RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 PMS2P1A4D2B8 440 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 POM121BA6NF01 834 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 CASC3O15234 703 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 RAD51BO15315 384 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 THAP12O43422 761 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 PAGE1O75459 146 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 CLDN11O75508 207 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 PCDH8O95206 1070 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 ALPPL2P10696 532 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 VAC14Q08AM6 782 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 FZD2Q14332 565 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 ISXQ2M1V0 245 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 ALFQ53S48 1182 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 ARSIQ5FYB1 569 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 ARTNQ5T4W7 220 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 ERN2Q76MJ5 926 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 ZNF683Q8IZ20 524 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 ATP11CQ8NB49 1132 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 MAPK15Q8TD08 544 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 CPXM1Q96SM3 734 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 HDAC8Q9BY41 377 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 DPH1Q9BZG8 443 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 ABCG4Q9H172 646 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 DNAJC28Q9NX36 388 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 VPS51Q9UID3 782 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 SATB2Q9UPW6 733 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 HS3ST3A1Q9Y663 406 aa16.82■□□□□ 0.28
SHKBP1-215ENST00000597649 A0A0D9SEW6 157 aa16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 NEMP2A6NFY4 417 aa16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 LRRC10BA6NIK2 292 aa16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 B8ZZF3 427 aa16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 MED7O43513 233 aa16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 LZTS3O60299 673 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 ZNF821O75541 412 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 PAK4O96013 591 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 GLI1P08151 1106 aa16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 SKOR1P84550 965 aa16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 NME3Q13232 169 aa16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 EXOC3L4Q17RC7 722 aa16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 MIIPQ5JXC2 388 aa16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 TPRG1LQ5T0D9 272 aa16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 OTUD1Q5VV17 481 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 GJB7Q6PEY0 223 aa16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 LINGO4Q6UY18 593 aa16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 ZNF548Q8NEK5 533 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 ATXN7L3BQ96GX2 97 aa16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 SLC46A1Q96NT5 459 aa16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 CRACR2AQ9BSW2 395 aa16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 SIK2Q9H0K1 926 aa16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 MUC3BQ9H195 1237 aa16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 RBSNQ9H1K0 784 aa16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 TNKS2Q9H2K2 1166 aa16.81■□□□□ 0.28
SHKBP1-215ENST00000597649 RP1P56715 2156 aa16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 GTPBP10A4D1E9 387 aaKnown RBP16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 LGALS16A8MUM7 142 aa16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 ADCY5O95622 1261 aa16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 CSF2P04141 144 aa16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 C6P13671 934 aa16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 TFE3P19532 575 aaPredicted RBP16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 GNA15P30679 374 aa16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 DUSP3P51452 185 aaPredicted RBP16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 CDH4P55283 916 aa16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 HNRNPKP61978 463 aaKnown RBP eCLIP16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 FANCCQ00597 558 aa16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 UBXN1Q04323 297 aa16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 CDKN3Q16667 212 aa16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 C3orf38Q5JPI3 329 aa16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 GUSBP11Q6P575 273 aa16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 IGF2-ASQ6U949 168 aa16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 DPY19L3Q6ZPD9 716 aa16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 FAM183BPQ6ZVS7 135 aa16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 PTAR1Q7Z6K3 402 aaPredicted RBP16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 GRIN3AQ8TCU5 1115 aa16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 PCMTD1Q96MG8 357 aaPredicted RBP16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 SLC17A9Q9BYT1 436 aa16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 USP29Q9HBJ7 922 aa16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 THSD1Q9NS62 852 aa16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 ASNSD1Q9NWL6 643 aa16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 FARP1Q9Y4F1 1045 aaPredicted RBP16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 ENTPD2Q9Y5L3 495 aa16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 TRPM6Q9BX84 2022 aa16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 AHCTF1Q8WYP5 2266 aa16.8■□□□□ 0.28
SHKBP1-215ENST00000597649 TLN1Q9Y490 2541 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 KIF26BQ2KJY2 2108 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 SPTY2D1-AS1A0A0U1RR47 76 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 CPED1A4D0V7 1026 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 A6NNZ2 444 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 K7ENP7 123 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 SPINT1O43278 529 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 HSF2BPO75031 334 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 LEFTY1O75610 366 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 ENDOD1O94919 500 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 PRNPP04156 253 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 UBASH3AP57075 661 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 KRT83P78385 493 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 APBA1Q02410 837 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 MAPK8IP2Q13387 824 aaPredicted RBP16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 EFHC1Q5JVL4 640 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 KIAA1614Q5VZ46 1190 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 INO80CQ6PI98 192 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms