RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 KLF11O14901 512 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 ZW10O43264 779 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 PLIN3O60664 434 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 MGAT1P26572 445 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 ANKRD26P1Q6NSI1 321 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 CHSY3Q70JA7 882 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 P2RY8Q86VZ1 359 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 OMDQ99983 421 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 TPRKBQ9Y3C4 175 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 SESN1Q9Y6P5 492 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 OR6C70A6NIJ9 312 aa13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 FADS2O95864 444 aaKnown RBP13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 CCNE2O96020 404 aa13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 CEACAM7Q14002 265 aa13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 SIX1Q15475 284 aaPredicted RBP13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 LRRC8DQ7L1W4 858 aa13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 RALGPS2Q86X27 583 aaPredicted RBP13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 NODALQ96S42 347 aa13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 HERPUD2Q9BSE4 406 aa13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 THUMPD3Q9BV44 507 aaKnown RBP13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 OR2B2Q9GZK3 357 aa13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 TMEM216Q9P0N5 145 aa13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 MYH11P35749 1972 aa13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 A0A1W2PQ67 120 aa13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 K7ERI5 159 aa13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 PAPSS1O43252 624 aaPredicted RBP13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 GDF11O95390 407 aa13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 ITKQ08881 620 aa13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 PDZK1Q5T2W1 519 aa13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 UNC5AQ6ZN44 842 aa13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 THAP5Q7Z6K1 395 aa13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 ZNF540Q8NDQ6 660 aa13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 HSFY1Q96LI6 401 aa13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 MTMR4Q9NYA4 1195 aa13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 VTI1BQ9UEU0 232 aa13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 PTBP2Q9UKA9 531 aaKnown RBP13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 MINPP1Q9UNW1 487 aa13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 SPATA31D1Q6ZQQ2 1576 aa13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 ARHGAP23Q9P227 1491 aa13.71□□□□□ -0.21
PPP4R3B-205ENST00000616288 XYLBO75191 536 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 TPPPO94811 219 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 CSH1P0DML2 217 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 CSH2P0DML3 217 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 GTF2E2P29084 291 aaKnown RBP13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 PIGFQ07326 219 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 ORC1Q13415 861 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 MTERF2Q49AM1 385 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 ERAP2Q6P179 960 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 LUZP2Q86TE4 346 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 MTMR12Q9C0I1 747 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 ANKMY1Q9P2S6 941 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 NDUFAF1Q9Y375 327 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 MYO5AQ9Y4I1 1855 aaKnown RBP13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 TTC34A8MYJ7 566 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 RECQL5O94762 991 aaPredicted RBP13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 NCAM1P13591 858 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 HNRNPLP14866 589 aaKnown RBP eCLIP13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 SLC7A1P30825 629 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 MS4A2Q01362 244 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 NKX1-1Q15270 411 aaPredicted RBP13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 CCDC142Q17RM4 750 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 ZNF699Q32M78 642 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 CCDC58Q4VC31 144 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 KLHL12Q53G59 568 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 PSD4Q8NDX1 1056 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 COPS4Q9BT78 406 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 TRIT1Q9H3H1 467 aaKnown RBP13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 MAT2BQ9NZL9 334 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 UGT2A1Q9Y4X1 527 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 MYH3P11055 1940 aa13.71□□□□□ -0.22
PPP4R3B-205ENST00000616288 ISPDA4D126 451 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 SAGE2PA6NJ88 616 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 INO80B-WBP1J3KQ70 363 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 BCAS2O75934 225 aaPredicted RBP13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 GNAO1P09471 354 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 ZBTB48P10074 688 aaPredicted RBP13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 FGFR2P21802 821 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 NPTX2P47972 431 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 RGS7P49802 495 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 VBP1P61758 197 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 CUL2Q13617 745 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 STK11Q15831 433 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 HDDC2Q7Z4H3 204 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 FAM20CQ8IXL6 584 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 OR8H3Q8N146 312 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 CAMKK1Q8N5S9 505 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 CCDC120Q96HB5 630 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 INO80BQ9C086 356 aaPredicted RBP13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 ZNF219Q9P2Y4 722 aaPredicted RBP13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 FNDC3AQ9Y2H6 1198 aaKnown RBP13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 RAP2CQ9Y3L5 183 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 MICAL3Q7RTP6 2002 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 NID2Q14112 1375 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 EFCAB10A6NFE3 127 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 KMOO15229 486 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 H2AFYO75367 372 aaKnown RBP13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 APOA4P06727 396 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 NPR1P16066 1061 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms