RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 DRC7Q8IY82 874 aa18.12■□□□□ 0.49
SSBP1-215ENST00000612337 OR4C6Q8NH72 309 aa18.12■□□□□ 0.49
SSBP1-215ENST00000612337 SLC20A1Q8WUM9 679 aa18.12■□□□□ 0.49
SSBP1-215ENST00000612337 IFT43Q96FT9 208 aa18.12■□□□□ 0.49
SSBP1-215ENST00000612337 CALN1Q9BXU9 219 aa18.12■□□□□ 0.49
SSBP1-215ENST00000612337 RETREG1Q9H6L5 497 aa18.12■□□□□ 0.49
SSBP1-215ENST00000612337 TAB2Q9NYJ8 693 aa18.12■□□□□ 0.49
SSBP1-215ENST00000612337 OR12D3Q9UGF7 316 aa18.12■□□□□ 0.49
SSBP1-215ENST00000612337 FCF1Q9Y324 198 aaKnown RBP18.12■□□□□ 0.49
SSBP1-215ENST00000612337 HS3ST3A1Q9Y663 406 aa18.12■□□□□ 0.49
SSBP1-215ENST00000612337 A6NNZ2 444 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 AP1G1O43747 822 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 PIAS2O75928 621 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 GFPT2O94808 682 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 CD160O95971 181 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 ADRB3P13945 408 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 MMP8P22894 467 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 L1CAMP32004 1257 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 ETFBP38117 255 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 DNA2P51530 1060 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 CCNHP51946 323 aaPredicted RBP18.11■□□□□ 0.49
SSBP1-215ENST00000612337 CLDN2P57739 230 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 RPS21P63220 83 aaKnown RBP18.11■□□□□ 0.49
SSBP1-215ENST00000612337 E2F1Q01094 437 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 INSM1Q01101 510 aaPredicted RBP18.11■□□□□ 0.49
SSBP1-215ENST00000612337 FMO1Q01740 532 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 CDR2Q01850 454 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 ACAP1Q15027 740 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 MANEALQ5VSG8 457 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 DCP2Q8IU60 420 aaKnown RBP18.11■□□□□ 0.49
SSBP1-215ENST00000612337 PLPP6Q8IY26 295 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 SLC22A18ASQ8N1D0 253 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 ISG20Q96AZ6 181 aaKnown RBP18.11■□□□□ 0.49
SSBP1-215ENST00000612337 FEM1CQ96JP0 617 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 SLC17A9Q9BYT1 436 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 OSBPL2Q9H1P3 480 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 UCKL1Q9NWZ5 548 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 CLCA2Q9UQC9 943 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 FADS3Q9Y5Q0 445 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 AK5Q9Y6K8 562 aa18.11■□□□□ 0.49
SSBP1-215ENST00000612337 C2CD4BA6NLJ0 364 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 CHRNB2P17787 502 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 SDC4P31431 198 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 ADRA1BP35368 520 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 ACVRL1P37023 503 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 MAPKAPK2P49137 400 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 JAM2P57087 298 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 DAB2P98082 770 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 SEMG2Q02383 582 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 CDO1Q16878 200 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 C15orf59Q2T9L4 293 aaPredicted RBP18.1■□□□□ 0.49
SSBP1-215ENST00000612337 CCDC14Q49A88 953 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 RAB6CQ53S08 254 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 Q6ZSR6 202 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 PARS2Q7L3T8 475 aaKnown RBP18.1■□□□□ 0.49
SSBP1-215ENST00000612337 ZSCAN30Q86W11 494 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 NLRP14Q86W24 1093 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 DCBLD1Q8N8Z6 715 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 ENOX1Q8TC92 643 aaKnown RBP18.1■□□□□ 0.49
SSBP1-215ENST00000612337 RXFP2Q8WXD0 754 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 BMFQ96LC9 184 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 DCBLD2Q96PD2 775 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 RAB6CQ9H0N0 254 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 VPS16Q9H269 839 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 GPR27Q9NS67 375 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 NDFIP2Q9NV92 336 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 TMEM248Q9NWD8 314 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 DAAM1Q9Y4D1 1078 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 ACTL7AQ9Y615 435 aa18.1■□□□□ 0.49
SSBP1-215ENST00000612337 FFAR2O15552 330 aa18.09■□□□□ 0.49
SSBP1-215ENST00000612337 TLX3O43711 291 aaPredicted RBP18.09■□□□□ 0.49
SSBP1-215ENST00000612337 GIMD1P0DJR0 217 aa18.09■□□□□ 0.49
SSBP1-215ENST00000612337 ALPPL2P10696 532 aa18.09■□□□□ 0.49
SSBP1-215ENST00000612337 CKMT1AP12532 417 aa18.09■□□□□ 0.49
SSBP1-215ENST00000612337 RHOQP17081 205 aa18.09■□□□□ 0.49
SSBP1-215ENST00000612337 SOX5P35711 763 aa18.09■□□□□ 0.49
SSBP1-215ENST00000612337 EIF2S3P41091 472 aaKnown RBP18.09■□□□□ 0.49
SSBP1-215ENST00000612337 PTPN9P43378 593 aa18.09■□□□□ 0.49
SSBP1-215ENST00000612337 ABCG1P45844 678 aa18.09■□□□□ 0.49
SSBP1-215ENST00000612337 KLK7P49862 253 aa18.09■□□□□ 0.49
SSBP1-215ENST00000612337 GEMIN4P57678 1058 aaKnown RBP18.09■□□□□ 0.49
SSBP1-215ENST00000612337 POLR2FP61218 127 aaKnown RBP18.09■□□□□ 0.49
SSBP1-215ENST00000612337 FGL2Q14314 439 aa18.09■□□□□ 0.49
SSBP1-215ENST00000612337 KRT31Q15323 416 aa18.09■□□□□ 0.49
SSBP1-215ENST00000612337 CDKAL1Q5VV42 579 aa18.09■□□□□ 0.49
SSBP1-215ENST00000612337 RWDD4Q6NW29 188 aaKnown RBP18.09■□□□□ 0.49
SSBP1-215ENST00000612337 KYAT3Q6YP21 454 aaKnown RBP18.09■□□□□ 0.49
SSBP1-215ENST00000612337 TRIM72Q6ZMU5 477 aa18.09■□□□□ 0.49
SSBP1-215ENST00000612337 STRADAQ7RTN6 431 aa18.09■□□□□ 0.49
SSBP1-215ENST00000612337 PTAR1Q7Z6K3 402 aaPredicted RBP18.09■□□□□ 0.49
SSBP1-215ENST00000612337 PHLDB2Q86SQ0 1253 aa18.09■□□□□ 0.49
SSBP1-215ENST00000612337 CENPIQ92674 756 aaPredicted RBP18.09■□□□□ 0.49
SSBP1-215ENST00000612337 ARHGEF2Q92974 986 aaKnown RBP18.09■□□□□ 0.49
SSBP1-215ENST00000612337 C11orf70Q9BRQ4 267 aa18.09■□□□□ 0.49
SSBP1-215ENST00000612337 ZDHHC6Q9H6R6 413 aa18.09■□□□□ 0.49
SSBP1-215ENST00000612337 NLGN3Q9NZ94 848 aa18.09■□□□□ 0.49
SSBP1-215ENST00000612337 KALRNO60229 2985 aa18.08■□□□□ 0.49
SSBP1-215ENST00000612337 PTPRQQ9UMZ3 2332 aa18.08■□□□□ 0.48
SSBP1-215ENST00000612337 POM121BA6NF01 834 aa18.08■□□□□ 0.48
SSBP1-215ENST00000612337 FAM72CH0Y354 149 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms