RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 RBM15Q96T37 977 aaKnown RBP eCLIP17.83■□□□□ 0.448e-9■■□□□ 14.3
SREK1-216ENST00000612404 SLC25A51Q9H1U9 297 aa17.83■□□□□ 0.44
SREK1-216ENST00000612404 DEC1Q9P2X7 70 aa17.83■□□□□ 0.44
SREK1-216ENST00000612404 LIMD1Q9UGP4 676 aa17.83■□□□□ 0.44
SREK1-216ENST00000612404 FCF1Q9Y324 198 aaKnown RBP17.83■□□□□ 0.44
SREK1-216ENST00000612404 GOLGA6CA6NDK9 693 aa17.82■□□□□ 0.44
SREK1-216ENST00000612404 GOLGA6BA6NDN3 693 aa17.82■□□□□ 0.44
SREK1-216ENST00000612404 K7ERQ8 282 aa17.82■□□□□ 0.44
SREK1-216ENST00000612404 ANXA9O76027 345 aa17.82■□□□□ 0.44
SREK1-216ENST00000612404 MT-CYBP00156 380 aaPredicted RBP17.82■□□□□ 0.44
SREK1-216ENST00000612404 CISD3P0C7P0 127 aa17.82■□□□□ 0.44
SREK1-216ENST00000612404 GOLGA6DP0CG33 693 aa17.82■□□□□ 0.44
SREK1-216ENST00000612404 POLR2EP19388 210 aaKnown RBP17.82■□□□□ 0.44
SREK1-216ENST00000612404 TPSB2P20231 275 aa17.82■□□□□ 0.44
SREK1-216ENST00000612404 DSC2Q02487 901 aa17.82■□□□□ 0.44
SREK1-216ENST00000612404 MTM1Q13496 603 aa17.82■□□□□ 0.44
SREK1-216ENST00000612404 SPARCL1Q14515 664 aa17.82■□□□□ 0.44
SREK1-216ENST00000612404 TPSAB1Q15661 275 aa17.82■□□□□ 0.44
SREK1-216ENST00000612404 GEN1Q17RS7 908 aa17.82■□□□□ 0.44
SREK1-216ENST00000612404 AAK1Q2M2I8 961 aa17.82■□□□□ 0.44
SREK1-216ENST00000612404 GAB4Q2WGN9 574 aa17.82■□□□□ 0.44
SREK1-216ENST00000612404 ITPRIPL2Q3MIP1 535 aa17.82■□□□□ 0.44
SREK1-216ENST00000612404 INO80DQ53TQ3 878 aaPredicted RBP17.82■□□□□ 0.44
SREK1-216ENST00000612404 ADIPOR2Q86V24 386 aa17.82■□□□□ 0.44
SREK1-216ENST00000612404 EXOC2Q96KP1 924 aa17.82■□□□□ 0.44
SREK1-216ENST00000612404 PSKH2Q96QS6 385 aa17.82■□□□□ 0.44
SREK1-216ENST00000612404 MLPHQ9BV36 600 aaPredicted RBP17.82■□□□□ 0.44
SREK1-216ENST00000612404 GOLGA6AQ9NYA3 693 aa17.82■□□□□ 0.44
SREK1-216ENST00000612404 SLC25A13Q9UJS0 675 aa17.82■□□□□ 0.44
SREK1-216ENST00000612404 GJA4P35212 333 aa17.81■□□□□ 0.44
SREK1-216ENST00000612404 CD86P42081 329 aa17.81■□□□□ 0.44
SREK1-216ENST00000612404 STK19P49842 368 aaPredicted RBP17.81■□□□□ 0.44
SREK1-216ENST00000612404 SERPINH1P50454 418 aaKnown RBP17.81■□□□□ 0.44
SREK1-216ENST00000612404 ECT2LQ008S8 904 aa17.81■□□□□ 0.44
SREK1-216ENST00000612404 KDSRQ06136 332 aa17.81■□□□□ 0.44
SREK1-216ENST00000612404 DHX9Q08211 1270 aaKnown RBP17.81■□□□□ 0.44
SREK1-216ENST00000612404 HIF1AQ16665 826 aa17.81■□□□□ 0.44
SREK1-216ENST00000612404 BEND6Q5SZJ8 279 aaPredicted RBP17.81■□□□□ 0.44
SREK1-216ENST00000612404 MBLAC2Q68D91 279 aa17.81■□□□□ 0.44
SREK1-216ENST00000612404 GRAMD4Q6IC98 578 aa17.81■□□□□ 0.44
SREK1-216ENST00000612404 RNF135Q8IUD6 432 aa17.81■□□□□ 0.44
SREK1-216ENST00000612404 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.81■□□□□ 0.44
SREK1-216ENST00000612404 PPP1R2P1Q96PQ5 205 aa17.81■□□□□ 0.44
SREK1-216ENST00000612404 SEMA3CQ99985 751 aa17.81■□□□□ 0.44
SREK1-216ENST00000612404 CIPCQ9C0C6 399 aa17.81■□□□□ 0.44
SREK1-216ENST00000612404 EIF2B3Q9NR50 452 aaKnown RBP17.81■□□□□ 0.44
SREK1-216ENST00000612404 AAR2Q9Y312 384 aaKnown RBP17.81■□□□□ 0.44
SREK1-216ENST00000612404 COL6A3P12111 3177 aa17.81■□□□□ 0.44
SREK1-216ENST00000612404 SMAD6O43541 496 aaKnown RBP17.81■□□□□ 0.44
SREK1-216ENST00000612404 GJB3O75712 270 aa17.81■□□□□ 0.44
SREK1-216ENST00000612404 AP2A1O95782 977 aa17.81■□□□□ 0.44
SREK1-216ENST00000612404 ARL4CP56559 192 aa17.81■□□□□ 0.44
SREK1-216ENST00000612404 RHOAP61586 193 aa17.81■□□□□ 0.44
SREK1-216ENST00000612404 SARNPP82979 210 aaKnown RBP17.81■□□□□ 0.44
SREK1-216ENST00000612404 SULT2A1Q06520 285 aa17.81■□□□□ 0.44
SREK1-216ENST00000612404 NIPAL4Q0D2K0 466 aa17.81■□□□□ 0.44
SREK1-216ENST00000612404 SMAD2Q15796 467 aaKnown RBP17.81■□□□□ 0.44
SREK1-216ENST00000612404 LEXMQ3ZCV2 418 aa17.81■□□□□ 0.44
SREK1-216ENST00000612404 PTCRAQ6ISU1 281 aaPredicted RBP17.81■□□□□ 0.44
SREK1-216ENST00000612404 PPP1R21Q6ZMI0 780 aa17.81■□□□□ 0.44
SREK1-216ENST00000612404 CAVIN3Q969G5 261 aa17.81■□□□□ 0.44
SREK1-216ENST00000612404 IMP4Q96G21 291 aaKnown RBP17.81■□□□□ 0.44
SREK1-216ENST00000612404 MGME1Q9BQP7 344 aa17.81■□□□□ 0.44
SREK1-216ENST00000612404 TSPYL1Q9H0U9 437 aa17.81■□□□□ 0.44
SREK1-216ENST00000612404 PMPCBO75439 489 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 SCNN1BP51168 640 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 GEMP55040 296 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 CDK16Q00536 496 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 SLC20A2Q08357 652 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 MESP2Q0VG99 397 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 OLIG2Q13516 323 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 TMEM215Q68D42 235 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 NAIF1Q69YI7 327 aaPredicted RBP17.8■□□□□ 0.44
SREK1-216ENST00000612404 KIAA0907Q7Z7F0 614 aaPredicted RBP17.8■□□□□ 0.44
SREK1-216ENST00000612404 PLCD3Q8N3E9 789 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 IPMKQ8NFU5 416 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 CSGALNACT1Q8TDX6 532 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 FOXP3Q9BZS1 431 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 KCNK12Q9HB15 430 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 SLC27A6Q9Y2P4 619 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 ERI2A8K979 691 aaKnown RBP17.8■□□□□ 0.44
SREK1-216ENST00000612404 ARNTLO00327 626 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 USP12O75317 370 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 AVILO75366 819 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 GRIA1P42261 906 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 RGRP47804 291 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 PCSK7Q16549 785 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 FNBP1LQ5T0N5 605 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 CENPUQ71F23 418 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 KDELC2Q7Z4H8 507 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 TMC3Q7Z5M5 1100 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 PRPF39Q86UA1 669 aaKnown RBP17.8■□□□□ 0.44
SREK1-216ENST00000612404 PDIK1LQ8N165 341 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 MCUQ8NE86 351 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 ARRDC2Q8TBH0 407 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 WFIKKN2Q8TEU8 576 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 SORCS1Q8WY21 1168 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 SERPINB12Q96P63 405 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 LRRC40Q9H9A6 602 aa17.8■□□□□ 0.44
SREK1-216ENST00000612404 PIH1D1Q9NWS0 290 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms