RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 AP1S1P61966 158 aa9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 IFI35P80217 286 aaPredicted RBP9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 GBE1Q04446 702 aa9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 CSTF1Q05048 431 aaKnown RBP9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 KLF1Q13351 362 aaPredicted RBP9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ZNF235Q14590 738 aa9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 LBRQ14739 615 aaKnown RBP9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 CST6Q15828 149 aa9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ACCSLQ4AC99 568 aa9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 USP39Q53GS9 565 aaKnown RBP9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 CARD16Q5EG05 197 aa9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 MARC1Q5VT66 337 aa9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ANO7Q6IWH7 933 aa9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 KIAA1211LQ6NV74 962 aa9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 LINGO4Q6UY18 593 aa9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 SLC36A4Q6YBV0 504 aa9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 Q6ZVU0 165 aa9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 TMPRSS6Q8IU80 811 aa9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 TEX26Q8N6G2 289 aa9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 OR2A12Q8NGT7 310 aa9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 HCAR2Q8TDS4 363 aa9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 HMGB4Q8WW32 186 aa9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 SIPA1Q96FS4 1042 aa9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 HHIPQ96QV1 700 aa9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 NAP1L3Q99457 506 aaPredicted RBP9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 CINPQ9BW66 212 aaPredicted RBP9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 TLR10Q9BXR5 811 aa9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 CPEB1Q9BZB8 566 aaKnown RBP9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 MKRN2Q9H000 416 aaKnown RBP9.64□□□□□ -0.87
SQSTM1P1-201ENST00000603451 SPAG17Q6Q759 2223 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ANKRD36A6QL64 1941 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 CFAP69A5D8W1 941 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 J3KR12 359 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 SMAD6O43541 496 aaKnown RBP9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 SOCS5O75159 536 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ZNF821O75541 412 aaPredicted RBP9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 POP4O95707 220 aaKnown RBP9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 PEX11BO96011 259 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 MT-CO1P00395 513 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 PYGMP11217 842 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 HLA-EP13747 358 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 CA4P22748 312 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 NFKBIAP25963 317 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 P2RY2P41231 377 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 DPP6P42658 865 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 WASP42768 502 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 MMP13P45452 471 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 CCNHP51946 323 aaPredicted RBP9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 PRKD1Q15139 912 aaPredicted RBP9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 NOMO1Q15155 1222 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 SLC14A2Q15849 920 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 CCDC181Q5TID7 509 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 DCAF12L1Q5VU92 463 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 CCDC13Q8IYE1 715 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 GAB3Q8WWW8 586 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 TRIM44Q96DX7 344 aaPredicted RBP9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 PBKQ96KB5 322 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ZNF641Q96N77 438 aaPredicted RBP9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 PPP1R2P1Q96PQ5 205 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 QKIQ96PU8 341 aaKnown RBP eCLIP9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 FAM129BQ96TA1 746 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 MGME1Q9BQP7 344 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 HEPHQ9BQS7 1158 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 POLR1EQ9GZS1 481 aaKnown RBP9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 EPC1Q9H2F5 836 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 PABPC3Q9H361 631 aaKnown RBP9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 KDM4CQ9H3R0 1056 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ITM2CQ9NQX7 267 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 HOMER3Q9NSC5 361 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 C2orf42Q9NWW7 574 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 LHX3Q9UBR4 397 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 IL36AQ9UHA7 158 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 PPM1HQ9ULR3 514 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 TTC7AQ9ULT0 858 aaPredicted RBP9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 PYCARDQ9ULZ3 195 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 PACSIN2Q9UNF0 486 aaPredicted RBP9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 HEY1Q9Y5J3 304 aa9.63□□□□□ -0.87
SQSTM1P1-201ENST00000603451 K7ERQ8 282 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 KCNK3O14649 394 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 TUBB4AP04350 444 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 KRT10P13645 584 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 CCNB1P14635 433 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 PRLRP16471 622 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 TCP1P17987 556 aaKnown RBP9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ITGB7P26010 798 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 SERPINA4P29622 427 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 CHRNA3P32297 505 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 RPS14P62263 151 aaKnown RBP9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 TCF15Q12870 199 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 SLC10A2Q12908 348 aaPredicted RBP9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 SLC45A4Q5BKX6 768 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 KAZNQ674X7 775 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 HEATR6Q6AI08 1181 aaKnown RBP9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 BRAT1Q6PJG6 821 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 DPY19L3Q6ZPD9 716 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 CDKL3Q8IVW4 592 aaPredicted RBP9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 PGBD3Q8N328 593 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ZNF366Q8N895 744 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 CCNYQ8ND76 341 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms