RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 GUF1Q8N442 669 aaKnown RBP12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 ZSCAN1Q8NBB4 408 aa12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 HTR3CQ8WXA8 447 aa12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 INTS4Q96HW7 963 aaKnown RBP12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 PPP1R16AQ96I34 528 aa12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 LRRC61Q9BV99 259 aa12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 TRIM62Q9BVG3 475 aa12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 MUC3BQ9H195 1237 aa12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 GEMIN8Q9NWZ8 242 aaKnown RBP12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 COX16Q9P0S2 106 aa12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 SEPT10Q9P0V9 454 aa12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 SLC12A6Q9UHW9 1150 aa12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 COQ4Q9Y3A0 265 aa12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 PCDHB4Q9Y5E5 795 aa12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 CENPEQ02224 2701 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 LMO7DNF2Z398 122 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 AGRPO00253 132 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ATMINO43313 823 aaPredicted RBP12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 SNAP91O60641 907 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 RHOBTB3O94955 611 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 MYL1P05976 194 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ANXA6P08133 673 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 JMJD7P0C870 316 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ADRB3P13945 408 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 STILQ15468 1287 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 SKIDA1Q1XH10 827 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 EDRF1Q3B7T1 1238 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 C4orf17Q53FE4 359 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ARSIQ5FYB1 569 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ESRP1Q6NXG1 681 aaKnown RBP12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 LINGO4Q6UY18 593 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ZFAND4Q86XD8 727 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 PHACTR4Q8IZ21 702 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ZNF564Q8TBZ8 553 aaPredicted RBP12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 BTN2A2Q8WVV5 523 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CCDC47Q96A33 483 aaKnown RBP12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CCDC74AQ96AQ1 378 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 FEM1CQ96JP0 617 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 GFM1Q96RP9 751 aaKnown RBP12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 KLF6Q99612 283 aaPredicted RBP12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 FUCA2Q9BTY2 467 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 TNKS2Q9H2K2 1166 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 POPDC2Q9HBU9 364 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 GULP1Q9UBP9 304 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 IL36AQ9UHA7 158 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 VPS51Q9UID3 782 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 RABGEF1Q9UJ41 708 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 VANGL2Q9ULK5 521 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 MAN2B2Q9Y2E5 1009 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 LOXL2Q9Y4K0 774 aa12.02□□□□□ -0.49
PDLIM1P1-201ENST00000604187 PRAMEF33A0A0G2JMD5 474 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 TMX2-CTNND1H3BSU7 103 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 RNF225M0QZC1 329 aaPredicted RBP12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CETN3O15182 167 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 NVLO15381 856 aaKnown RBP12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 YY2O15391 372 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 SMAD6O43541 496 aaKnown RBP12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 PRAMEF10O60809 474 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CLDN11O75508 207 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 LEFTY1O75610 366 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ENDOD1O94919 500 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 RPLP0P05388 317 aaKnown RBP12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 PFKFB1P16118 471 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ITIH1P19827 911 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CCR1P32246 355 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 THOP1P52888 689 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 PFN3P60673 137 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 YWHAZP63104 245 aaKnown RBP12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 KRT83P78385 493 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 FOXK1P85037 733 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 SGCGQ13326 291 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 AUHQ13825 339 aaKnown RBP12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 IGFBP7Q16270 282 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 C22orf39Q6P5X5 142 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 DPY19L3Q6ZPD9 716 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 SDR16C5Q8N3Y7 309 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ARL10Q8N8L6 244 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 KYQ8NBH2 561 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 KAT5Q92993 513 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 PSMB7Q99436 277 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 C2orf49Q9BVC5 232 aaPredicted RBP12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 DDIT4Q9NX09 232 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 FOXJ2Q9P0K8 574 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 SIRPGQ9P1W8 387 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 DACH1Q9UI36 760 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 PNMA8BQ9ULN7 279 aaPredicted RBP12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 TBC1D30Q9Y2I9 924 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 PAXBP1Q9Y5B6 917 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 FADS3Q9Y5Q0 445 aa12.01□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CLEC18AA5D8T8 446 aa12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 IGLON5A6NGN9 336 aa12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CELA2BP08218 269 aaPredicted RBP12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 SLC2A3P11169 496 aa12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 TSHRP16473 764 aa12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ITGB7P26010 798 aa12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 GPD2P43304 727 aa12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 RECQLP46063 649 aaPredicted RBP12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 RPL34P49207 117 aaKnown RBP12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CCL7P80098 99 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms