RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 MAGEF1Q9HAY2 307 aa4.87□□□□□ -1.63
CUL3-216ENST00000617432 APOBEC3GQ9HC16 384 aaKnown RBP4.87□□□□□ -1.63
CUL3-216ENST00000617432 RBM12Q9NTZ6 932 aaKnown RBP4.87□□□□□ -1.63
CUL3-216ENST00000617432 POLR3BQ9NW08 1133 aaPredicted RBP4.87□□□□□ -1.63
CUL3-216ENST00000617432 DMAC2Q9NW81 257 aa4.87□□□□□ -1.63
CUL3-216ENST00000617432 UCKL1Q9NWZ5 548 aa4.87□□□□□ -1.63
CUL3-216ENST00000617432 GDAP2Q9NXN4 497 aa4.87□□□□□ -1.63
CUL3-216ENST00000617432 ITGA11Q9UKX5 1188 aa4.87□□□□□ -1.63
CUL3-216ENST00000617432 KIF26AQ9ULI4 1882 aaPredicted RBP4.87□□□□□ -1.63
CUL3-216ENST00000617432 MAGED2Q9UNF1 606 aaPredicted RBP4.87□□□□□ -1.63
CUL3-216ENST00000617432 R4GN57 208 aa4.87□□□□□ -1.63
CUL3-216ENST00000617432 USP34Q70CQ2 3546 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 NUP210Q8TEM1 1887 aaPredicted RBP4.86□□□□□ -1.63
CUL3-216ENST00000617432 ZDBF2Q9HCK1 2354 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 C2orf78A6NCI8 922 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 AQP7O14520 342 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 ECI2O75521 394 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 AKAP3O75969 853 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 CLSTN1O94985 981 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 LDHAP00338 332 aaKnown RBP4.86□□□□□ -1.63
CUL3-216ENST00000617432 TNNC2P02585 160 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 C4BPAP04003 597 aaKnown RBP4.86□□□□□ -1.63
CUL3-216ENST00000617432 PYGMP11217 842 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 ARSAP15289 507 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 TNNI1P19237 187 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 BDNFP23560 247 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 ABCD1P33897 745 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 ALDH1A3P47895 512 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 PGFP49763 221 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 ZXDBP98169 803 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 AMPD3Q01432 767 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 PPP3CAQ08209 521 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 DMWDQ09019 674 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 BIRC3Q13489 604 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 ANGPT1Q15389 498 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 ZCWPW2Q504Y3 356 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 FIGNQ5HY92 759 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 CYP4A22Q5TCH4 519 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 YOD1Q5VVQ6 348 aaPredicted RBP4.86□□□□□ -1.63
CUL3-216ENST00000617432 ATL3Q6DD88 541 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 Q6ZS52 159 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 MTSS1LQ765P7 747 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 ARID3BQ8IVW6 561 aaPredicted RBP4.86□□□□□ -1.63
CUL3-216ENST00000617432 ZC3H7AQ8IWR0 971 aaKnown RBP4.86□□□□□ -1.63
CUL3-216ENST00000617432 C12orf56Q8IXR9 622 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 THEM5Q8N1Q8 247 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 ELMOD1Q8N336 334 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 MAB21L3Q8N8X9 362 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 ENGASEQ8NFI3 743 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 PARD3BQ8TEW8 1205 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 ATOH1Q92858 354 aaPredicted RBP4.86□□□□□ -1.63
CUL3-216ENST00000617432 SMARCD2Q92925 531 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 PCED1BQ96HM7 432 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 C16orf92Q96LL3 132 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 CYP2S1Q96SQ9 504 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 MMS19Q96T76 1030 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 MNTQ99583 582 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 LRRC27Q9C0I9 530 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 ZFP14Q9HCL3 533 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 LTB4R2Q9NPC1 389 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 GTSE1Q9NYZ3 720 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 WNT16Q9UBV4 365 aa4.86□□□□□ -1.63
CUL3-216ENST00000617432 NDRG2Q9UN36 371 aaKnown RBP4.86□□□□□ -1.63
CUL3-216ENST00000617432 PTPRDP23468 1912 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 KANSL1LA0AUZ9 987 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 F8VP50 259 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 ZNF197O14709 1029 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 HUS1O60921 280 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 BEST1O76090 585 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 NOL4O94818 638 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 CALCAP01258 141 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 HLA-DRAP01903 254 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 AMY2AP04746 511 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 CCDC130P13994 396 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 AMY2BP19961 511 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 WARSP23381 471 aaKnown RBP4.85□□□□□ -1.63
CUL3-216ENST00000617432 NR2F2P24468 414 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 CCNE1P24864 410 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 ERCC5P28715 1186 aaPredicted RBP4.85□□□□□ -1.63
CUL3-216ENST00000617432 PNPLA4P41247 253 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 GCLMP48507 274 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 CLCN5P51795 746 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 JAM2P57087 298 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 STARD6P59095 220 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 MYL7Q01449 175 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 TSPY1Q01534 308 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 POU5F1Q01860 360 aaKnown RBP4.85□□□□□ -1.63
CUL3-216ENST00000617432 CRY1Q16526 586 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 KANK2Q63ZY3 851 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 GRAMD4Q6IC98 578 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 FAM171BQ6P995 826 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 FAM111BQ6SJ93 734 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 LRSAM1Q6UWE0 723 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 PAQR9Q6ZVX9 377 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 STXBP4Q6ZWJ1 553 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 GPRIN1Q7Z2K8 1008 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 SPATA2LQ8IUW3 424 aaPredicted RBP4.85□□□□□ -1.63
CUL3-216ENST00000617432 SFTPA1Q8IWL2 248 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 ZMIZ2Q8NF64 920 aa4.85□□□□□ -1.63
CUL3-216ENST00000617432 OR6B3Q8NGW1 331 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms