RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 ZNF34Q8IZ26 560 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 LRMDAQ9H2I8 198 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 SEMA4BQ9NPR2 832 aaPredicted RBP9.71□□□□□ -0.86
CSMD1-217ENST00000602723 PCDHA11Q9Y5I1 949 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 DIP2AQ14689 1571 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 ZMPSTE24O75844 475 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 SGCGQ13326 291 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 SLC15A2Q16348 729 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 ZC3H7AQ8IWR0 971 aaKnown RBP9.71□□□□□ -0.86
CSMD1-217ENST00000602723 REXO5Q96IC2 774 aaKnown RBP9.71□□□□□ -0.86
CSMD1-217ENST00000602723 DSN1Q9H410 356 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 ANGPT4Q9Y264 503 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 ZMYM2Q9UBW7 1377 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 KRT36O76013 467 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 PTPN3P26045 913 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 GPR1P46091 355 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 GMFBP60983 142 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 RPTNQ6XPR3 784 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 CKAP2Q8WWK9 683 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 TBC1D10AQ9BXI6 508 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 GAKO14976 1311 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 DHRS12A0PJE2 317 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 TCF4P15884 667 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 NDST1P52848 882 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 SMIM11AP58511 58 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 USP46P62068 366 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 FOLH1Q04609 750 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 SPIDRQ14159 915 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 TATDN2Q93075 761 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 UBE2E3Q969T4 207 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 ACADMP11310 421 aa9.71□□□□□ -0.86
CSMD1-217ENST00000602723 HIRAP54198 1017 aaPredicted RBP9.71□□□□□ -0.86
CSMD1-217ENST00000602723 PCDH20Q8N6Y1 951 aaKnown RBP9.71□□□□□ -0.86
CSMD1-217ENST00000602723 MTFMTQ96DP5 389 aaKnown RBP9.71□□□□□ -0.86
CSMD1-217ENST00000602723 PTCD3Q96EY7 689 aaKnown RBP9.71□□□□□ -0.86
CSMD1-217ENST00000602723 ELL3Q9HB65 397 aaPredicted RBP9.71□□□□□ -0.86
CSMD1-217ENST00000602723 CCDC59Q9P031 241 aaKnown RBP9.71□□□□□ -0.86
CSMD1-217ENST00000602723 RBAK-RBAKDNI3L0D1 243 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 USP17L7P0C7H9 530 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 ANPEPP15144 967 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 ZNF268Q14587 947 aaPredicted RBP9.7□□□□□ -0.86
CSMD1-217ENST00000602723 SETMARQ53H47 684 aaPredicted RBP9.7□□□□□ -0.86
CSMD1-217ENST00000602723 ZNF606Q8WXB4 792 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 MNTQ99583 582 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 GNPTGQ9UJJ9 305 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 SNX6Q9UNH7 406 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 MYL9P24844 172 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 IRAK1BP1Q5VVH5 260 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 PRAMEF18Q5VWM3 479 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 ARCQ7LC44 396 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 ZNF540Q8NDQ6 660 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 LEF1Q9UJU2 399 aaPredicted RBP9.7□□□□□ -0.86
CSMD1-217ENST00000602723 SAMHD1Q9Y3Z3 626 aaKnown RBP9.7□□□□□ -0.86
CSMD1-217ENST00000602723 NWD1Q149M9 1564 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 PGM3O95394 542 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 LTA4HP09960 611 aaKnown RBP9.7□□□□□ -0.86
CSMD1-217ENST00000602723 GRIA4P48058 902 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 SLC25A3Q00325 362 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 NEPROQ6NW34 567 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 GMCL1P1Q8NEA9 526 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 ETNPPLQ8TBG4 499 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 SYT15Q9BQS2 421 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 FAM126AQ9BYI3 521 aaPredicted RBP9.7□□□□□ -0.86
CSMD1-217ENST00000602723 ADAM28Q9UKQ2 775 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 SLIT1O75093 1534 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 LOC110117498-PIK3R3F6TDL0 507 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 UBE2Q2LH0YL09 131 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 SHBGP04278 402 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 ARP10275 920 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 CYP2A6P11509 494 aaPredicted RBP9.7□□□□□ -0.86
CSMD1-217ENST00000602723 TRAP1Q12931 704 aaKnown RBP9.7□□□□□ -0.86
CSMD1-217ENST00000602723 ARMCX6Q7L4S7 300 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 BTBD9Q96Q07 612 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 STOML2Q9UJZ1 356 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 CCDC189A1A4V9 331 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 ALOX5P09917 674 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 MIPP30301 263 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 SERPINB11Q96P15 392 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 QRFPRQ96P65 431 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 MTF2Q9Y483 593 aaPredicted RBP9.7□□□□□ -0.86
CSMD1-217ENST00000602723 IRAK3Q9Y616 596 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 KPNA5O15131 536 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 EPORP19235 508 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 NT5DC1Q5TFE4 455 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 MBOAT7Q96N66 472 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 DNAJC18Q9H819 358 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 EURLQ9NYK6 297 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 FAM50BQ9Y247 325 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 A0A0B4J269 797 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 RGSL1A5PLK6 1076 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 ZBTB14O43829 449 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 FARP2O94887 1054 aaPredicted RBP9.7□□□□□ -0.86
CSMD1-217ENST00000602723 IGSF6O95976 241 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 ITGA2P17301 1181 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 PSMB4P28070 264 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 DENND5AQ6IQ26 1287 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 SLC41A1Q8IVJ1 513 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 IL25Q9H293 177 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 PXMP2Q9NR77 195 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 KLQ9UEF7 1012 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms