RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 SEMA4FO95754 770 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 PEX11BO96011 259 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 DNTTP04053 509 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 ZNF806P0C7X5 589 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 RHOQP17081 205 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 ELF2Q15723 593 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 CSRP2Q16527 193 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 AASDHQ4L235 1098 aaPredicted RBP5.8□□□□□ -1.48
CPNE3-208ENST00000614678 RFLNAQ6ZTI6 216 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 PARS2Q7L3T8 475 aaKnown RBP5.8□□□□□ -1.48
CPNE3-208ENST00000614678 GATAD2AQ86YP4 633 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 CAMK1DQ8IU85 385 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 PQLC3Q8N755 202 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 WFIKKN2Q8TEU8 576 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 NTAN1Q96AB6 310 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 RNF25Q96BH1 459 aaPredicted RBP5.8□□□□□ -1.48
CPNE3-208ENST00000614678 DDX50Q9BQ39 737 aaKnown RBP5.8□□□□□ -1.48
CPNE3-208ENST00000614678 IER2Q9BTL4 223 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 EDEM2Q9BV94 578 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 TRIM62Q9BVG3 475 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 EDEM3Q9BZQ6 932 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 PABPC3Q9H361 631 aaKnown RBP5.8□□□□□ -1.48
CPNE3-208ENST00000614678 PDFQ9HBH1 243 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 HECAQ9UBI9 543 aaPredicted RBP5.8□□□□□ -1.48
CPNE3-208ENST00000614678 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.8□□□□□ -1.48
CPNE3-208ENST00000614678 SNX11Q9Y5W9 270 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 TBC1D3DA0A087WVF3 549 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 TBC1D3IA0A087WXS9 549 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 TBC1D3EA0A087X179 549 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 TBC1D3KA0A087X1G2 549 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 ILVBLA1L0T0 632 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 ANKRD62A6NC57 917 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 TBC1D3FA6NER0 549 aaPredicted RBP5.8□□□□□ -1.48
CPNE3-208ENST00000614678 TBC1D3LB9A6J9 549 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 PRPSAP2O60256 369 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 TBC1D3HP0C7X1 549 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 CHRNA3P32297 505 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 NOP2P46087 812 aaKnown RBP5.8□□□□□ -1.48
CPNE3-208ENST00000614678 CDH6P55285 790 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 SNX16P57768 344 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 DYNLT1P63172 113 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 SERINC3Q13530 473 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 DPYSL3Q14195 570 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 STPG1Q5TH74 334 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 TBC1D3GQ6DHY5 549 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 TBC1D3CQ6IPX1 549 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 NUDT18Q6ZVK8 323 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 SFTPA2Q8IWL1 248 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 TBC1D3Q8IZP1 549 aaPredicted RBP5.8□□□□□ -1.48
CPNE3-208ENST00000614678 DCAF4L2Q8NA75 395 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 HAUS1Q96CS2 278 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 VCPIP1Q96JH7 1222 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 CCDC42Q96M95 316 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 OMDQ99983 421 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 CALN1Q9BXU9 219 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 RRN3Q9NYV6 651 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 PPARGC1AQ9UBK2 798 aaKnown RBP5.8□□□□□ -1.48
CPNE3-208ENST00000614678 LHX3Q9UBR4 397 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 PAXBP1Q9Y5B6 917 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 EDDM13A0A1B0GTR0 161 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 C3orf70A6NLC5 250 aaPredicted RBP5.8□□□□□ -1.48
CPNE3-208ENST00000614678 METTL12A8MUP2 240 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 TM4SF5O14894 197 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 MCF2LO15068 1137 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 SDC3O75056 442 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 NDUFS2O75306 463 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 ID4P47928 161 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 ARSEP51690 589 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 GRIK2Q13002 908 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 MAPK8IP2Q13387 824 aaPredicted RBP5.8□□□□□ -1.48
CPNE3-208ENST00000614678 ELAVL3Q14576 367 aaKnown RBP5.8□□□□□ -1.48
CPNE3-208ENST00000614678 KIF19Q2TAC6 998 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 ARL13BQ3SXY8 428 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 C6orf118Q5T5N4 469 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 ZNF776Q68DI1 518 aaPredicted RBP5.8□□□□□ -1.48
CPNE3-208ENST00000614678 TRMT11Q7Z4G4 463 aaKnown RBP5.8□□□□□ -1.48
CPNE3-208ENST00000614678 SETD3Q86TU7 594 aaPredicted RBP5.8□□□□□ -1.48
CPNE3-208ENST00000614678 KCNV2Q8TDN2 545 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 ZNF830Q96NB3 372 aaPredicted RBP5.8□□□□□ -1.48
CPNE3-208ENST00000614678 LGMNQ99538 433 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 BTBD1Q9H0C5 482 aa5.8□□□□□ -1.48
CPNE3-208ENST00000614678 SPAARA0A1B0GVQ0 90 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 POM121BA6NF01 834 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 TIMM44O43615 452 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 RNF8O76064 485 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 PAK4O96013 591 aaPredicted RBP5.79□□□□□ -1.48
CPNE3-208ENST00000614678 NCBP2-AS2Q69YL0 99 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 KDELC2Q7Z4H8 507 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 TSC1Q92574 1164 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 KLHL32Q96NJ5 620 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 WRAP53Q9BUR4 548 aaKnown RBP5.79□□□□□ -1.48
CPNE3-208ENST00000614678 CAPN10Q9HC96 672 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 TM9SF3Q9HD45 589 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 SLC25A13Q9UJS0 675 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 ITPR1Q14643 2758 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 RP1P56715 2156 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 MEI4A8MW99 385 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 MYO1FO00160 1098 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 MOCS3O95396 460 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 SRPRAP08240 638 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms