RNA–Protein interactions for RNA: ENST00000602251.5

LTBP4-231, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-231	ENST00000602251	HNRNPK	P61978	463 aa	Known RBP eCLIP	18.89	■□□□□ 0.61	3e-7	■■■■□ 23.8
LTBP4-231	ENST00000602251	ZNF177	Q13360	481 aa	Predicted RBP	18.89	■□□□□ 0.61
LTBP4-231	ENST00000602251	CDKN3	Q16667	212 aa		18.89	■□□□□ 0.61
LTBP4-231	ENST00000602251	ZNF284	Q2VY69	593 aa		18.89	■□□□□ 0.61
LTBP4-231	ENST00000602251	NEK5	Q6P3R8	708 aa		18.89	■□□□□ 0.61
LTBP4-231	ENST00000602251	GUSBP11	Q6P575	273 aa		18.89	■□□□□ 0.61
LTBP4-231	ENST00000602251	ZNF574	Q6ZN55	896 aa	Predicted RBP	18.89	■□□□□ 0.61
LTBP4-231	ENST00000602251	SLC47A2	Q86VL8	602 aa		18.89	■□□□□ 0.61
LTBP4-231	ENST00000602251	DQX1	Q8TE96	717 aa	Known RBP	18.89	■□□□□ 0.61
LTBP4-231	ENST00000602251	ARRDC3	Q96B67	414 aa		18.89	■□□□□ 0.61
LTBP4-231	ENST00000602251	HSD3B7	Q9H2F3	369 aa		18.89	■□□□□ 0.61
LTBP4-231	ENST00000602251	DNAJC28	Q9NX36	388 aa		18.89	■□□□□ 0.61
LTBP4-231	ENST00000602251	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	18.89	■□□□□ 0.61
LTBP4-231	ENST00000602251	NOTCH2	Q04721	2471 aa		18.89	■□□□□ 0.61
LTBP4-231	ENST00000602251	SPTAN1	Q13813	2472 aa	Known RBP	18.89	■□□□□ 0.61
LTBP4-231	ENST00000602251	USP9Y	O00507	2555 aa	Predicted RBP	18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	MYO9A	B2RTY4	2548 aa		18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	C1QTNF3-AMACR	E9PGA6	284 aa		18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	GOLGA6L19	H0YKK7	550 aa		18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	SART1	O43290	800 aa	Known RBP	18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	ATP9B	O43861	1147 aa		18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	HNRNPA2B1	P22626	353 aa	Known RBP	18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	AKT2	P31751	481 aa		18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	KLK7	P49862	253 aa		18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	VASP	P50552	380 aa	Predicted RBP	18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	SNX16	P57768	344 aa		18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	NNT	Q13423	1086 aa		18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	ACCSL	Q4AC99	568 aa		18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	PIP5KL1	Q5T9C9	394 aa		18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	RAP1GAP2	Q684P5	730 aa		18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	DPY19L2P1	Q6NXN4	242 aa		18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	ZCCHC8	Q6NZY4	707 aa	Known RBP	18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	GCNT7	Q6ZNI0	430 aa		18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	RBM44	Q6ZP01	1051 aa	Known RBP	18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	EFL1	Q7Z2Z2	1120 aa	Known RBP	18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	ABI3BP	Q7Z7G0	1075 aa		18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	PASD1	Q8IV76	773 aa		18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	TPCN2	Q8NHX9	752 aa		18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	WDR36	Q8NI36	951 aa	Known RBP	18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	STK32A	Q8WU08	396 aa		18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	SERPINB11	Q96P15	392 aa		18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	NAA15	Q9BXJ9	866 aa	Known RBP	18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	NLRC4	Q9NPP4	1024 aa		18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	PCDHGC3	Q9UN70	934 aa		18.88	■□□□□ 0.61
LTBP4-231	ENST00000602251	EME2	A4GXA9	379 aa	Predicted RBP	18.87	■□□□□ 0.61
LTBP4-231	ENST00000602251	ALOX15B	O15296	676 aa		18.87	■□□□□ 0.61
LTBP4-231	ENST00000602251	SERPINC1	P01008	464 aa		18.87	■□□□□ 0.61
LTBP4-231	ENST00000602251	TACR2	P21452	398 aa		18.87	■□□□□ 0.61
LTBP4-231	ENST00000602251	DLG2	Q15700	870 aa		18.87	■□□□□ 0.61
LTBP4-231	ENST00000602251		Q6ZSR6	202 aa		18.87	■□□□□ 0.61
LTBP4-231	ENST00000602251	HORMAD1	Q86X24	394 aa		18.87	■□□□□ 0.61
LTBP4-231	ENST00000602251	ZNF548	Q8NEK5	533 aa	Predicted RBP	18.87	■□□□□ 0.61
LTBP4-231	ENST00000602251	EXTL1	Q92935	676 aa		18.87	■□□□□ 0.61
LTBP4-231	ENST00000602251	FAM149B1	Q96BN6	582 aa		18.87	■□□□□ 0.61
LTBP4-231	ENST00000602251	ERGIC2	Q96RQ1	377 aa		18.87	■□□□□ 0.61
LTBP4-231	ENST00000602251	GAN	Q9H2C0	597 aa		18.87	■□□□□ 0.61
LTBP4-231	ENST00000602251	SYNC	Q9H7C4	482 aa		18.87	■□□□□ 0.61
LTBP4-231	ENST00000602251	NCKIPSD	Q9NZQ3	722 aa		18.87	■□□□□ 0.61
LTBP4-231	ENST00000602251	SIK3	Q9Y2K2	1263 aa		18.87	■□□□□ 0.61
LTBP4-231	ENST00000602251	RP1	P56715	2156 aa		18.86	■□□□□ 0.61
LTBP4-231	ENST00000602251		F8VZ95	297 aa		18.86	■□□□□ 0.61
LTBP4-231	ENST00000602251	TCEA3	O75764	348 aa		18.86	■□□□□ 0.61
LTBP4-231	ENST00000602251	CYP11B1	P15538	503 aa		18.86	■□□□□ 0.61
LTBP4-231	ENST00000602251	IQCB1	Q15051	598 aa		18.86	■□□□□ 0.61
LTBP4-231	ENST00000602251	CRTC1	Q6UUV9	634 aa		18.86	■□□□□ 0.61
LTBP4-231	ENST00000602251		Q6ZVU0	165 aa		18.86	■□□□□ 0.61
LTBP4-231	ENST00000602251	USP53	Q70EK8	1073 aa		18.86	■□□□□ 0.61
LTBP4-231	ENST00000602251	CHSY1	Q86X52	802 aa		18.86	■□□□□ 0.61
LTBP4-231	ENST00000602251	DCP2	Q8IU60	420 aa	Known RBP	18.86	■□□□□ 0.61
LTBP4-231	ENST00000602251	CCAR2	Q8N163	923 aa	Known RBP	18.86	■□□□□ 0.61
LTBP4-231	ENST00000602251	ARHGAP9	Q9BRR9	750 aa		18.86	■□□□□ 0.61
LTBP4-231	ENST00000602251	TRIM62	Q9BVG3	475 aa		18.86	■□□□□ 0.61
LTBP4-231	ENST00000602251	SLC4A5	Q9BY07	1137 aa		18.86	■□□□□ 0.61
LTBP4-231	ENST00000602251	CBX8	Q9HC52	389 aa		18.86	■□□□□ 0.61
LTBP4-231	ENST00000602251	ANKMY1	Q9P2S6	941 aa		18.86	■□□□□ 0.61
LTBP4-231	ENST00000602251	ZFR2	Q9UPR6	939 aa	Known RBP	18.86	■□□□□ 0.61
LTBP4-231	ENST00000602251	NAALADL1	Q9UQQ1	740 aa		18.86	■□□□□ 0.61
LTBP4-231	ENST00000602251	CSNK1G3	Q9Y6M4	447 aa		18.86	■□□□□ 0.61
LTBP4-231	ENST00000602251		E5RJQ4	531 aa		18.85	■□□□□ 0.61
LTBP4-231	ENST00000602251	GFPT2	O94808	682 aa		18.85	■□□□□ 0.61
LTBP4-231	ENST00000602251	GJB6	O95452	261 aa		18.85	■□□□□ 0.61
LTBP4-231	ENST00000602251	CSF2	P04141	144 aa		18.85	■□□□□ 0.61
LTBP4-231	ENST00000602251	ITGB2	P05107	769 aa		18.85	■□□□□ 0.61
LTBP4-231	ENST00000602251	ITGA2B	P08514	1039 aa		18.85	■□□□□ 0.61
LTBP4-231	ENST00000602251	STAT1	P42224	750 aa		18.85	■□□□□ 0.61
LTBP4-231	ENST00000602251	RPL34	P49207	117 aa	Known RBP	18.85	■□□□□ 0.61
LTBP4-231	ENST00000602251	PDCL	Q13371	301 aa		18.85	■□□□□ 0.61
LTBP4-231	ENST00000602251	FZD2	Q14332	565 aa		18.85	■□□□□ 0.61
LTBP4-231	ENST00000602251	OR6B2	Q6IFH4	312 aa		18.85	■□□□□ 0.61
LTBP4-231	ENST00000602251	CXorf57	Q6NSI4	855 aa	Known RBP	18.85	■□□□□ 0.61
LTBP4-231	ENST00000602251	LUZP1	Q86V48	1076 aa		18.85	■□□□□ 0.61
LTBP4-231	ENST00000602251	CIR1	Q86X95	450 aa	Predicted RBP	18.85	■□□□□ 0.61
LTBP4-231	ENST00000602251	TMEM35B	Q8NCS4	154 aa		18.85	■□□□□ 0.61
LTBP4-231	ENST00000602251	FAM174A	Q8TBP5	190 aa		18.85	■□□□□ 0.61
LTBP4-231	ENST00000602251	SGF29	Q96ES7	293 aa		18.85	■□□□□ 0.61
LTBP4-231	ENST00000602251	ALG14	Q96F25	216 aa		18.85	■□□□□ 0.61
LTBP4-231	ENST00000602251	PPP1R13B	Q96KQ4	1090 aa		18.85	■□□□□ 0.61
LTBP4-231	ENST00000602251	BMF	Q96LC9	184 aa		18.85	■□□□□ 0.61
LTBP4-231	ENST00000602251	GPR27	Q9NS67	375 aa		18.85	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms