RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 SNX11Q9Y5W9 270 aa23.02■■□□□ 1.28
CCDC9-204ENST00000599398 WASF2Q9Y6W5 498 aa23.02■■□□□ 1.28
CCDC9-204ENST00000599398 ZSCAN5CA6NGD5 496 aaPredicted RBP23.01■■□□□ 1.27
CCDC9-204ENST00000599398 WASH4PA8MWX3 477 aa23.01■■□□□ 1.27
CCDC9-204ENST00000599398 UPK3BL1B0FP48 263 aa23.01■■□□□ 1.27
CCDC9-204ENST00000599398 EIF3CLB5ME19 914 aaKnown RBP23.01■■□□□ 1.27
CCDC9-204ENST00000599398 RASA4BC9J798 803 aa23.01■■□□□ 1.27
CCDC9-204ENST00000599398 UPK3BL2E5RIL1 263 aa23.01■■□□□ 1.27
CCDC9-204ENST00000599398 RNF103O00237 685 aa23.01■■□□□ 1.27
CCDC9-204ENST00000599398 DAPK3O43293 454 aa23.01■■□□□ 1.27
CCDC9-204ENST00000599398 RASA4O43374 803 aa23.01■■□□□ 1.27
CCDC9-204ENST00000599398 LRCH4O75427 683 aa23.01■■□□□ 1.27
CCDC9-204ENST00000599398 CD59P13987 128 aa23.01■■□□□ 1.27
CCDC9-204ENST00000599398 YBEYP58557 167 aaPredicted RBP23.01■■□□□ 1.27
CCDC9-204ENST00000599398 PPP6R3Q5H9R7 873 aaPredicted RBP23.01■■□□□ 1.27
CCDC9-204ENST00000599398 CCDC122Q5T0U0 273 aa23.01■■□□□ 1.27
CCDC9-204ENST00000599398 PIP5KL1Q5T9C9 394 aa23.01■■□□□ 1.27
CCDC9-204ENST00000599398 SPECC1LQ69YQ0 1117 aa23.01■■□□□ 1.27
CCDC9-204ENST00000599398 ALKBH5Q6P6C2 394 aaKnown RBP23.01■■□□□ 1.27
CCDC9-204ENST00000599398 PIP4P1Q86T03 277 aa23.01■■□□□ 1.27
CCDC9-204ENST00000599398 PRPF39Q86UA1 669 aaKnown RBP23.01■■□□□ 1.27
CCDC9-204ENST00000599398 SKA1Q96BD8 255 aa23.01■■□□□ 1.27
CCDC9-204ENST00000599398 HMCESQ96FZ2 354 aa23.01■■□□□ 1.27
CCDC9-204ENST00000599398 KCTD15Q96SI1 283 aaPredicted RBP23.01■■□□□ 1.27
CCDC9-204ENST00000599398 EIF3CQ99613 913 aaKnown RBP23.01■■□□□ 1.27
CCDC9-204ENST00000599398 NCAPGQ9BPX3 1015 aa23.01■■□□□ 1.27
CCDC9-204ENST00000599398 DONSONQ9NYP3 566 aa23.01■■□□□ 1.27
CCDC9-204ENST00000599398 ARHGAP20Q9P2F6 1191 aa23.01■■□□□ 1.27
CCDC9-204ENST00000599398 FNDC3AQ9Y2H6 1198 aaKnown RBP23.01■■□□□ 1.27
CCDC9-204ENST00000599398 TP53BP1Q12888 1972 aaPredicted RBP23.01■■□□□ 1.27
CCDC9-204ENST00000599398 SNRPD1P62314 119 aaKnown RBP23■■□□□ 1.27
CCDC9-204ENST00000599398 TRIM14Q14142 442 aa23■■□□□ 1.27
CCDC9-204ENST00000599398 PARP15Q460N3 678 aa23■■□□□ 1.27
CCDC9-204ENST00000599398 ERN2Q76MJ5 926 aaKnown RBP23■■□□□ 1.27
CCDC9-204ENST00000599398 UMODL1-AS1Q8N2C9 162 aa23■■□□□ 1.27
CCDC9-204ENST00000599398 OR6K2Q8NGY2 324 aa23■■□□□ 1.27
CCDC9-204ENST00000599398 NUP85Q9BW27 656 aa23■■□□□ 1.27
CCDC9-204ENST00000599398 KLC2Q9H0B6 622 aa23■■□□□ 1.27
CCDC9-204ENST00000599398 PREBQ9HCU5 417 aa23■■□□□ 1.27
CCDC9-204ENST00000599398 TM7SF3Q9NS93 570 aa23■■□□□ 1.27
CCDC9-204ENST00000599398 C10orf142B7Z368 130 aa22.99■■□□□ 1.27
CCDC9-204ENST00000599398 LATO43561 262 aa22.99■■□□□ 1.27
CCDC9-204ENST00000599398 SH3BP5O60239 455 aa22.99■■□□□ 1.27
CCDC9-204ENST00000599398 TMCC1O94876 653 aa22.99■■□□□ 1.27
CCDC9-204ENST00000599398 CD38P28907 300 aa22.99■■□□□ 1.27
CCDC9-204ENST00000599398 EIF4A3P38919 411 aaKnown RBP22.99■■□□□ 1.27
CCDC9-204ENST00000599398 TAS2R38P59533 333 aa22.99■■□□□ 1.27
CCDC9-204ENST00000599398 SERINC3Q13530 473 aa22.99■■□□□ 1.27
CCDC9-204ENST00000599398 KCNT1Q5JUK3 1230 aa22.99■■□□□ 1.27
CCDC9-204ENST00000599398 TRIM69Q86WT6 500 aa22.99■■□□□ 1.27
CCDC9-204ENST00000599398 CELF6Q96J87 481 aaKnown RBP22.99■■□□□ 1.27
CCDC9-204ENST00000599398 HDAC8Q9BY41 377 aa22.99■■□□□ 1.27
CCDC9-204ENST00000599398 ANAPC7Q9UJX3 599 aa22.99■■□□□ 1.27
CCDC9-204ENST00000599398 KRIT1O00522 736 aa22.98■■□□□ 1.27
CCDC9-204ENST00000599398 KCNK3O14649 394 aa22.98■■□□□ 1.27
CCDC9-204ENST00000599398 VILLO15195 856 aa22.98■■□□□ 1.27
CCDC9-204ENST00000599398 RNGTTO60942 597 aaKnown RBP22.98■■□□□ 1.27
CCDC9-204ENST00000599398 GSRP00390 522 aa22.98■■□□□ 1.27
CCDC9-204ENST00000599398 TPM1P09493 284 aa22.98■■□□□ 1.27
CCDC9-204ENST00000599398 GKP32189 559 aa22.98■■□□□ 1.27
CCDC9-204ENST00000599398 PCK1P35558 622 aa22.98■■□□□ 1.27
CCDC9-204ENST00000599398 NEK3P51956 506 aa22.98■■□□□ 1.27
CCDC9-204ENST00000599398 PIGHQ14442 188 aaPredicted RBP22.98■■□□□ 1.27
CCDC9-204ENST00000599398 ACAP1Q15027 740 aa22.98■■□□□ 1.27
CCDC9-204ENST00000599398 SLC45A4Q5BKX6 768 aa22.98■■□□□ 1.27
CCDC9-204ENST00000599398 ATXN7L2Q5T6C5 722 aaPredicted RBP22.98■■□□□ 1.27
CCDC9-204ENST00000599398 NAPEPLDQ6IQ20 393 aa22.98■■□□□ 1.27
CCDC9-204ENST00000599398 RFX8Q6ZV50 586 aa22.98■■□□□ 1.27
CCDC9-204ENST00000599398 CYP4V2Q6ZWL3 525 aaPredicted RBP22.98■■□□□ 1.27
CCDC9-204ENST00000599398 PSTKQ8IV42 348 aaKnown RBP22.98■■□□□ 1.27
CCDC9-204ENST00000599398 NAXDQ8IW45 347 aa22.98■■□□□ 1.27
CCDC9-204ENST00000599398 PLPP6Q8IY26 295 aa22.98■■□□□ 1.27
CCDC9-204ENST00000599398 NETO2Q8NC67 525 aa22.98■■□□□ 1.27
CCDC9-204ENST00000599398 OR2AP1Q8NGE2 309 aa22.98■■□□□ 1.27
CCDC9-204ENST00000599398 BTBD6Q96KE9 485 aa22.98■■□□□ 1.27
CCDC9-204ENST00000599398 CAMK1GQ96NX5 476 aa22.98■■□□□ 1.27
CCDC9-204ENST00000599398 ZNHIT6Q9NWK9 470 aaKnown RBP22.98■■□□□ 1.27
CCDC9-204ENST00000599398 PCDHB9Q9Y5E1 797 aa22.98■■□□□ 1.27
CCDC9-204ENST00000599398 SPAARA0A1B0GVQ0 90 aa22.97■■□□□ 1.27
CCDC9-204ENST00000599398 WNT9AO14904 365 aa22.97■■□□□ 1.27
CCDC9-204ENST00000599398 PCDH8O95206 1070 aa22.97■■□□□ 1.27
CCDC9-204ENST00000599398 WNT1P04628 370 aa22.97■■□□□ 1.27
CCDC9-204ENST00000599398 CYP1A2P05177 515 aa22.97■■□□□ 1.27
CCDC9-204ENST00000599398 ZNF883P0CG24 379 aa22.97■■□□□ 1.27
CCDC9-204ENST00000599398 ITGB7P26010 798 aa22.97■■□□□ 1.27
CCDC9-204ENST00000599398 HNRNPH3P31942 346 aaKnown RBP22.97■■□□□ 1.27
CCDC9-204ENST00000599398 NUDT1P36639 197 aa22.97■■□□□ 1.27
CCDC9-204ENST00000599398 CTSKP43235 329 aa22.97■■□□□ 1.27
CCDC9-204ENST00000599398 NDST2P52849 883 aa22.97■■□□□ 1.27
CCDC9-204ENST00000599398 RHOAP61586 193 aa22.97■■□□□ 1.27
CCDC9-204ENST00000599398 TSR1Q2NL82 804 aaKnown RBP22.97■■□□□ 1.27
CCDC9-204ENST00000599398 SMTNL2Q2TAL5 461 aa22.97■■□□□ 1.27
CCDC9-204ENST00000599398 SETMARQ53H47 684 aaPredicted RBP22.97■■□□□ 1.27
CCDC9-204ENST00000599398 FBXL19Q6PCT2 694 aa22.97■■□□□ 1.27
CCDC9-204ENST00000599398 VSTM4Q8IW00 320 aa22.97■■□□□ 1.27
CCDC9-204ENST00000599398 OR8K1Q8NGG5 319 aa22.97■■□□□ 1.27
CCDC9-204ENST00000599398 SETD7Q8WTS6 366 aaKnown RBP22.97■■□□□ 1.27
CCDC9-204ENST00000599398 CASKIN2Q8WXE0 1202 aa22.97■■□□□ 1.27
CCDC9-204ENST00000599398 HSPH1Q92598 858 aa22.97■■□□□ 1.27
CCDC9-204ENST00000599398 ARHGEF26Q96DR7 871 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms