RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 CHD5Q8TDI0 1954 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 SDK1Q7Z5N4 2213 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 A0A0A6YYK5 440 aaPredicted RBP15.47■□□□□ 0.07
LIG1-219ENST00000600055 A0A0U1RQJ8 604 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 MEI4A8MW99 385 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 GOLGA6L6A8MZA4 724 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 KPNA3O00505 521 aaPredicted RBP15.47■□□□□ 0.07
LIG1-219ENST00000600055 SPOPO43791 374 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 IPO7O95373 1038 aaKnown RBP15.47■□□□□ 0.07
LIG1-219ENST00000600055 GSRP00390 522 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 ZNF806P0C7X5 589 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 KDELR1P24390 212 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 SLC1A1P43005 524 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 INO80DQ53TQ3 878 aaPredicted RBP15.47■□□□□ 0.07
LIG1-219ENST00000600055 NCEH1Q6PIU2 408 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 PRR23CQ6ZRP0 262 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 SYT12Q8IV01 421 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 RGL4Q8IZJ4 473 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 CADM4Q8NFZ8 388 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 OR2AP1Q8NGE2 309 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 OR14C36Q8NHC7 312 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 FOXJ1Q92949 421 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 VOPP1Q96AW1 172 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 ZDHHC6Q9H6R6 413 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 VPS45Q9NRW7 570 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 RXFP3Q9NSD7 469 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 RCOR3Q9P2K3 495 aaPredicted RBP15.47■□□□□ 0.07
LIG1-219ENST00000600055 LHX3Q9UBR4 397 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 IPO11Q9UI26 975 aaKnown RBP15.47■□□□□ 0.07
LIG1-219ENST00000600055 FZD4Q9ULV1 537 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 ALG6Q9Y672 507 aa15.47■□□□□ 0.07
LIG1-219ENST00000600055 LRRD1A4D1F6 860 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 C3orf70A6NLC5 250 aaPredicted RBP15.46■□□□□ 0.07
LIG1-219ENST00000600055 MFSD11O43934 449 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 FSBPO95073 299 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 MAP3K6O95382 1288 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 PRNPP04156 253 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 VAV2P52735 878 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 ADPRHP54922 357 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 RHOAP61586 193 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 SNRPD1P62314 119 aaKnown RBP15.46■□□□□ 0.07
LIG1-219ENST00000600055 SFSWAPQ12872 951 aaKnown RBP15.46■□□□□ 0.07
LIG1-219ENST00000600055 MYLK3Q32MK0 819 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 AGBL4Q5VU57 503 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 NCBP2-AS2Q69YL0 99 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 MAP7D3Q8IWC1 876 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 PLPP6Q8IY26 295 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 PQLC3Q8N755 202 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 TPCN2Q8NHX9 752 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 CASKIN2Q8WXE0 1202 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 SNX19Q92543 992 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 FAM131CQ96AQ9 280 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 FAF2Q96CS3 445 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 EXOC2Q96KP1 924 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 ZNF670Q9BS34 389 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 GRPEL1Q9HAV7 217 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 SP110Q9HB58 689 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 FSCN3Q9NQT6 498 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 EVLQ9UI08 416 aaPredicted RBP15.46■□□□□ 0.07
LIG1-219ENST00000600055 SLCO1B1Q9Y6L6 691 aa15.46■□□□□ 0.07
LIG1-219ENST00000600055 NYNRINQ9P2P1 1898 aaKnown RBP15.46■□□□□ 0.06
LIG1-219ENST00000600055 KRIT1O00522 736 aa15.45■□□□□ 0.06
LIG1-219ENST00000600055 INSIG1O15503 277 aa15.45■□□□□ 0.06
LIG1-219ENST00000600055 GDF9O60383 454 aa15.45■□□□□ 0.06
LIG1-219ENST00000600055 PALMO75781 387 aa15.45■□□□□ 0.06
LIG1-219ENST00000600055 KRT1P04264 644 aa15.45■□□□□ 0.06
LIG1-219ENST00000600055 RGRP47804 291 aa15.45■□□□□ 0.06
LIG1-219ENST00000600055 GSDMDP57764 484 aa15.45■□□□□ 0.06
LIG1-219ENST00000600055 IL10RBQ08334 325 aa15.45■□□□□ 0.06
LIG1-219ENST00000600055 WDR45BQ5MNZ6 344 aa15.45■□□□□ 0.06
LIG1-219ENST00000600055 SYCP2LQ5T4T6 812 aa15.45■□□□□ 0.06
LIG1-219ENST00000600055 PIP5KL1Q5T9C9 394 aa15.45■□□□□ 0.06
LIG1-219ENST00000600055 LRRC38Q5VT99 294 aa15.45■□□□□ 0.06
LIG1-219ENST00000600055 PEAR1Q5VY43 1037 aaPredicted RBP15.45■□□□□ 0.06
LIG1-219ENST00000600055 KIAA0895LQ68EN5 471 aa15.45■□□□□ 0.06
LIG1-219ENST00000600055 KIAA1328Q86T90 577 aa15.45■□□□□ 0.06
LIG1-219ENST00000600055 RHOT1Q8IXI2 618 aa15.45■□□□□ 0.06
LIG1-219ENST00000600055 GPR161Q8N6U8 529 aaKnown RBP15.45■□□□□ 0.06
LIG1-219ENST00000600055 OR2T34Q8NGX1 318 aa15.45■□□□□ 0.06
LIG1-219ENST00000600055 DNASE2BQ8WZ79 361 aa15.45■□□□□ 0.06
LIG1-219ENST00000600055 RNF25Q96BH1 459 aaPredicted RBP15.45■□□□□ 0.06
LIG1-219ENST00000600055 BIRC7Q96CA5 298 aa15.45■□□□□ 0.06
LIG1-219ENST00000600055 MIR1-1HGQ9H1L0 117 aa15.45■□□□□ 0.06
LIG1-219ENST00000600055 TRIM10Q9UDY6 481 aa15.45■□□□□ 0.06
LIG1-219ENST00000600055 EIF2B4Q9UI10 523 aaKnown RBP15.45■□□□□ 0.06
LIG1-219ENST00000600055 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.45■□□□□ 0.06
LIG1-219ENST00000600055 SPAG17Q6Q759 2223 aa15.45■□□□□ 0.06
LIG1-219ENST00000600055 GOLGA6L3A6NEY3 463 aa15.44■□□□□ 0.06
LIG1-219ENST00000600055 LRRC72A6NJI9 287 aa15.44■□□□□ 0.06
LIG1-219ENST00000600055 PJA2O43164 708 aa15.44■□□□□ 0.06
LIG1-219ENST00000600055 PLRG1O43660 514 aaKnown RBP15.44■□□□□ 0.06
LIG1-219ENST00000600055 MAFKO60675 156 aa15.44■□□□□ 0.06
LIG1-219ENST00000600055 POP4O95707 220 aaKnown RBP15.44■□□□□ 0.06
LIG1-219ENST00000600055 IGSF6O95976 241 aa15.44■□□□□ 0.06
LIG1-219ENST00000600055 PEX11BO96011 259 aa15.44■□□□□ 0.06
LIG1-219ENST00000600055 IGHV4-34P06331 123 aa15.44■□□□□ 0.06
LIG1-219ENST00000600055 SERPINB6P35237 376 aa15.44■□□□□ 0.06
LIG1-219ENST00000600055 NAP1L1P55209 391 aaKnown RBP15.44■□□□□ 0.06
LIG1-219ENST00000600055 TAS2R38P59533 333 aa15.44■□□□□ 0.06
LIG1-219ENST00000600055 PPP2CBP62714 309 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms