RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 ARF5P84085 180 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 CTC1Q2NKJ3 1217 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 INO80DQ53TQ3 878 aaPredicted RBP18.28■□□□□ 0.52
VRK3-225ENST00000601912 C3orf62Q6ZUJ4 267 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 PGBD5Q8N414 524 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 IPMKQ8NFU5 416 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 LRRC3BQ96PB8 259 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 TBL1YQ9BQ87 522 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 S1PR5Q9H228 398 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 TTYH1Q9H313 450 aaPredicted RBP18.28■□□□□ 0.52
VRK3-225ENST00000601912 ZFP14Q9HCL3 533 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 CASS4Q9NQ75 786 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 BFARQ9NZS9 450 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 VPS51Q9UID3 782 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 CLEC4EQ9ULY5 219 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 MAD1L1Q9Y6D9 718 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 HEPACAM2A8MVW5 462 aa18.27■□□□□ 0.52
VRK3-225ENST00000601912 USP12O75317 370 aa18.27■□□□□ 0.52
VRK3-225ENST00000601912 PMPCBO75439 489 aa18.27■□□□□ 0.52
VRK3-225ENST00000601912 SPAG6O75602 509 aa18.27■□□□□ 0.52
VRK3-225ENST00000601912 SHBGP04278 402 aa18.27■□□□□ 0.52
VRK3-225ENST00000601912 POU3F3P20264 500 aaPredicted RBP18.27■□□□□ 0.52
VRK3-225ENST00000601912 CES1P23141 567 aa18.27■□□□□ 0.52
VRK3-225ENST00000601912 CD86P42081 329 aa18.27■□□□□ 0.52
VRK3-225ENST00000601912 MTHFRP42898 656 aa18.27■□□□□ 0.52
VRK3-225ENST00000601912 SESN2P58004 480 aaPredicted RBP18.27■□□□□ 0.52
VRK3-225ENST00000601912 DSC2Q02487 901 aa18.27■□□□□ 0.52
VRK3-225ENST00000601912 ZNF844Q08AG5 666 aa18.27■□□□□ 0.52
VRK3-225ENST00000601912 CDH17Q12864 832 aa18.27■□□□□ 0.52
VRK3-225ENST00000601912 PLEKHG6Q3KR16 790 aa18.27■□□□□ 0.52
VRK3-225ENST00000601912 UBAP2Q5T6F2 1119 aaKnown RBP18.27■□□□□ 0.52
VRK3-225ENST00000601912 CCNJLQ8IV13 435 aa18.27■□□□□ 0.52
VRK3-225ENST00000601912 APCDD1Q8J025 514 aa18.27■□□□□ 0.52
VRK3-225ENST00000601912 OR52K1Q8NGK4 314 aa18.27■□□□□ 0.52
VRK3-225ENST00000601912 RSPRY1Q96DX4 576 aa18.27■□□□□ 0.52
VRK3-225ENST00000601912 SIGLEC10Q96LC7 697 aa18.27■□□□□ 0.52
VRK3-225ENST00000601912 EBNA1BP2Q99848 306 aaKnown RBP18.27■□□□□ 0.52
VRK3-225ENST00000601912 SEMA3CQ99985 751 aa18.27■□□□□ 0.52
VRK3-225ENST00000601912 MGME1Q9BQP7 344 aa18.27■□□□□ 0.52
VRK3-225ENST00000601912 SLC2A11Q9BYW1 496 aa18.27■□□□□ 0.52
VRK3-225ENST00000601912 ABCB8Q9NUT2 735 aa18.27■□□□□ 0.52
VRK3-225ENST00000601912 FAM53CQ9NYF3 392 aa18.27■□□□□ 0.52
VRK3-225ENST00000601912 ZC3H7BQ9UGR2 993 aaKnown RBP18.27■□□□□ 0.52
VRK3-225ENST00000601912 TBX10O75333 385 aa18.26■□□□□ 0.51
VRK3-225ENST00000601912 ADH1CP00326 375 aa18.26■□□□□ 0.51
VRK3-225ENST00000601912 MYZAPP0CAP1 466 aa18.26■□□□□ 0.51
VRK3-225ENST00000601912 IGFBP4P22692 258 aa18.26■□□□□ 0.51
VRK3-225ENST00000601912 CD70P32970 193 aa18.26■□□□□ 0.51
VRK3-225ENST00000601912 NPY2RP49146 381 aa18.26■□□□□ 0.51
VRK3-225ENST00000601912 MLLT1Q03111 559 aaPredicted RBP18.26■□□□□ 0.51
VRK3-225ENST00000601912 NIPAL4Q0D2K0 466 aa18.26■□□□□ 0.51
VRK3-225ENST00000601912 STAT4Q14765 748 aa18.26■□□□□ 0.51
VRK3-225ENST00000601912 DHCR24Q15392 516 aa18.26■□□□□ 0.51
VRK3-225ENST00000601912 CASC4Q6P4E1 433 aa18.26■□□□□ 0.51
VRK3-225ENST00000601912 LINGO4Q6UY18 593 aa18.26■□□□□ 0.51
VRK3-225ENST00000601912 CAPN12Q6ZSI9 719 aa18.26■□□□□ 0.51
VRK3-225ENST00000601912 METTL3Q86U44 580 aaKnown RBP18.26■□□□□ 0.51
VRK3-225ENST00000601912 PRPF39Q86UA1 669 aaKnown RBP18.26■□□□□ 0.51
VRK3-225ENST00000601912 IGDCC3Q8IVU1 814 aa18.26■□□□□ 0.51
VRK3-225ENST00000601912 ARRDC2Q8TBH0 407 aa18.26■□□□□ 0.51
VRK3-225ENST00000601912 SH3GL2Q99962 352 aa18.26■□□□□ 0.51
VRK3-225ENST00000601912 WDR83Q9BRX9 315 aaKnown RBP18.26■□□□□ 0.51
VRK3-225ENST00000601912 NAT9Q9BTE0 207 aa18.26■□□□□ 0.51
VRK3-225ENST00000601912 ROPN1BQ9BZX4 212 aaPredicted RBP18.26■□□□□ 0.51
VRK3-225ENST00000601912 ROPN1Q9HAT0 212 aaPredicted RBP18.26■□□□□ 0.51
VRK3-225ENST00000601912 COLQQ9Y215 455 aaPredicted RBP18.26■□□□□ 0.51
VRK3-225ENST00000601912 ACTL7AQ9Y615 435 aa18.26■□□□□ 0.51
VRK3-225ENST00000601912 CXorf51AA0A1B0GTR3 108 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 NFATC1O95644 943 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 IVLP07476 585 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 GSTA2P09210 222 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 MGAT1P26572 445 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 WNT3AP56704 352 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 DLX2Q07687 328 aaPredicted RBP18.25■□□□□ 0.51
VRK3-225ENST00000601912 SLC20A2Q08357 652 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 CYTH1Q15438 398 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 EML3Q32P44 896 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 KRT71Q3SY84 523 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 ALG1LQ6GMV1 187 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 KRT222Q8N1A0 295 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 AGGF1Q8N302 714 aaeCLIP18.25■□□□□ 0.51
VRK3-225ENST00000601912 STAMBPL1Q96FJ0 436 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 CFAP36Q96G28 342 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 APOL2Q9BQE5 337 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 FICDQ9BVA6 458 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 TMEM109Q9BVC6 243 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 PIH1D1Q9NWS0 290 aaKnown RBP18.25■□□□□ 0.51
VRK3-225ENST00000601912 OGFRQ9NZT2 677 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 SAMD15Q9P1V8 674 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 MUSKO15146 869 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 TMCC1O94876 653 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 SYF2O95926 243 aaKnown RBP18.25■□□□□ 0.51
VRK3-225ENST00000601912 SERPINF2P08697 491 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 HLA-FP30511 346 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 SSTR1P30872 391 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 GBP2P32456 591 aaPredicted RBP18.25■□□□□ 0.51
VRK3-225ENST00000601912 ADRA1AP35348 466 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 GPX6P59796 221 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 OLIG2Q13516 323 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 DMC1Q14565 340 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms