RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 KRT81Q14533 505 aa17.02■□□□□ 0.32
CBWD3-211ENST00000615061 HADHQ16836 314 aaKnown RBP17.02■□□□□ 0.32
CBWD3-211ENST00000615061 SYCP2LQ5T4T6 812 aa17.02■□□□□ 0.32
CBWD3-211ENST00000615061 ATXN7L2Q5T6C5 722 aaPredicted RBP17.02■□□□□ 0.32
CBWD3-211ENST00000615061 AGBL4Q5VU57 503 aa17.02■□□□□ 0.32
CBWD3-211ENST00000615061 RAD9BQ6WBX8 426 aa17.02■□□□□ 0.32
CBWD3-211ENST00000615061 RHOT2Q8IXI1 618 aa17.02■□□□□ 0.32
CBWD3-211ENST00000615061 CCDC170Q8IYT3 715 aa17.02■□□□□ 0.32
CBWD3-211ENST00000615061 DNASE2BQ8WZ79 361 aa17.02■□□□□ 0.32
CBWD3-211ENST00000615061 VOPP1Q96AW1 172 aa17.02■□□□□ 0.32
CBWD3-211ENST00000615061 ARRDC3Q96B67 414 aa17.02■□□□□ 0.32
CBWD3-211ENST00000615061 CCDC114Q96M63 670 aa17.02■□□□□ 0.32
CBWD3-211ENST00000615061 PDFQ9HBH1 243 aa17.02■□□□□ 0.32
CBWD3-211ENST00000615061 HECAQ9UBI9 543 aaPredicted RBP17.02■□□□□ 0.32
CBWD3-211ENST00000615061 IL36AQ9UHA7 158 aa17.02■□□□□ 0.32
CBWD3-211ENST00000615061 INTUQ9ULD6 942 aa17.02■□□□□ 0.32
CBWD3-211ENST00000615061 FZD4Q9ULV1 537 aa17.02■□□□□ 0.32
CBWD3-211ENST00000615061 PCDHA13Q9Y5I0 950 aa17.02■□□□□ 0.32
CBWD3-211ENST00000615061 TRPM6Q9BX84 2022 aa17.02■□□□□ 0.32
CBWD3-211ENST00000615061 PCDH15Q96QU1 1955 aa17.02■□□□□ 0.32
CBWD3-211ENST00000615061 C1QTNF3-AMACRE9PGA6 284 aa17.02■□□□□ 0.31
CBWD3-211ENST00000615061 KHNYNO15037 678 aaKnown RBP17.02■□□□□ 0.31
CBWD3-211ENST00000615061 CFIP05156 583 aa17.02■□□□□ 0.31
CBWD3-211ENST00000615061 IGHV4-34P06331 123 aa17.02■□□□□ 0.31
CBWD3-211ENST00000615061 ZNF135P52742 658 aaPredicted RBP17.02■□□□□ 0.31
CBWD3-211ENST00000615061 GEMIN4P57678 1058 aaKnown RBP17.02■□□□□ 0.31
CBWD3-211ENST00000615061 RSPO4Q2I0M5 234 aaPredicted RBP17.02■□□□□ 0.31
CBWD3-211ENST00000615061 WDR45BQ5MNZ6 344 aa17.02■□□□□ 0.31
CBWD3-211ENST00000615061 FAM46CQ5VWP2 391 aa17.02■□□□□ 0.31
CBWD3-211ENST00000615061 RYBPQ8N488 228 aaPredicted RBP17.02■□□□□ 0.31
CBWD3-211ENST00000615061 ZCCHC9Q8N567 271 aaKnown RBP17.02■□□□□ 0.31
CBWD3-211ENST00000615061 FAM131CQ96AQ9 280 aa17.02■□□□□ 0.31
CBWD3-211ENST00000615061 ISG20Q96AZ6 181 aaKnown RBP17.02■□□□□ 0.31
CBWD3-211ENST00000615061 EXOC2Q96KP1 924 aa17.02■□□□□ 0.31
CBWD3-211ENST00000615061 ANP32EQ9BTT0 268 aa17.02■□□□□ 0.31
CBWD3-211ENST00000615061 ZDHHC6Q9H6R6 413 aa17.02■□□□□ 0.31
CBWD3-211ENST00000615061 DONSONQ9NYP3 566 aa17.02■□□□□ 0.31
CBWD3-211ENST00000615061 EPN1Q9Y6I3 576 aaPredicted RBP17.02■□□□□ 0.31
CBWD3-211ENST00000615061 ANKRD36A6QL64 1941 aa17.01■□□□□ 0.31
CBWD3-211ENST00000615061 CXorf51AA0A1B0GTR3 108 aa17.01■□□□□ 0.31
CBWD3-211ENST00000615061 ZSCAN5CA6NGD5 496 aaPredicted RBP17.01■□□□□ 0.31
CBWD3-211ENST00000615061 ARHGAP42A6NI28 874 aa17.01■□□□□ 0.31
CBWD3-211ENST00000615061 PRAMEF11O60813 436 aa17.01■□□□□ 0.31
CBWD3-211ENST00000615061 CDC25BP30305 580 aa17.01■□□□□ 0.31
CBWD3-211ENST00000615061 MAN1A1P33908 653 aa17.01■□□□□ 0.31
CBWD3-211ENST00000615061 CYLC1P35663 651 aaPredicted RBP17.01■□□□□ 0.31
CBWD3-211ENST00000615061 DPYSL3Q14195 570 aa17.01■□□□□ 0.31
CBWD3-211ENST00000615061 CYTH1Q15438 398 aa17.01■□□□□ 0.31
CBWD3-211ENST00000615061 TMTC1Q8IUR5 882 aa17.01■□□□□ 0.31
CBWD3-211ENST00000615061 TMIEQ8NEW7 156 aa17.01■□□□□ 0.31
CBWD3-211ENST00000615061 OR2AP1Q8NGE2 309 aa17.01■□□□□ 0.31
CBWD3-211ENST00000615061 FAM71BQ8TC56 605 aa17.01■□□□□ 0.31
CBWD3-211ENST00000615061 HEPHQ9BQS7 1158 aa17.01■□□□□ 0.31
CBWD3-211ENST00000615061 CALN1Q9BXU9 219 aa17.01■□□□□ 0.31
CBWD3-211ENST00000615061 GOLPH3Q9H4A6 298 aa17.01■□□□□ 0.31
CBWD3-211ENST00000615061 EBF2Q9HAK2 575 aa17.01■□□□□ 0.31
CBWD3-211ENST00000615061 NCOR2Q9Y618 2525 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 RCCD1A6NED2 376 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 NDUFA10O95299 355 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 PRNPP04156 253 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 TAS2R38P59533 333 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 PPP2CBP62714 309 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 PPP2CAP67775 309 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 SFSWAPQ12872 951 aaKnown RBP17■□□□□ 0.31
CBWD3-211ENST00000615061 SPA17Q15506 151 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 DUOXA1Q1HG43 343 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 INO80DQ53TQ3 878 aaPredicted RBP17■□□□□ 0.31
CBWD3-211ENST00000615061 PIP5KL1Q5T9C9 394 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 SLC23A3Q6PIS1 610 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 TMCO3Q6UWJ1 677 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 TMEM139Q8IV31 216 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 KCTD6Q8NC69 237 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 OR2T34Q8NGX1 318 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 C1orf216Q8TAB5 229 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 ORAI3Q9BRQ5 295 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 EDEM2Q9BV94 578 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 CAPN10Q9HC96 672 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 UBA2Q9UBT2 640 aaPredicted RBP17■□□□□ 0.31
CBWD3-211ENST00000615061 EVLQ9UI08 416 aaPredicted RBP17■□□□□ 0.31
CBWD3-211ENST00000615061 REXO2Q9Y3B8 237 aaKnown RBP17■□□□□ 0.31
CBWD3-211ENST00000615061 TP53BP1Q12888 1972 aaPredicted RBP17■□□□□ 0.31
CBWD3-211ENST00000615061 TBC1D3DA0A087WVF3 549 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 TBC1D3IA0A087WXS9 549 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 TBC1D3EA0A087X179 549 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 TBC1D3KA0A087X1G2 549 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 TBC1D3FA6NER0 549 aaPredicted RBP17■□□□□ 0.31
CBWD3-211ENST00000615061 LRRC72A6NJI9 287 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 TBC1D3LB9A6J9 549 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 KRIT1O00522 736 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 GSRP00390 522 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 TBC1D3HP0C7X1 549 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 HOXD12P35452 270 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 ARHGAP25P42331 645 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 RHOAP61586 193 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 SNRPD1P62314 119 aaKnown RBP17■□□□□ 0.31
CBWD3-211ENST00000615061 KIAA0895LQ68EN5 471 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 TBC1D3GQ6DHY5 549 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 TBC1D3CQ6IPX1 549 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 TBC1D3Q8IZP1 549 aaPredicted RBP17■□□□□ 0.31
CBWD3-211ENST00000615061 ACRBPQ8NEB7 543 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms