RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 Q6ZSR6 202 aa13.65□□□□□ -0.22
POLR2J3-219ENST00000608621 ABI3BPQ7Z7G0 1075 aa13.65□□□□□ -0.22
POLR2J3-219ENST00000608621 DRC7Q8IY82 874 aa13.65□□□□□ -0.22
POLR2J3-219ENST00000608621 PCDH20Q8N6Y1 951 aaKnown RBP13.65□□□□□ -0.22
POLR2J3-219ENST00000608621 EMC1Q8N766 993 aa13.65□□□□□ -0.22
POLR2J3-219ENST00000608621 MSANTD4Q8NCY6 345 aa13.65□□□□□ -0.22
POLR2J3-219ENST00000608621 CEP44Q9C0F1 390 aa13.65□□□□□ -0.22
POLR2J3-219ENST00000608621 RAB6CQ9H0N0 254 aa13.65□□□□□ -0.22
POLR2J3-219ENST00000608621 CLSTN2Q9H4D0 955 aa13.65□□□□□ -0.22
POLR2J3-219ENST00000608621 FCF1Q9Y324 198 aaKnown RBP13.65□□□□□ -0.22
POLR2J3-219ENST00000608621 FADS3Q9Y5Q0 445 aa13.65□□□□□ -0.22
POLR2J3-219ENST00000608621 SHROOM3Q8TF72 1996 aa13.65□□□□□ -0.22
POLR2J3-219ENST00000608621 POM121BA6NF01 834 aa13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 EIF4E1BA6NMX2 242 aaKnown RBP13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 A6NNZ2 444 aa13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 RRP8O43159 456 aaKnown RBP13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 LSM8O95777 96 aaKnown RBP13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 CD160O95971 181 aa13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 MYF5P13349 255 aa13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 ADRB3P13945 408 aa13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 ITGB7P26010 798 aa13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 ACVRL1P37023 503 aa13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 CCNHP51946 323 aaPredicted RBP13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 RPS21P63220 83 aaKnown RBP13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 NOMO3P69849 1222 aa13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 FGL2Q14314 439 aa13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 NAA35Q5VZE5 725 aa13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 ARCQ7LC44 396 aa13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 PHLDB2Q86SQ0 1253 aa13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 DCP2Q8IU60 420 aaKnown RBP13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 SLC22A18ASQ8N1D0 253 aa13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 DCBLD1Q8N8Z6 715 aa13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 FAM174AQ8TBP5 190 aa13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 FGF11Q92914 225 aa13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 IFT43Q96FT9 208 aa13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 APOLD1Q96LR9 279 aa13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 MAGEB5Q9BZ81 275 aa13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 METTL5Q9NRN9 209 aaKnown RBP13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 NDFIP2Q9NV92 336 aa13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 DNAJC28Q9NX36 388 aa13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 HECAQ9UBI9 543 aaPredicted RBP13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 PPARGC1AQ9UBK2 798 aaKnown RBP13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 RAI2Q9Y5P3 530 aa13.64□□□□□ -0.23
POLR2J3-219ENST00000608621 NEMP2A6NFY4 417 aa13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 RAD51BO15315 384 aa13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 OPA1O60313 960 aa13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 BRINP1O60477 761 aa13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 ALPPL2P10696 532 aa13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 CKMT1AP12532 417 aa13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 GKP32189 559 aa13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 ADRA1BP35368 520 aa13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 HNRNPKP61978 463 aaKnown RBP eCLIP13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 CDO1Q16878 200 aa13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 C15orf59Q2T9L4 293 aaPredicted RBP13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 TCP11X2Q5H9J9 407 aa13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 KIAA1161Q6NSJ0 714 aa13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 PTAR1Q7Z6K3 402 aaPredicted RBP13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 RYBPQ8N488 228 aaPredicted RBP13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 EPS8L1Q8TE68 723 aa13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 SLC20A1Q8WUM9 679 aa13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 RXFP2Q8WXD0 754 aa13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 BAP1Q92560 729 aa13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 TM6SF2Q9BZW4 377 aa13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 OSBPL2Q9H1P3 480 aa13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 PRORYQ9H606 182 aa13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 ZDHHC6Q9H6R6 413 aa13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 NLGN3Q9NZ94 848 aa13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 OR12D3Q9UGF7 316 aa13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 DACH1Q9UI36 760 aa13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 DNAI1Q9UI46 699 aa13.63□□□□□ -0.23
POLR2J3-219ENST00000608621 IGLON5A6NGN9 336 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 C16orf96A6NNT2 1141 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 F8VZ95 297 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 FAM72CH0Y354 149 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 SCAMP1O15126 338 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 AP1G1O43747 822 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 NEBLO76041 1014 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 GFPT2O94808 682 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 CYP1A1P04798 512 aaPredicted RBP13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 CHRNB2P17787 502 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 ACTN2P35609 894 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 SGCGQ13326 291 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 FZD2Q14332 565 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 ARL13BQ3SXY8 428 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 CCDC14Q49A88 953 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 FAM72AQ5TYM5 149 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 FAM72DQ6L9T8 149 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 RWDD4Q6NW29 188 aaKnown RBP13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 PARS2Q7L3T8 475 aaKnown RBP13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 FAM72BQ86X60 149 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 ZNF677Q86XU0 584 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 PLPP6Q8IY26 295 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 JOSD2Q8TAC2 188 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 SLC30A5Q8TAD4 765 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 SNIP1Q8TAD8 396 aaKnown RBP13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 ARHGEF2Q92974 986 aaKnown RBP13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 ISG20Q96AZ6 181 aaKnown RBP13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 C1QTNF2Q9BXJ5 285 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 VPS16Q9H269 839 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 TAB2Q9NYJ8 693 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms