RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 FTLP02792 175 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 ITGB2P05107 769 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 TBC1D3HP0C7X1 549 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 RALAP11233 206 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 TGM2P21980 687 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 DGKAP23743 735 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 CCR10P46092 362 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 COG7P83436 770 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 PDCLQ13371 301 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 TGIF1Q15583 401 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 PTPN20Q4JDL3 420 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 MPPE1Q53F39 396 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 RAB41Q5JT25 222 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 TBC1D3GQ6DHY5 549 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 TBC1D3CQ6IPX1 549 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 MON1BQ7L1V2 547 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 PIGZQ86VD9 579 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 TBC1D3Q8IZP1 549 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 ARL14Q8N4G2 192 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 AADATQ8N5Z0 425 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 PRR11Q96HE9 360 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 CPXM1Q96SM3 734 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 SEPT11Q9NVA2 429 aaKnown RBP14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 TJP2Q9UDY2 1190 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 FZD4Q9ULV1 537 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 ENTPD2Q9Y5L3 495 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 ADGRG1Q9Y653 693 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 SLC12A8A0AV02 714 aa14.26□□□□□ -0.13
SHKBP1-218ENST00000598907 ATP5BP06576 529 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-218ENST00000598907 THEGLP0DJG4 465 aa14.26□□□□□ -0.13
SHKBP1-218ENST00000598907 SFTPCP11686 197 aa14.26□□□□□ -0.13
SHKBP1-218ENST00000598907 POLR2EP19388 210 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-218ENST00000598907 SLC8A1P32418 973 aa14.26□□□□□ -0.13
SHKBP1-218ENST00000598907 CD70P32970 193 aa14.26□□□□□ -0.13
SHKBP1-218ENST00000598907 NSFP46459 744 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-218ENST00000598907 DUSP3P51452 185 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-218ENST00000598907 GSCP56915 257 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-218ENST00000598907 SLC8A3P57103 927 aa14.26□□□□□ -0.13
SHKBP1-218ENST00000598907 C1QBPQ07021 282 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-218ENST00000598907 XKR5Q6UX68 686 aa14.26□□□□□ -0.13
SHKBP1-218ENST00000598907 RSRC2Q7L4I2 434 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-218ENST00000598907 DNAAF5Q86Y56 855 aa14.26□□□□□ -0.13
SHKBP1-218ENST00000598907 MCOLN2Q8IZK6 566 aa14.26□□□□□ -0.13
SHKBP1-218ENST00000598907 FAM26EQ8N5C1 309 aa14.26□□□□□ -0.13
SHKBP1-218ENST00000598907 WFDC5Q8TCV5 224 aa14.26□□□□□ -0.13
SHKBP1-218ENST00000598907 PPP1R13BQ96KQ4 1090 aa14.26□□□□□ -0.13
SHKBP1-218ENST00000598907 SYNDIG1Q9H7V2 258 aa14.26□□□□□ -0.13
SHKBP1-218ENST00000598907 INTUQ9ULD6 942 aa14.26□□□□□ -0.13
SHKBP1-218ENST00000598907 PCDHGA8Q9Y5G5 932 aa14.26□□□□□ -0.13
SHKBP1-218ENST00000598907 PCDHA13Q9Y5I0 950 aa14.26□□□□□ -0.13
SHKBP1-218ENST00000598907 LY6G6EA0A0G2JKS1 128 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 TCRBV5S1A1TA0A578 114 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 CPED1A4D0V7 1026 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 CLEC18AA5D8T8 446 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 ANKRD62A6NC57 917 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 TMCO5BA8MYB1 307 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 MAGEC1O60732 1142 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 GP1BAP07359 652 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 ALPPL2P10696 532 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 DEKP35659 375 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 MAGEA1P43355 309 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 ACADSBP45954 432 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 RGS7P49802 495 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 ST8SIA6P61647 398 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 CYP4F2P78329 520 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 KRT83P78385 493 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 FOXK1P85037 733 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 STAT4Q14765 748 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 SPA17Q15506 151 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 TBR1Q16650 682 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 CLEC18BQ6UXF7 455 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 SND1Q7KZF4 910 aaKnown RBP eCLIP14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 CLEC14AQ86T13 490 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 PRPF39Q86UA1 669 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 JAMLQ86YT9 394 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 SCML4Q8N228 414 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 CLEC18CQ8NCF0 446 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 ACRBPQ8NEB7 543 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 NOX5Q96PH1 765 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 DESI2Q9BSY9 194 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 SLC25A18Q9H1K4 315 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 ADAM22Q9P0K1 906 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 MARCH2Q9P0N8 246 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 USP3Q9Y6I4 520 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 U3KQA8 63 aa14.25□□□□□ -0.13
SHKBP1-218ENST00000598907 KIF26BQ2KJY2 2108 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 ABCA12Q86UK0 2595 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 E5RJQ4 531 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 PJA2O43164 708 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 LATO43561 262 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 NEBLO76041 1014 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 ERBB2P04626 1255 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 CALB1P05937 261 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 H2AFZP0C0S5 128 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 TMEM253P0C7T8 217 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 GIMD1P0DJR0 217 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 SGSHP51688 502 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 INHBCP55103 352 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 CDKN3Q16667 212 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms