RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 HS6ST2Q96MM7 605 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 YY1AP1Q9H869 796 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 STAP2Q9UGK3 403 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 CAB39Q9Y376 341 aaPredicted RBP3.4□□□□□ -1.86
LPP-220ENST00000617246 ZNF780BQ9Y6R6 833 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 KCNK5O95279 499 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 TUBB4AP04350 444 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 EIF4A3P38919 411 aaKnown RBP3.4□□□□□ -1.87
LPP-220ENST00000617246 TMC3Q7Z5M5 1100 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 TMX3Q96JJ7 454 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 TPSD1Q9BZJ3 242 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 RIBC2Q9H4K1 309 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 GID8Q9NWU2 228 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 BARHL2Q9NY43 387 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 GJE1A6NN92 205 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 MCIDASD6RGH6 385 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 BRINP1O60477 761 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 MED24O75448 989 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 PLEKHA8P1O95397 391 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 BAG2O95816 211 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 FAM107AO95990 144 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 SLC7A1P30825 629 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 PLOD1Q02809 727 aaPredicted RBP3.4□□□□□ -1.87
LPP-220ENST00000617246 PDE1CQ14123 709 aaPredicted RBP3.4□□□□□ -1.87
LPP-220ENST00000617246 MTHFD1LQ6UB35 978 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 OR6P1Q8NGX9 317 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 CAPZA3Q96KX2 299 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 TIMMDC1Q9NPL8 285 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 KCNK4Q9NYG8 393 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 FBXO9Q9UK97 447 aaPredicted RBP3.4□□□□□ -1.87
LPP-220ENST00000617246 CYP8B1Q9UNU6 501 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 INPP5BP32019 993 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 OR1D2P34982 312 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 AIF1P55008 147 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 SKOR1P84550 965 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 TARBP2Q15633 366 aaKnown RBP3.4□□□□□ -1.87
LPP-220ENST00000617246 SNCBQ16143 134 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 KCTD18Q6PI47 426 aaPredicted RBP3.4□□□□□ -1.87
LPP-220ENST00000617246 ABHD11Q8NFV4 315 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 CLHC1Q8NHS4 586 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 PRICKLE1Q96MT3 831 aaPredicted RBP3.4□□□□□ -1.87
LPP-220ENST00000617246 RANBP17Q9H2T7 1088 aaKnown RBP3.4□□□□□ -1.87
LPP-220ENST00000617246 SETD4Q9NVD3 440 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 SUFUQ9UMX1 484 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 LZTS1Q9Y250 596 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 TNPO3Q9Y5L0 923 aaKnown RBP3.4□□□□□ -1.87
LPP-220ENST00000617246 ROR1Q01973 937 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 PTGES3Q15185 160 aaKnown RBP3.4□□□□□ -1.87
LPP-220ENST00000617246 MOXD1Q6UVY6 613 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 OR10H5Q8NGA6 315 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 ARHGEF2Q92974 986 aaKnown RBP3.4□□□□□ -1.87
LPP-220ENST00000617246 MYOCQ99972 504 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 PARVAQ9NVD7 372 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 PTGFRNQ9P2B2 879 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.4□□□□□ -1.87
LPP-220ENST00000617246 TRIM27P14373 513 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 CD46P15529 392 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 MINDY4Q4G0A6 757 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 LONP2Q86WA8 852 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 OVCA2Q8WZ82 227 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 TRMT61AQ96FX7 289 aaKnown RBP3.4□□□□□ -1.87
LPP-220ENST00000617246 ITGB1BP2Q9UKP3 347 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 OR10H1Q9Y4A9 318 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 A0A0G2JMZ2 1700 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 ZBTB14O43829 449 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 DNAJC8O75937 253 aaPredicted RBP3.4□□□□□ -1.87
LPP-220ENST00000617246 UMPSP11172 480 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 UBASH3AP57075 661 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 FAM98BQ52LJ0 330 aaKnown RBP3.4□□□□□ -1.87
LPP-220ENST00000617246 ALS2CLQ60I27 953 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 ABHD13Q7L211 337 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 PXKQ7Z7A4 578 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 KIF18AQ8NI77 898 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 MED8Q96G25 268 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 EMILIN3Q9NT22 766 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 TCF20Q9UGU0 1960 aaKnown RBP3.4□□□□□ -1.87
LPP-220ENST00000617246 BMPR2Q13873 1038 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 MELKQ14680 651 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 MAPK14Q16539 360 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 SYNPOQ8N3V7 929 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 TTLQ8NG68 377 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 TIMD4Q96H15 378 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 ZNF556Q9HAH1 456 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 KCNH1O95259 989 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 CATP04040 527 aaKnown RBP3.4□□□□□ -1.87
LPP-220ENST00000617246 IFNAR1P17181 557 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 SRP14P37108 136 aaKnown RBP3.4□□□□□ -1.87
LPP-220ENST00000617246 COPS2P61201 443 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 ING5Q8WYH8 240 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 KCTD13Q8WZ19 329 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 UPF3AQ9H1J1 476 aaKnown RBP3.4□□□□□ -1.87
LPP-220ENST00000617246 HIPK2Q9H2X6 1198 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 RIC8BQ9NVN3 520 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 MFHAS1Q9Y4C4 1052 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 GMNCA6NCL1 334 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 SLC28A1O00337 649 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 IRAK2O43187 625 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 PAEPP09466 180 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 ACTR3P61158 418 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 PSMC1P62191 440 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms