RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 LIG3P49916 1009 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 GTF2A1P52655 376 aaPredicted RBP5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 NDST2P52849 883 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 ADGRE1Q14246 886 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 LBRQ14739 615 aaKnown RBP5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 MS4A13Q5J8X5 152 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 TMEM164Q5U3C3 297 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 GKAP1Q5VSY0 366 aaPredicted RBP5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 FBXL22Q6P050 247 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 SYCE2Q6PIF2 218 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 LINGO4Q6UY18 593 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 SPOCD1Q6ZMY3 1216 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 IRF2BP1Q8IU81 584 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 TRAPPC5Q8IUR0 188 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 CACNA2D3Q8IZS8 1091 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 DEFB119Q8N690 84 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 ALLCQ8N6M5 410 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 RTL3Q8N8U3 475 aaKnown RBP5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 PIP4K2CQ8TBX8 421 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 EXOC2Q96KP1 924 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 CENPKQ9BS16 269 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 IER2Q9BTL4 223 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 STRA6Q9BX79 667 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 TNKS2Q9H2K2 1166 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 LINC00597Q9H2U6 94 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 SMARCAL1Q9NZC9 954 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 RCOR3Q9P2K3 495 aaPredicted RBP5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 RAB21Q9UL25 225 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 PLAAQ9Y263 795 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 A0A0A6YYK5 440 aaPredicted RBP5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 KRT14P02533 472 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 RPN2P04844 631 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 KRT15P19012 456 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 PBLDP30039 288 aaPredicted RBP5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 CHRNA3P32297 505 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 HADHAP40939 763 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 TNK2Q07912 1038 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 PITRM1Q5JRX3 1037 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 MIIPQ5JXC2 388 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 RASIP1Q5U651 963 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 ASTLQ6HA08 431 aaPredicted RBP5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 TRAF7Q6Q0C0 670 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 MARK2Q7KZI7 788 aaKnown RBP5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 TMEM25Q86YD3 366 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 SPEM1Q8N4L4 309 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 BEND7Q8N7W2 519 aaPredicted RBP5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 DCAF4L2Q8NA75 395 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 OR6K2Q8NGY2 324 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 CFAP61Q8NHU2 1237 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 FNIP1Q8TF40 1166 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 CFAP36Q96G28 342 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 SERAC1Q96JX3 654 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 EGFL8Q99944 293 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 CLPBQ9H078 707 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 RYDENQ9NUL5 291 aaKnown RBP5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 PSD3Q9NYI0 1048 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 ZNHIT2Q9UHR6 403 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 TTC7AQ9ULT0 858 aaPredicted RBP5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 RAD54BQ9Y620 910 aa5.24□□□□□ -1.57
SCARNA15-201ENST00000607520 ZNFX1Q9P2E3 1918 aaKnown RBP5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 KCNK1O00180 336 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 SOX1O00570 391 aaPredicted RBP5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 LRIG2O94898 1065 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 F11P03951 625 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 EDN1P05305 212 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 SRPRAP08240 638 aaKnown RBP5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 HLA-EP13747 358 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 ALDH3A1P30838 453 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 HOXD13P35453 343 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 TNFRSF4P43489 277 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 SOX9P48436 509 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 PXNP49023 591 aaPredicted RBP5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 ARSEP51690 589 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 ZNF132P52740 706 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 EIF3BP55884 814 aaKnown RBP5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 SF3A3Q12874 501 aaKnown RBP eCLIP5.23□□□□□ -1.572e-12■□□□□ 9.4
SCARNA15-201ENST00000607520 ELAVL3Q14576 367 aaKnown RBP5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 RFTN1Q14699 578 aaPredicted RBP5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 UGP2Q16851 508 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 TAF1BQ53T94 588 aaPredicted RBP5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 NLRP9Q7RTR0 991 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 ZNF366Q8N895 744 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 GSTCDQ8NEC7 633 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 OR2T3Q8NH03 318 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 PLEKHO2Q8TD55 490 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 BCL7CQ8WUZ0 217 aaPredicted RBP5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 TEKT4Q8WW24 435 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 C1orf54Q8WWF1 131 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 NTAN1Q96AB6 310 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 KLHL32Q96NJ5 620 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 ZNF670Q9BS34 389 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 FICDQ9BVA6 458 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 RETREG1Q9H6L5 497 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 CACYBPQ9HB71 228 aaKnown RBP5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 LTB4R2Q9NPC1 389 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 IL36AQ9UHA7 158 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 NOVA2Q9UNW9 492 aaKnown RBP5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 TRIP12Q14669 1992 aaPredicted RBP5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 RHPN2P1A8MT19 583 aa5.23□□□□□ -1.57
SCARNA15-201ENST00000607520 RNF225M0QZC1 329 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms