RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 GRIK2Q13002 908 aa12.9□□□□□ -0.34
CSTF1-208ENST00000613138 SERINC3Q13530 473 aa12.9□□□□□ -0.34
CSTF1-208ENST00000613138 DPYSQ14117 519 aa12.9□□□□□ -0.34
CSTF1-208ENST00000613138 PUM1Q14671 1186 aaKnown RBP eCLIP12.9□□□□□ -0.34
CSTF1-208ENST00000613138 CYTH1Q15438 398 aa12.9□□□□□ -0.34
CSTF1-208ENST00000613138 CARD16Q5EG05 197 aa12.9□□□□□ -0.34
CSTF1-208ENST00000613138 WDR45BQ5MNZ6 344 aa12.9□□□□□ -0.34
CSTF1-208ENST00000613138 RETSATQ6NUM9 610 aa12.9□□□□□ -0.34
CSTF1-208ENST00000613138 POLNQ7Z5Q5 900 aa12.9□□□□□ -0.34
CSTF1-208ENST00000613138 RYBPQ8N488 228 aaPredicted RBP12.9□□□□□ -0.34
CSTF1-208ENST00000613138 CADM4Q8NFZ8 388 aa12.9□□□□□ -0.34
CSTF1-208ENST00000613138 SLC6A18Q96N87 628 aa12.9□□□□□ -0.34
CSTF1-208ENST00000613138 NUSAP1Q9BXS6 441 aaKnown RBP12.9□□□□□ -0.34
CSTF1-208ENST00000613138 CATSPERBQ9H7T0 1116 aa12.9□□□□□ -0.34
CSTF1-208ENST00000613138 SGK2Q9HBY8 427 aa12.9□□□□□ -0.34
CSTF1-208ENST00000613138 PCDH18Q9HCL0 1135 aa12.9□□□□□ -0.34
CSTF1-208ENST00000613138 TM9SF3Q9HD45 589 aa12.9□□□□□ -0.34
CSTF1-208ENST00000613138 LHX3Q9UBR4 397 aa12.9□□□□□ -0.34
CSTF1-208ENST00000613138 GGT7Q9UJ14 662 aa12.9□□□□□ -0.34
CSTF1-208ENST00000613138 SLC6A14Q9UN76 642 aa12.9□□□□□ -0.34
CSTF1-208ENST00000613138 NCKAP1Q9Y2A7 1128 aa12.9□□□□□ -0.34
CSTF1-208ENST00000613138 HYOU1Q9Y4L1 999 aa12.9□□□□□ -0.34
CSTF1-208ENST00000613138 SPEGQ15772 3267 aa12.9□□□□□ -0.34
CSTF1-208ENST00000613138 TBC1D3DA0A087WVF3 549 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 TBC1D3IA0A087WXS9 549 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 TBC1D3EA0A087X179 549 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 TBC1D3KA0A087X1G2 549 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 TTC24A2A3L6 582 aaPredicted RBP12.89□□□□□ -0.35
CSTF1-208ENST00000613138 TBC1D3FA6NER0 549 aaPredicted RBP12.89□□□□□ -0.35
CSTF1-208ENST00000613138 TBC1D3LB9A6J9 549 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 DFFAO00273 331 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 BCAT2O15382 392 aaPredicted RBP12.89□□□□□ -0.35
CSTF1-208ENST00000613138 DAPK3O43293 454 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 MAP3K6O95382 1288 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 WNT1P04628 370 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 H2AFZP0C0S5 128 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 TBC1D3HP0C7X1 549 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 ITIH2P19823 946 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 RGRP47804 291 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 AIF1P55008 147 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 PIGHQ14442 188 aaPredicted RBP12.89□□□□□ -0.35
CSTF1-208ENST00000613138 PRAMEF14Q5SWL7 426 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 SYCP2LQ5T4T6 812 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 TBC1D3GQ6DHY5 549 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 TBC1D3CQ6IPX1 549 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 KDM7AQ6ZMT4 941 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 H2AFVQ71UI9 128 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 ERMP1Q7Z2K6 904 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 DGLUCYQ7Z3D6 616 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 TBC1D3Q8IZP1 549 aaPredicted RBP12.89□□□□□ -0.35
CSTF1-208ENST00000613138 UMODL1-AS1Q8N2C9 162 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 MINDY1Q8N5J2 469 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 NIPA2Q8N8Q9 360 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 FAM131CQ96AQ9 280 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 NSMCE3Q96MG7 304 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 MYOCQ99972 504 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 PDFQ9HBH1 243 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 TMEM9BQ9NQ34 198 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 ZNHIT6Q9NWK9 470 aaKnown RBP12.89□□□□□ -0.35
CSTF1-208ENST00000613138 HECAQ9UBI9 543 aaPredicted RBP12.89□□□□□ -0.35
CSTF1-208ENST00000613138 IL36AQ9UHA7 158 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 IP6K2Q9UHH9 426 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 ITM2BQ9Y287 266 aa12.89□□□□□ -0.35
CSTF1-208ENST00000613138 A0A1B0GTW7 788 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 C1QTNF3-AMACRE9PGA6 284 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 MYO1FO00160 1098 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 KRIT1O00522 736 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 ARHGAP33O14559 1287 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 ALOX15BO15296 676 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 FGF10O15520 208 aaPredicted RBP12.88□□□□□ -0.35
CSTF1-208ENST00000613138 PLRG1O43660 514 aaKnown RBP12.88□□□□□ -0.35
CSTF1-208ENST00000613138 TPM1P09493 284 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 DESP17661 470 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 IL4RP24394 825 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 ARSEP51690 589 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 CLCN6P51797 869 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 CDH6P55285 790 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 SFSWAPQ12872 951 aaKnown RBP12.88□□□□□ -0.35
CSTF1-208ENST00000613138 MESDQ14696 234 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 DPYSL2Q16555 572 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 AFMIDQ63HM1 303 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 PARS2Q7L3T8 475 aaKnown RBP12.88□□□□□ -0.35
CSTF1-208ENST00000613138 RABEPKQ7Z6M1 372 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 PCDH20Q8N6Y1 951 aaKnown RBP12.88□□□□□ -0.35
CSTF1-208ENST00000613138 OR2T34Q8NGX1 318 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 SLC35G2Q8TBE7 412 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 CTNNBL1Q8WYA6 563 aaPredicted RBP12.88□□□□□ -0.35
CSTF1-208ENST00000613138 TSC1Q92574 1164 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 CCDC42Q96M95 316 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 CSPG4P5Q96PW8 444 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 HEPHQ9BQS7 1158 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 RTKNQ9BST9 563 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 CEP44Q9C0F1 390 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 GOLPH3Q9H4A6 298 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 FZD3Q9NPG1 666 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 FZD4Q9ULV1 537 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 SCML1Q9UN30 329 aa12.88□□□□□ -0.35
CSTF1-208ENST00000613138 ARID1BQ8NFD5 2236 aaPredicted RBP12.87□□□□□ -0.35
CSTF1-208ENST00000613138 SOWAHDA6NJG2 315 aa12.87□□□□□ -0.35
CSTF1-208ENST00000613138 LRRC72A6NJI9 287 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms