RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 TM4SF1P30408 202 aa5.89□□□□□ -1.47
LINC00458-206ENST00000607494 ABCD1P33897 745 aa5.89□□□□□ -1.47
LINC00458-206ENST00000607494 MVDP53602 400 aa5.89□□□□□ -1.47
LINC00458-206ENST00000607494 SLC30A6Q6NXT4 461 aa5.89□□□□□ -1.47
LINC00458-206ENST00000607494 VSTM1Q6UX27 236 aa5.89□□□□□ -1.47
LINC00458-206ENST00000607494 IKBIPQ70UQ0 350 aa5.89□□□□□ -1.47
LINC00458-206ENST00000607494 SZRD1Q7Z422 152 aa5.89□□□□□ -1.47
LINC00458-206ENST00000607494 CNTROBQ8N137 903 aa5.89□□□□□ -1.47
LINC00458-206ENST00000607494 PNPLA1Q8N8W4 532 aa5.89□□□□□ -1.47
LINC00458-206ENST00000607494 ATP2A3Q93084 1043 aa5.89□□□□□ -1.47
LINC00458-206ENST00000607494 SAAL1Q96ER3 474 aa5.89□□□□□ -1.47
LINC00458-206ENST00000607494 CALML4Q96GE6 196 aa5.89□□□□□ -1.47
LINC00458-206ENST00000607494 PRR11Q96HE9 360 aaPredicted RBP5.89□□□□□ -1.47
LINC00458-206ENST00000607494 VCPIP1Q96JH7 1222 aa5.89□□□□□ -1.47
LINC00458-206ENST00000607494 FEM1CQ96JP0 617 aa5.89□□□□□ -1.47
LINC00458-206ENST00000607494 ZMAT2Q96NC0 199 aaKnown RBP5.89□□□□□ -1.47
LINC00458-206ENST00000607494 EYA3Q99504 573 aa5.89□□□□□ -1.47
LINC00458-206ENST00000607494 TXLNGYQ9BZA5 131 aa5.89□□□□□ -1.47
LINC00458-206ENST00000607494 CTDSP1Q9GZU7 261 aa5.89□□□□□ -1.47
LINC00458-206ENST00000607494 CDCP1Q9H5V8 836 aa5.89□□□□□ -1.47
LINC00458-206ENST00000607494 USP29Q9HBJ7 922 aa5.89□□□□□ -1.47
LINC00458-206ENST00000607494 CFDP1Q9UEE9 299 aaPredicted RBP5.89□□□□□ -1.47
LINC00458-206ENST00000607494 GIMAP2Q9UG22 337 aa5.89□□□□□ -1.47
LINC00458-206ENST00000607494 PABPN1LA6NDY0 278 aaKnown RBP5.88□□□□□ -1.47
LINC00458-206ENST00000607494 CLIC1O00299 241 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 TGFB1I1O43294 461 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 URODP06132 367 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 ADRB2P07550 413 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 TMIGD3P0DMS9 266 aaPredicted RBP5.88□□□□□ -1.47
LINC00458-206ENST00000607494 LYL1P12980 280 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 COX7A2P14406 83 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 IGFBP2P18065 325 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 MATN1P21941 496 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 SCP2P22307 547 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 NFKBIAP25963 317 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 HADHAP40939 763 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 UFM1P61960 85 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 RPL7AP62424 266 aaKnown RBP5.88□□□□□ -1.47
LINC00458-206ENST00000607494 IFI35P80217 286 aaPredicted RBP5.88□□□□□ -1.47
LINC00458-206ENST00000607494 TXNL4AP83876 142 aaKnown RBP5.88□□□□□ -1.47
LINC00458-206ENST00000607494 ROR1Q01973 937 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 CALD1Q05682 793 aaKnown RBP5.88□□□□□ -1.47
LINC00458-206ENST00000607494 EPS8Q12929 822 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 MFSD13AQ14CX5 517 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 PIP4P1Q86T03 277 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 MON1AQ86VX9 555 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 SRBD1Q8N5C6 995 aaKnown RBP5.88□□□□□ -1.47
LINC00458-206ENST00000607494 LINC01465Q8N7H1 131 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 CCDC191Q8NCU4 936 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.88□□□□□ -1.47
LINC00458-206ENST00000607494 BAG1Q99933 345 aaPredicted RBP5.88□□□□□ -1.47
LINC00458-206ENST00000607494 CLSTN3Q9BQT9 956 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.88□□□□□ -1.47
LINC00458-206ENST00000607494 MXD3Q9BW11 206 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 CINPQ9BW66 212 aaPredicted RBP5.88□□□□□ -1.47
LINC00458-206ENST00000607494 RSPH9Q9H1X1 276 aaPredicted RBP5.88□□□□□ -1.47
LINC00458-206ENST00000607494 ALDH8A1Q9H2A2 487 aaPredicted RBP5.88□□□□□ -1.47
LINC00458-206ENST00000607494 ERVK-5Q9HDB9 667 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 ZCCHC17Q9NP64 241 aaKnown RBP5.88□□□□□ -1.47
LINC00458-206ENST00000607494 PCDHB16Q9NRJ7 776 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 SLC22A11Q9NSA0 550 aa5.88□□□□□ -1.47
LINC00458-206ENST00000607494 IGKV2D-30A0A075B6S6 120 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 NPIPB13A6NJU9 1138 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 NPIPB5A8MRT5 1133 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 NPIPB4C9JG80 1138 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 GJB3O75712 270 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 VDRP11473 427 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 ARSAP15289 507 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 ATF7P17544 494 aaPredicted RBP5.87□□□□□ -1.47
LINC00458-206ENST00000607494 IL11P20809 199 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 AVPR2P30518 371 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 ACSL1P33121 698 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 HNF1BP35680 557 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 PSMB10P40306 273 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 YPEL5P62699 121 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 ARHGAP8P85298 464 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 CFHR3Q02985 330 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 SLC14A1Q13336 389 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 ALKBH1Q13686 389 aaKnown RBP5.87□□□□□ -1.47
LINC00458-206ENST00000607494 PSMD6Q15008 389 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 UBAP2Q5T6F2 1119 aaKnown RBP5.87□□□□□ -1.47
LINC00458-206ENST00000607494 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.87□□□□□ -1.47
LINC00458-206ENST00000607494 TMEM88Q6PEY1 159 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 SCFD2Q8WU76 684 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 NSMCE1Q8WV22 266 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 IGFBPL1Q8WX77 278 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 KCNJ9Q92806 393 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 RADILQ96JH8 1075 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 YME1L1Q96TA2 773 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 PIP5K1AQ99755 562 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 LBHD1Q9BQE6 289 aaPredicted RBP5.87□□□□□ -1.47
LINC00458-206ENST00000607494 ELOVL1Q9BW60 279 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 ADGRE3Q9BY15 652 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 MPP6Q9NZW5 540 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 KLQ9UEF7 1012 aa5.87□□□□□ -1.47
LINC00458-206ENST00000607494 CORO1CQ9ULV4 474 aaPredicted RBP5.87□□□□□ -1.47
LINC00458-206ENST00000607494 MAGED1Q9Y5V3 778 aaPredicted RBP5.87□□□□□ -1.47
LINC00458-206ENST00000607494 A0A1W2PQM1 296 aa5.86□□□□□ -1.47
LINC00458-206ENST00000607494 SYN3O14994 580 aa5.86□□□□□ -1.47
LINC00458-206ENST00000607494 FYB1O15117 783 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms