0.24
SNAP47-213ENST00000617596 EPS15L1Q9UBC2 864 aa16.54■□□□□ 0.24
SNAP47-213ENST00000617596 UBA2Q9UBT2 640 aaPredicted RBP16.54■□□□□ 0.24
SNAP47-213ENST00000617596 MT-CYBP00156 380 aaPredicted RBP16.53■□□□□ 0.24
SNAP47-213ENST00000617596 RENBPP51606 427 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 TFF2Q03403 129 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 HTR4Q13639 388 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 GAB4Q2WGN9 574 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 C11orf91Q3C1V1 193 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 PITRM1Q5JRX3 1037 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 TMCO4Q5TGY1 634 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 GPR153Q6NV75 609 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 PDCD7Q8N8D1 485 aaKnown RBP16.53■□□□□ 0.24
SNAP47-213ENST00000617596 NAT8LQ8N9F0 302 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 NSMCE1Q8WV22 266 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 PRCCQ92733 491 aaPredicted RBP16.53■□□□□ 0.24
SNAP47-213ENST00000617596 E2F7Q96AV8 911 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 TRMT61BQ9BVS5 477 aaKnown RBP16.53■□□□□ 0.24
SNAP47-213ENST00000617596 GBA3Q9H227 469 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 PRDM6Q9NQX0 595 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 PIH1D1Q9NWS0 290 aaKnown RBP16.53■□□□□ 0.24
SNAP47-213ENST00000617596 BCCIPQ9P287 314 aaKnown RBP eCLIP16.53■□□□□ 0.24
SNAP47-213ENST00000617596 MYO18AQ92614 2054 aaKnown RBP16.53■□□□□ 0.24
SNAP47-213ENST00000617596 E7EVH7 732 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 TULP3O75386 442 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 ECI2O75521 394 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 PABPC1P11940 636 aaKnown RBP16.53■□□□□ 0.24
SNAP47-213ENST00000617596 EZRP15311 586 aaKnown RBP16.53■□□□□ 0.24
SNAP47-213ENST00000617596 GRIA1P42261 906 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 STK19P49842 368 aaPredicted RBP16.53■□□□□ 0.24
SNAP47-213ENST00000617596 RUNX3Q13761 415 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 KCNJ11Q14654 390 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms