RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 SLC44A5Q8NCS7 719 aa4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 CMASQ8NFW8 434 aaPredicted RBP4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 NFKBIDQ8NI38 313 aa4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 ZNF48Q96MX3 618 aaPredicted RBP4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 SLC25A18Q9H1K4 315 aa4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 SPAG4Q9NPE6 437 aa4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 THSD1Q9NS62 852 aa4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 TUBA8Q9NY65 449 aaPredicted RBP4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 PEMTQ9UBM1 199 aa4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 CNTNAP2Q9UHC6 1331 aa4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 CDH22Q9UJ99 828 aa4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 TRBV5-7A0A0A0MS05 114 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 A0A1W2PPH5 198 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 ARHGAP10A1A4S6 786 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 PABPN1LA6NDY0 278 aaKnown RBP4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 KIF1CO43896 1103 aaKnown RBP4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 MOSPD3O75425 235 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 TOP3BO95985 862 aaKnown RBP4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 CYP19A1P11511 503 aaPredicted RBP4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 COX7A2P14406 83 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 YWHAQP27348 245 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 CLCNKBP51801 687 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 UFM1P61960 85 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 GAD2Q05329 585 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 ME3Q16798 604 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 EDRF1Q3B7T1 1238 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 Q4G0T1 1027 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 SYTL3Q4VX76 610 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 ZNF667Q5HYK9 610 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 PIK3CD-AS1Q5SR53 167 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 HMBOX1Q6NT76 420 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 RRM2BQ7LG56 351 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 PRSS45Q7RTY3 260 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 KDELC2Q7Z4H8 507 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 R3HCC1LQ7Z5L2 792 aaKnown RBP4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 CHD1LQ86WJ1 897 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 DENND1AQ8TEH3 1009 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 PIGOQ8TEQ8 1089 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 UCMAQ8WVF2 138 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 CENPIQ92674 756 aaPredicted RBP4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 C7orf26Q96N11 449 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 FCRL4Q96PJ5 515 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 LBHD1Q9BQE6 289 aaPredicted RBP4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 WDR83Q9BRX9 315 aaKnown RBP4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 TMEM79Q9BSE2 394 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 PDCL3Q9H2J4 239 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 PNRC2Q9NPJ4 139 aaKnown RBP4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 OLA1Q9NTK5 396 aaKnown RBP4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 RNF146Q9NTX7 359 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 ZDHHC7Q9NXF8 308 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 KCND2Q9NZV8 630 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 AASSQ9UDR5 926 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 NAALADL1Q9UQQ1 740 aa4.58□□□□□ -1.68
SMCHD1-213ENST00000609587 ZMYM2Q9UBW7 1377 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 TEX13CA0A0J9YWL9 993 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 FAM157AC9JC47 383 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 RNMTO43148 476 aaKnown RBP4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 CNOT3O75175 753 aaKnown RBP4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 BMP15O95972 392 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 CBSLP0DN79 551 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 CCKBRP32239 447 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 CBSP35520 551 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 DPP6P42658 865 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 MMP13P45452 471 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 CCR9P51686 369 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 ARSFP54793 590 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 LMOD3Q0VAK6 560 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 PTP4A2Q12974 167 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 SIM2Q14190 667 aaPredicted RBP4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 ETFDHQ16134 617 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 TSTQ16762 297 aaKnown RBP4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 TBC1D9BQ66K14 1250 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 TMEM81Q6P7N7 255 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 TRIM74Q86UV6 250 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 TRIM73Q86UV7 250 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 PLD5Q8N7P1 536 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 GDPD5Q8WTR4 605 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 COQ8BQ96D53 544 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 BABAM1Q9NWV8 329 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 TAS2R10Q9NYW0 307 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 MSRB1Q9NZV6 116 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 SARDHQ9UL12 918 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 RAP2CQ9Y3L5 183 aa4.57□□□□□ -1.68
SMCHD1-213ENST00000609587 ITIH6Q6UXX5 1313 aa4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 A0A0G2JK05 382 aa4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 A0A1W2PPC1 479 aa4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 DDTLA6NHG4 134 aaPredicted RBP4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 PPEF2O14830 753 aa4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 TLX3O43711 291 aaPredicted RBP4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 EPHA8P29322 1005 aaPredicted RBP4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 MAN1A1P33908 653 aa4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 PTGER1P34995 402 aa4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 ARL1P40616 181 aaPredicted RBP4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 HARS2P49590 506 aaKnown RBP4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 BLKP51451 505 aa4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 MTX1Q13505 466 aa4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 PKP1Q13835 747 aa4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 SLC9B1Q4ZJI4 515 aa4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 C10orf25Q5T742 122 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms