RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 NDFIP2Q9NV92 336 aa19.57■□□□□ 0.72
CTSA-217ENST00000607482 PCSK1NQ9UHG2 260 aa19.57■□□□□ 0.72
CTSA-217ENST00000607482 PCOLCE2Q9UKZ9 415 aa19.57■□□□□ 0.72
CTSA-217ENST00000607482 A0A1W2PQU0 124 aa19.56■□□□□ 0.72
CTSA-217ENST00000607482 TCRBV5S1A1TA0A578 114 aa19.56■□□□□ 0.72
CTSA-217ENST00000607482 PRAMEF26H0Y7S4 382 aa19.56■□□□□ 0.72
CTSA-217ENST00000607482 SLC31A1O15431 190 aa19.56■□□□□ 0.72
CTSA-217ENST00000607482 LATO43561 262 aa19.56■□□□□ 0.72
CTSA-217ENST00000607482 KDELR3O43731 214 aa19.56■□□□□ 0.72
CTSA-217ENST00000607482 ITGAVP06756 1048 aa19.56■□□□□ 0.72
CTSA-217ENST00000607482 SPINK2P20155 84 aa19.56■□□□□ 0.72
CTSA-217ENST00000607482 PRKCIP41743 596 aa19.56■□□□□ 0.72
CTSA-217ENST00000607482 NEK3P51956 506 aa19.56■□□□□ 0.72
CTSA-217ENST00000607482 FAM193AP78312 1265 aa19.56■□□□□ 0.72
CTSA-217ENST00000607482 CCDC157Q569K6 752 aa19.56■□□□□ 0.72
CTSA-217ENST00000607482 FIGNQ5HY92 759 aa19.56■□□□□ 0.72
CTSA-217ENST00000607482 PRAMEF14Q5SWL7 426 aa19.56■□□□□ 0.72
CTSA-217ENST00000607482 PLEKHA7Q6IQ23 1121 aa19.56■□□□□ 0.72
CTSA-217ENST00000607482 NEK5Q6P3R8 708 aa19.56■□□□□ 0.72
CTSA-217ENST00000607482 KLK6Q92876 244 aa19.56■□□□□ 0.72
CTSA-217ENST00000607482 ISG20Q96AZ6 181 aaKnown RBP19.56■□□□□ 0.72
CTSA-217ENST00000607482 ELF4Q99607 663 aaPredicted RBP19.56■□□□□ 0.72
CTSA-217ENST00000607482 NCAPGQ9BPX3 1015 aa19.56■□□□□ 0.72
CTSA-217ENST00000607482 ORAI3Q9BRQ5 295 aa19.56■□□□□ 0.72
CTSA-217ENST00000607482 SCNM1Q9BWG6 230 aa19.56■□□□□ 0.72
CTSA-217ENST00000607482 HDAC8Q9BY41 377 aa19.56■□□□□ 0.72
CTSA-217ENST00000607482 EBF2Q9HAK2 575 aa19.56■□□□□ 0.72
CTSA-217ENST00000607482 AP4E1Q9UPM8 1137 aa19.56■□□□□ 0.72
CTSA-217ENST00000607482 LUC7L2Q9Y383 392 aaKnown RBP19.56■□□□□ 0.72
CTSA-217ENST00000607482 CXorf51AA0A1B0GTR3 108 aa19.55■□□□□ 0.72
CTSA-217ENST00000607482 EEF2KO00418 725 aaKnown RBP19.55■□□□□ 0.72
CTSA-217ENST00000607482 YKT6O15498 198 aa19.55■□□□□ 0.72
CTSA-217ENST00000607482 HYAL3O43820 417 aaPredicted RBP19.55■□□□□ 0.72
CTSA-217ENST00000607482 ITGB7P26010 798 aa19.55■□□□□ 0.72
CTSA-217ENST00000607482 AKT2P31751 481 aa19.55■□□□□ 0.72
CTSA-217ENST00000607482 HTR7P34969 479 aa19.55■□□□□ 0.72
CTSA-217ENST00000607482 YBEYP58557 167 aaPredicted RBP19.55■□□□□ 0.72
CTSA-217ENST00000607482 MAPK8IP2Q13387 824 aaPredicted RBP19.55■□□□□ 0.72
CTSA-217ENST00000607482 PARP15Q460N3 678 aa19.55■□□□□ 0.72
CTSA-217ENST00000607482 PPP6R3Q5H9R7 873 aaPredicted RBP19.55■□□□□ 0.72
CTSA-217ENST00000607482 KCNT1Q5JUK3 1230 aa19.55■□□□□ 0.72
CTSA-217ENST00000607482 ERMARDQ5T6L9 678 aa19.55■□□□□ 0.72
CTSA-217ENST00000607482 PIP5KL1Q5T9C9 394 aa19.55■□□□□ 0.72
CTSA-217ENST00000607482 OXR1Q8N573 874 aa19.55■□□□□ 0.72
CTSA-217ENST00000607482 MFSD2AQ8NA29 543 aa19.55■□□□□ 0.72
CTSA-217ENST00000607482 OR6K2Q8NGY2 324 aa19.55■□□□□ 0.72
CTSA-217ENST00000607482 ARRDC3Q96B67 414 aa19.55■□□□□ 0.72
CTSA-217ENST00000607482 MYOCQ99972 504 aa19.55■□□□□ 0.72
CTSA-217ENST00000607482 SYT11Q9BT88 431 aa19.55■□□□□ 0.72
CTSA-217ENST00000607482 IFNKQ9P0W0 207 aa19.55■□□□□ 0.72
CTSA-217ENST00000607482 ACTL7AQ9Y615 435 aa19.55■□□□□ 0.72
CTSA-217ENST00000607482 A0A1W2PQJ5 194 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 TMEM191CA6NGB0 347 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 EIF3CLB5ME19 914 aaKnown RBP19.54■□□□□ 0.72
CTSA-217ENST00000607482 RASA4BC9J798 803 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 DDX3XO00571 662 aaKnown RBP eCLIP19.54■□□□□ 0.722e-7■■■■■ 33.6
CTSA-217ENST00000607482 RASA4O43374 803 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 PCDHGA12O60330 932 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 POP4O95707 220 aaKnown RBP19.54■□□□□ 0.72
CTSA-217ENST00000607482 SERPING1P05155 500 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 FTH1P19P0C7X4 201 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 PRLRP16471 622 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 RHOAP61586 193 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 OGDHQ02218 1023 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 OVGP1Q12889 678 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 SGCGQ13326 291 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 ST3GAL2Q16842 350 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 HORMAD1Q86X24 394 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 DNAAF5Q86Y56 855 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 PAF1Q8N7H5 531 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 OR2AP1Q8NGE2 309 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 CASKIN2Q8WXE0 1202 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 KLHDC7BQ96G42 594 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 LRIG1Q96JA1 1093 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 FEM1CQ96JP0 617 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 GDAP1L1Q96MZ0 367 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 EIF3CQ99613 913 aaKnown RBP19.54■□□□□ 0.72
CTSA-217ENST00000607482 OSBPL1AQ9BXW6 950 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 GPATCH2LQ9NWQ4 482 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 WASF2Q9Y6W5 498 aa19.54■□□□□ 0.72
CTSA-217ENST00000607482 NYNRINQ9P2P1 1898 aaKnown RBP19.54■□□□□ 0.72
CTSA-217ENST00000607482 A0A1B0GTQ1 180 aa19.53■□□□□ 0.72
CTSA-217ENST00000607482 WNT9AO14904 365 aa19.53■□□□□ 0.72
CTSA-217ENST00000607482 ZNF821O75541 412 aaPredicted RBP19.53■□□□□ 0.72
CTSA-217ENST00000607482 IGSF6O95976 241 aa19.53■□□□□ 0.72
CTSA-217ENST00000607482 GSRP00390 522 aa19.53■□□□□ 0.72
CTSA-217ENST00000607482 WNT1P04628 370 aa19.53■□□□□ 0.72
CTSA-217ENST00000607482 ADRB3P13945 408 aa19.53■□□□□ 0.72
CTSA-217ENST00000607482 XPAP23025 273 aaPredicted RBP19.53■□□□□ 0.72
CTSA-217ENST00000607482 RPS21P63220 83 aaKnown RBP19.53■□□□□ 0.72
CTSA-217ENST00000607482 ZBED6P86452 979 aa19.53■□□□□ 0.72
CTSA-217ENST00000607482 MYLK3Q32MK0 819 aa19.53■□□□□ 0.72
CTSA-217ENST00000607482 CFAP58Q5T655 872 aa19.53■□□□□ 0.72
CTSA-217ENST00000607482 IQCHQ86VS3 1027 aa19.53■□□□□ 0.72
CTSA-217ENST00000607482 PLPP6Q8IY26 295 aa19.53■□□□□ 0.72
CTSA-217ENST00000607482 CHCHD4Q8N4Q1 142 aa19.53■□□□□ 0.72
CTSA-217ENST00000607482 PNPLA1Q8N8W4 532 aa19.53■□□□□ 0.72
CTSA-217ENST00000607482 SYN2Q92777 582 aaPredicted RBP19.53■□□□□ 0.72
CTSA-217ENST00000607482 FAM131CQ96AQ9 280 aa19.53■□□□□ 0.72
CTSA-217ENST00000607482 HMCESQ96FZ2 354 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms