RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 TXLNGYQ9BZA5 131 aa16.78■□□□□ 0.28
PMF1-206ENST00000606952 VPS45Q9NRW7 570 aa16.78■□□□□ 0.28
PMF1-206ENST00000606952 DNAJC17Q9NVM6 304 aaKnown RBP16.78■□□□□ 0.28
PMF1-206ENST00000606952 ARGLU1Q9NWB6 273 aaPredicted RBP16.78■□□□□ 0.28
PMF1-206ENST00000606952 LHX3Q9UBR4 397 aa16.78■□□□□ 0.28
PMF1-206ENST00000606952 MTRF1LQ9UGC7 380 aaKnown RBP16.78■□□□□ 0.28
PMF1-206ENST00000606952 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.77■□□□□ 0.28
PMF1-206ENST00000606952 E7ESA3 106 aa16.77■□□□□ 0.28
PMF1-206ENST00000606952 EIF3HO15372 352 aaKnown RBP eCLIP16.77■□□□□ 0.28
PMF1-206ENST00000606952 ANXA9O76027 345 aa16.77■□□□□ 0.28
PMF1-206ENST00000606952 TMCC1O94876 653 aa16.77■□□□□ 0.28
PMF1-206ENST00000606952 AP2A1O95782 977 aa16.77■□□□□ 0.28
PMF1-206ENST00000606952 ASLP04424 464 aa16.77■□□□□ 0.28
PMF1-206ENST00000606952 MLNP12872 115 aa16.77■□□□□ 0.28
PMF1-206ENST00000606952 CES1P23141 567 aa16.77■□□□□ 0.28
PMF1-206ENST00000606952 GJA4P35212 333 aa16.77■□□□□ 0.28
PMF1-206ENST00000606952 OPRD1P41143 372 aa16.77■□□□□ 0.28
PMF1-206ENST00000606952 MAGEA3P43357 314 aa16.77■□□□□ 0.28
PMF1-206ENST00000606952 NSUN2Q08J23 767 aaKnown RBP eCLIP16.77■□□□□ 0.28
PMF1-206ENST00000606952 ZNF235Q14590 738 aa16.77■□□□□ 0.28
PMF1-206ENST00000606952 EIF4HQ15056 248 aaKnown RBP16.77■□□□□ 0.28
PMF1-206ENST00000606952 ITPRIPL2Q3MIP1 535 aa16.77■□□□□ 0.28
PMF1-206ENST00000606952 FBXO38Q6PIJ6 1188 aa16.77■□□□□ 0.28
PMF1-206ENST00000606952 PPP1R21Q6ZMI0 780 aa16.77■□□□□ 0.28
PMF1-206ENST00000606952 CEP128Q6ZU80 1094 aa16.77■□□□□ 0.28
PMF1-206ENST00000606952 DNASE1L2Q92874 299 aa16.77■□□□□ 0.28
PMF1-206ENST00000606952 ISG20Q96AZ6 181 aaKnown RBP16.77■□□□□ 0.28
PMF1-206ENST00000606952 OXNAD1Q96HP4 312 aaPredicted RBP16.77■□□□□ 0.28
PMF1-206ENST00000606952 MLPHQ9BV36 600 aaPredicted RBP16.77■□□□□ 0.28
PMF1-206ENST00000606952 CEP44Q9C0F1 390 aa16.77■□□□□ 0.28
PMF1-206ENST00000606952 POLR1EQ9GZS1 481 aaKnown RBP16.77■□□□□ 0.28
PMF1-206ENST00000606952 NT5MQ9NPB1 228 aa16.77■□□□□ 0.28
PMF1-206ENST00000606952 FAM50BQ9Y247 325 aa16.77■□□□□ 0.28
PMF1-206ENST00000606952 AAR2Q9Y312 384 aaKnown RBP16.77■□□□□ 0.28
PMF1-206ENST00000606952 C5orf42Q9H799 3197 aa16.77■□□□□ 0.27
PMF1-206ENST00000606952 XIRP2A4UGR9 3374 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 TCRBV7S3A2A0A539 114 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 GOLGA6CA6NDK9 693 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 GOLGA6BA6NDN3 693 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 MUSKO15146 869 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 MMP2P08253 660 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 GOLGA6DP0CG33 693 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 CSNK1DP48730 415 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 GEMP55040 296 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 NIPAL4Q0D2K0 466 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 MPP3Q13368 585 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 PRPSAP1Q14558 356 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 GEN1Q17RS7 908 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 BEND6Q5SZJ8 279 aaPredicted RBP16.76■□□□□ 0.27
PMF1-206ENST00000606952 FAXCQ5TGI0 409 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 TMEM215Q68D42 235 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 MBLAC2Q68D91 279 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 GRAMD4Q6IC98 578 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 KDELC1Q6UW63 502 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 ZNF534Q76KX8 674 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 SUGP1Q8IWZ8 645 aaKnown RBP16.76■□□□□ 0.27
PMF1-206ENST00000606952 PLPP6Q8IY26 295 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 GSPT2Q8IYD1 628 aaKnown RBP16.76■□□□□ 0.27
PMF1-206ENST00000606952 MREGQ8N565 214 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 KDM1BQ8NB78 822 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 MAFAQ8NHW3 353 aaPredicted RBP16.76■□□□□ 0.27
PMF1-206ENST00000606952 CINPQ9BW66 212 aaPredicted RBP16.76■□□□□ 0.27
PMF1-206ENST00000606952 GOLGA6AQ9NYA3 693 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 DEC1Q9P2X7 70 aa16.76■□□□□ 0.27
PMF1-206ENST00000606952 LOC730098B7Z3J9 87 aa16.75■□□□□ 0.27
PMF1-206ENST00000606952 TIMM44O43615 452 aa16.75■□□□□ 0.27
PMF1-206ENST00000606952 NEBLO76041 1014 aa16.75■□□□□ 0.27
PMF1-206ENST00000606952 APRTP07741 180 aa16.75■□□□□ 0.27
PMF1-206ENST00000606952 SRPRAP08240 638 aaKnown RBP16.75■□□□□ 0.27
PMF1-206ENST00000606952 FAM153BP0C7A2 387 aa16.75■□□□□ 0.27
PMF1-206ENST00000606952 ADRA1AP35348 466 aa16.75■□□□□ 0.27
PMF1-206ENST00000606952 SKOR1P84550 965 aa16.75■□□□□ 0.27
PMF1-206ENST00000606952 FAM153CQ494X1 144 aa16.75■□□□□ 0.27
PMF1-206ENST00000606952 PREPLQ4J6C6 727 aaPredicted RBP16.75■□□□□ 0.27
PMF1-206ENST00000606952 SPDYCQ5MJ68 293 aa16.75■□□□□ 0.27
PMF1-206ENST00000606952 PRPF39Q86UA1 669 aaKnown RBP16.75■□□□□ 0.27
PMF1-206ENST00000606952 SH2D3CQ8N5H7 860 aa16.75■□□□□ 0.27
PMF1-206ENST00000606952 TERB1Q8NA31 727 aa16.75■□□□□ 0.27
PMF1-206ENST00000606952 TSEN2Q8NCE0 465 aaKnown RBP16.75■□□□□ 0.27
PMF1-206ENST00000606952 MRGPRX3Q96LB0 322 aa16.75■□□□□ 0.27
PMF1-206ENST00000606952 NUDCD1Q96RS6 583 aa16.75■□□□□ 0.27
PMF1-206ENST00000606952 BRD9Q9H8M2 597 aa16.75■□□□□ 0.27
PMF1-206ENST00000606952 LRRC40Q9H9A6 602 aa16.75■□□□□ 0.27
PMF1-206ENST00000606952 KCNK12Q9HB15 430 aa16.75■□□□□ 0.27
PMF1-206ENST00000606952 XAB2Q9HCS7 855 aaKnown RBP16.75■□□□□ 0.27
PMF1-206ENST00000606952 GTSE1Q9NYZ3 720 aa16.75■□□□□ 0.27
PMF1-206ENST00000606952 FAM153AQ9UHL3 310 aa16.75■□□□□ 0.27
PMF1-206ENST00000606952 ACTL7AQ9Y615 435 aa16.75■□□□□ 0.27
PMF1-206ENST00000606952 ANKRD36A6QL64 1941 aa16.74■□□□□ 0.27
PMF1-206ENST00000606952 TRIM24O15164 1050 aa16.74■□□□□ 0.27
PMF1-206ENST00000606952 ATP9BO43861 1147 aa16.74■□□□□ 0.27
PMF1-206ENST00000606952 MT-CO1P00395 513 aa16.74■□□□□ 0.27
PMF1-206ENST00000606952 SRCP12931 536 aa16.74■□□□□ 0.27
PMF1-206ENST00000606952 POLR2EP19388 210 aaKnown RBP16.74■□□□□ 0.27
PMF1-206ENST00000606952 ARL4CP56559 192 aa16.74■□□□□ 0.27
PMF1-206ENST00000606952 ECT2LQ008S8 904 aa16.74■□□□□ 0.27
PMF1-206ENST00000606952 SLMAPQ14BN4 828 aa16.74■□□□□ 0.27
PMF1-206ENST00000606952 AAK1Q2M2I8 961 aa16.74■□□□□ 0.27
PMF1-206ENST00000606952 FAM182AQ5T1J6 154 aa16.74■□□□□ 0.27
PMF1-206ENST00000606952 ARMC3Q5W041 872 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms