RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 CEP63Q96MT8 703 aa17.72■□□□□ 0.43
CHMP4A-211ENST00000609024 TNKS2Q9H2K2 1166 aa17.72■□□□□ 0.43
CHMP4A-211ENST00000609024 CAAP1Q9H8G2 361 aa17.72■□□□□ 0.43
CHMP4A-211ENST00000609024 VPS51Q9UID3 782 aa17.72■□□□□ 0.43
CHMP4A-211ENST00000609024 HOOK1Q9UJC3 728 aaKnown RBP17.72■□□□□ 0.43
CHMP4A-211ENST00000609024 DOLKQ9UPQ8 538 aa17.72■□□□□ 0.43
CHMP4A-211ENST00000609024 SSUH2Q9Y2M2 353 aa17.72■□□□□ 0.43
CHMP4A-211ENST00000609024 OR51B4Q9Y5P0 310 aa17.72■□□□□ 0.43
CHMP4A-211ENST00000609024 PIEZO2Q9H5I5 2752 aa17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 CDRT15L2A8MXV6 281 aa17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 TMX2-CTNND1H3BSU7 103 aa17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 GRAP2O75791 330 aa17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 ANXA6P08133 673 aa17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 ITGA2BP08514 1039 aa17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 ADRB3P13945 408 aa17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 GGCXP38435 758 aa17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 CLN3Q13286 438 aa17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 ARL13BQ3SXY8 428 aa17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 COBLL1Q53SF7 1204 aa17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 RETSATQ6NUM9 610 aa17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 C22orf39Q6P5X5 142 aa17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 LINGO4Q6UY18 593 aa17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 ZNF606Q8WXB4 792 aa17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 SMARCE1Q969G3 411 aa17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 SLC13A1Q9BZW2 595 aa17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 TRIM4Q9C037 500 aa17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 STRADBQ9C0K7 418 aa17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 GOLPH3LQ9H4A5 285 aa17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 SYNCQ9H7C4 482 aa17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 UBE2TQ9NPD8 197 aaPredicted RBP17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 ASNSD1Q9NWL6 643 aa17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 APOBEC3BQ9UH17 382 aaKnown RBP17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 PAXBP1Q9Y5B6 917 aa17.71■□□□□ 0.43
CHMP4A-211ENST00000609024 M0QYT0 321 aa17.7■□□□□ 0.42
CHMP4A-211ENST00000609024 SFTPCP11686 197 aa17.7■□□□□ 0.42
CHMP4A-211ENST00000609024 USP8P40818 1118 aa17.7■□□□□ 0.42
CHMP4A-211ENST00000609024 IRAK1P51617 712 aa17.7■□□□□ 0.42
CHMP4A-211ENST00000609024 INHBCP55103 352 aa17.7■□□□□ 0.42
CHMP4A-211ENST00000609024 SKOR1P84550 965 aa17.7■□□□□ 0.42
CHMP4A-211ENST00000609024 EIF4EBP2Q13542 120 aaPredicted RBP17.7■□□□□ 0.42
CHMP4A-211ENST00000609024 ATG14Q6ZNE5 492 aa17.7■□□□□ 0.42
CHMP4A-211ENST00000609024 DPY19L3Q6ZPD9 716 aa17.7■□□□□ 0.42
CHMP4A-211ENST00000609024 CLEC14AQ86T13 490 aa17.7■□□□□ 0.42
CHMP4A-211ENST00000609024 SETD3Q86TU7 594 aaPredicted RBP17.7■□□□□ 0.42
CHMP4A-211ENST00000609024 RYBPQ8N488 228 aaPredicted RBP17.7■□□□□ 0.42
CHMP4A-211ENST00000609024 DCAF4L2Q8NA75 395 aa17.7■□□□□ 0.42
CHMP4A-211ENST00000609024 PPP1R13BQ96KQ4 1090 aa17.7■□□□□ 0.42
CHMP4A-211ENST00000609024 SLC2A13Q96QE2 648 aa17.7■□□□□ 0.42
CHMP4A-211ENST00000609024 CCDC3Q9BQI4 270 aa17.7■□□□□ 0.42
CHMP4A-211ENST00000609024 SPON2Q9BUD6 331 aa17.7■□□□□ 0.42
CHMP4A-211ENST00000609024 WDCPQ9H6R7 721 aa17.7■□□□□ 0.42
CHMP4A-211ENST00000609024 EPB41L5Q9HCM4 733 aa17.7■□□□□ 0.42
CHMP4A-211ENST00000609024 ATXN7L1Q9ULK2 861 aaPredicted RBP17.7■□□□□ 0.42
CHMP4A-211ENST00000609024 GOLGA6L4A6NEF3 574 aa17.69■□□□□ 0.42
CHMP4A-211ENST00000609024 SMAD6O43541 496 aaKnown RBP17.69■□□□□ 0.42
CHMP4A-211ENST00000609024 ITGB7P26010 798 aa17.69■□□□□ 0.42
CHMP4A-211ENST00000609024 OR1E1P30953 314 aa17.69■□□□□ 0.42
CHMP4A-211ENST00000609024 L1CAMP32004 1257 aa17.69■□□□□ 0.42
CHMP4A-211ENST00000609024 ADKP55263 362 aaKnown RBP17.69■□□□□ 0.42
CHMP4A-211ENST00000609024 EIF3IQ13347 325 aaKnown RBP17.69■□□□□ 0.42
CHMP4A-211ENST00000609024 PRRT3Q5FWE3 981 aa17.69■□□□□ 0.42
CHMP4A-211ENST00000609024 PERM1Q5SV97 790 aa17.69■□□□□ 0.42
CHMP4A-211ENST00000609024 FAXCQ5TGI0 409 aa17.69■□□□□ 0.42
CHMP4A-211ENST00000609024 C14orf80Q86SX3 495 aa17.69■□□□□ 0.42
CHMP4A-211ENST00000609024 FBXO39Q8N4B4 442 aa17.69■□□□□ 0.42
CHMP4A-211ENST00000609024 ZSCAN1Q8NBB4 408 aa17.69■□□□□ 0.42
CHMP4A-211ENST00000609024 LMO3Q8TAP4 145 aa17.69■□□□□ 0.42
CHMP4A-211ENST00000609024 SCG3Q8WXD2 468 aaKnown RBP17.69■□□□□ 0.42
CHMP4A-211ENST00000609024 PRR11Q96HE9 360 aaPredicted RBP17.69■□□□□ 0.42
CHMP4A-211ENST00000609024 PSMB7Q99436 277 aa17.69■□□□□ 0.42
CHMP4A-211ENST00000609024 HEPHQ9BQS7 1158 aa17.69■□□□□ 0.42
CHMP4A-211ENST00000609024 SEPT10Q9P0V9 454 aa17.69■□□□□ 0.42
CHMP4A-211ENST00000609024 PADI4Q9UM07 663 aa17.69■□□□□ 0.42
CHMP4A-211ENST00000609024 FADS3Q9Y5Q0 445 aa17.69■□□□□ 0.42
CHMP4A-211ENST00000609024 TRPM6Q9BX84 2022 aa17.69■□□□□ 0.42
CHMP4A-211ENST00000609024 SPTA1P02549 2419 aa17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 A0A1W2PNU3 283 aaPredicted RBP17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 PLD2O14939 933 aa17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 RAD51BO15315 384 aa17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 TSPAN6O43657 245 aa17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 CNTN5O94779 1100 aa17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 PPP1R2P41236 205 aa17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 DRAP1Q14919 205 aaPredicted RBP17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 C11orf57Q6ZUT1 292 aaPredicted RBP17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 ENOSF1Q7L5Y1 443 aa17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 TFAP2DQ7Z6R9 452 aa17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 PCDH20Q8N6Y1 951 aaKnown RBP17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 SGF29Q96ES7 293 aa17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 DHTKD1Q96HY7 919 aaPredicted RBP17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 KREMEN1Q96MU8 473 aa17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 LENG8Q96PV6 779 aaPredicted RBP17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 BOCQ9BWV1 1114 aa17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 CEP44Q9C0F1 390 aa17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 INTS2Q9H0H0 1204 aaKnown RBP17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 TKTL2Q9H0I9 626 aa17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 ZDHHC6Q9H6R6 413 aa17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 GPR27Q9NS67 375 aa17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 GULP1Q9UBP9 304 aa17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 CNTN6Q9UQ52 1028 aa17.68■□□□□ 0.42
CHMP4A-211ENST00000609024 A0A0D9SEW6 157 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms