RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 TRIML2Q8N7C3 387 aa15.33■□□□□ 0.05
PCDHGB1-202ENST00000611598 SLCO4A1Q96BD0 722 aa15.33■□□□□ 0.05
PCDHGB1-202ENST00000611598 ASB9Q96DX5 294 aa15.33■□□□□ 0.05
PCDHGB1-202ENST00000611598 SGF29Q96ES7 293 aa15.33■□□□□ 0.05
PCDHGB1-202ENST00000611598 VTI1BQ9UEU0 232 aa15.33■□□□□ 0.05
PCDHGB1-202ENST00000611598 CIDEBQ9UHD4 219 aa15.33■□□□□ 0.05
PCDHGB1-202ENST00000611598 MID2Q9UJV3 735 aa15.33■□□□□ 0.05
PCDHGB1-202ENST00000611598 PADI4Q9UM07 663 aa15.33■□□□□ 0.05
PCDHGB1-202ENST00000611598 APOA4P06727 396 aa15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 NFKB1P19838 968 aa15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 ADSLP30566 484 aaPredicted RBP15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 SCNN1AP37088 669 aa15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 RPL34P49207 117 aaKnown RBP15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 SLC26A2P50443 739 aa15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 NDST2P52849 883 aa15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 CDH15P55291 814 aa15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 DLK2Q6UY11 383 aa15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 HFE2Q6ZVN8 426 aa15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 PIGZQ86VD9 579 aa15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 CARM1Q86X55 608 aa15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 IFNLR1Q8IU57 520 aaPredicted RBP15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 CEP97Q8IW35 865 aa15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 MFSD6LQ8IWD5 586 aa15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 LINC01465Q8N7H1 131 aa15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 RIN3Q8TB24 985 aa15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 RDH11Q8TC12 318 aa15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 FAM110BQ8TC76 370 aa15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 NXNL1Q96CM4 212 aa15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 CIB1Q99828 191 aa15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 TRPV6Q9H1D0 765 aa15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 ERAP1Q9NZ08 941 aa15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 SNX13Q9Y5W8 968 aa15.33■□□□□ 0.04
PCDHGB1-202ENST00000611598 PGK1P00558 417 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 AHSGP02765 367 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 HNRNPLP14866 589 aaKnown RBP eCLIP15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 CLCN2P51788 898 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 RABGGTBP53611 331 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 TXNL4AP83876 142 aaKnown RBP15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 PDAP1Q13442 181 aaKnown RBP15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 TRIM25Q14258 630 aaKnown RBP15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 RPS27LQ71UM5 84 aaKnown RBP15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 UNC93AQ86WB7 457 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 HSPBAP1Q96EW2 488 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 TMEM79Q9BSE2 394 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 OLAHQ9NV23 265 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 GMPR2Q9P2T1 348 aaKnown RBP15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 CNOT11Q9UKZ1 510 aaKnown RBP15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 GMEB1Q9Y692 573 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 PRORSD1PA6NEY8 169 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 NEMP2A6NFY4 417 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 CLDN5O00501 218 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 SPTLC1O15269 473 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 BEST1O76090 585 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 H6PDO95479 791 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 C8BP07358 591 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 CCDC166P0CW27 439 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 GRM5P41594 1212 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 MPP1Q00013 466 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 POU5F1BQ06416 359 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 LPIN1Q14693 890 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 SH3D19Q5HYK7 790 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 HMBOX1Q6NT76 420 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 LPCAT2Q7L5N7 544 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 DENND6AQ8IWF6 608 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 ALDH16A1Q8IZ83 802 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 LPGAT1Q92604 370 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 TSNARE1Q96NA8 513 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 RHOJQ9H4E5 214 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 TNFRSF12AQ9NP84 129 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 GINS2Q9Y248 185 aa15.32■□□□□ 0.04
PCDHGB1-202ENST00000611598 SLCO1B7G3V0H7 640 aa15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 FBP2O00757 339 aa15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 GNL1P36915 607 aaPredicted RBP15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 ALDH3B2P48448 385 aa15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 HK2P52789 917 aa15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 CTBP1Q13363 440 aa15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 FRG1Q14331 258 aaKnown RBP15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 KYAT1Q16773 422 aa15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 ZNF280DQ6N043 979 aa15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 CNSTQ6PJW8 725 aa15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 MAMDC4Q6UXC1 1216 aa15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 NT5DC4Q86YG4 428 aa15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 HERC6Q8IVU3 1022 aa15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 TXNDC5Q8NBS9 432 aaKnown RBP15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 SNRNP27Q8WVK2 155 aaKnown RBP15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 IRGQQ8WZA9 623 aa15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 GPR78Q96P69 363 aa15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 NPY6RQ99463 290 aa15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 EIF2AQ9BY44 585 aaKnown RBP15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 OSBPL2Q9H1P3 480 aa15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 GBA3Q9H227 469 aa15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 TRPC7Q9HCX4 862 aa15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 GTSE1Q9NYZ3 720 aa15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 SUCOQ9UBS9 1254 aaKnown RBP15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 ANKRD6Q9Y2G4 727 aa15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 NUP205Q92621 2012 aa15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 WDR90Q96KV7 1748 aa15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 H3BNH8 94 aa15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 ZNF286BP0CG31 522 aa15.31■□□□□ 0.04
PCDHGB1-202ENST00000611598 CKMT2P17540 419 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms