RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 LRRC19Q9H756 370 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 PREBQ9HCU5 417 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 PCSK1NQ9UHG2 260 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 HPCAL4Q9UM19 191 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 ANKRD6Q9Y2G4 727 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 FCF1Q9Y324 198 aaKnown RBP13.3□□□□□ -0.28
USE1-207ENST00000596136 ACTL7AQ9Y615 435 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 A0A1W2PR77 199 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 RASA4BC9J798 803 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 KPNA3O00505 521 aaPredicted RBP13.29□□□□□ -0.28
USE1-207ENST00000596136 GIPC1O14908 333 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 RASA4O43374 803 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 PRPSAP2O60256 369 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 LEFTY1O75610 366 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 CER1O95813 267 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 GSRP00390 522 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 PMLP29590 882 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 CTSKP43235 329 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 CCNHP51946 323 aaPredicted RBP13.29□□□□□ -0.28
USE1-207ENST00000596136 NDST2P52849 883 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 TPI1P60174 286 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 PPP2CBP62714 309 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 PPP2CAP67775 309 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 TRIM14Q14142 442 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 NFKBIBQ15653 356 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 ZNF423Q2M1K9 1284 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 ASTE1Q2TB18 679 aaPredicted RBP13.29□□□□□ -0.28
USE1-207ENST00000596136 HLA-BQ31612 363 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 ARSIQ5FYB1 569 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 AFMIDQ63HM1 303 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 ERN2Q76MJ5 926 aaKnown RBP13.29□□□□□ -0.28
USE1-207ENST00000596136 VSTM4Q8IW00 320 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 OR8K1Q8NGG5 319 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 KLC2Q9H0B6 622 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 THAP2Q9H0W7 228 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 DHX35Q9H5Z1 703 aaKnown RBP13.29□□□□□ -0.28
USE1-207ENST00000596136 GAREM1Q9H706 876 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 GPATCH2LQ9NWQ4 482 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 MYO1AQ9UBC5 1043 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 DMTF1Q9Y222 760 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 PCDHGB2Q9Y5G2 931 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 ACACBO00763 2458 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 TRPM6Q9BX84 2022 aa13.29□□□□□ -0.28
USE1-207ENST00000596136 TMEM131Q92545 1883 aa13.28□□□□□ -0.28
USE1-207ENST00000596136 WNT1P04628 370 aa13.28□□□□□ -0.28
USE1-207ENST00000596136 ITGB7P26010 798 aa13.28□□□□□ -0.28
USE1-207ENST00000596136 IL1R2P27930 398 aa13.28□□□□□ -0.28
USE1-207ENST00000596136 MAPK8IP2Q13387 824 aaPredicted RBP13.28□□□□□ -0.28
USE1-207ENST00000596136 HNRNPDQ14103 355 aaKnown RBP13.28□□□□□ -0.28
USE1-207ENST00000596136 PIGHQ14442 188 aaPredicted RBP13.28□□□□□ -0.28
USE1-207ENST00000596136 DPYSL2Q16555 572 aa13.28□□□□□ -0.28
USE1-207ENST00000596136 POM121L1PQ3SYA9 428 aa13.28□□□□□ -0.28
USE1-207ENST00000596136 BOLA3Q53S33 107 aa13.28□□□□□ -0.28
USE1-207ENST00000596136 KCNT1Q5JUK3 1230 aa13.28□□□□□ -0.28
USE1-207ENST00000596136 CCDC122Q5T0U0 273 aa13.28□□□□□ -0.28
USE1-207ENST00000596136 RFX8Q6ZV50 586 aa13.28□□□□□ -0.28
USE1-207ENST00000596136 PRPF39Q86UA1 669 aaKnown RBP13.28□□□□□ -0.28
USE1-207ENST00000596136 DEFB124Q8NES8 71 aa13.28□□□□□ -0.28
USE1-207ENST00000596136 OR2AP1Q8NGE2 309 aa13.28□□□□□ -0.28
USE1-207ENST00000596136 HMCESQ96FZ2 354 aa13.28□□□□□ -0.28
USE1-207ENST00000596136 PPP1R16AQ96I34 528 aa13.28□□□□□ -0.28
USE1-207ENST00000596136 SLC6A18Q96N87 628 aa13.28□□□□□ -0.28
USE1-207ENST00000596136 KCTD15Q96SI1 283 aaPredicted RBP13.28□□□□□ -0.28
USE1-207ENST00000596136 SLC32A1Q9H598 525 aa13.28□□□□□ -0.28
USE1-207ENST00000596136 IL21RQ9HBE5 538 aa13.28□□□□□ -0.28
USE1-207ENST00000596136 MFHAS1Q9Y4C4 1052 aa13.28□□□□□ -0.28
USE1-207ENST00000596136 SNX11Q9Y5W9 270 aa13.28□□□□□ -0.28
USE1-207ENST00000596136 SSU72P8A0A1W2PR75 194 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 EEF2KO00418 725 aaKnown RBP13.27□□□□□ -0.29
USE1-207ENST00000596136 WNT9AO14904 365 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 BUB1O43683 1085 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 AP1G1O43747 822 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 DFNA5O60443 496 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 CBFA2T3O75081 653 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 TMCC1O94876 653 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 POP4O95707 220 aaKnown RBP13.27□□□□□ -0.29
USE1-207ENST00000596136 ERCC2P18074 760 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 CD38P28907 300 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 EIF4A3P38919 411 aaKnown RBP13.27□□□□□ -0.29
USE1-207ENST00000596136 SNRPD1P62314 119 aaKnown RBP13.27□□□□□ -0.29
USE1-207ENST00000596136 SHC2P98077 582 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 DPYSQ14117 519 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 SLC18A3Q16572 532 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 MYLK3Q32MK0 819 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 NAPEPLDQ6IQ20 393 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 IQCHQ86VS3 1027 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 ARHGAP12Q8IWW6 846 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 MFSD2AQ8NA29 543 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 GRIN3AQ8TCU5 1115 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 TEKT4Q8WW24 435 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 SKA1Q96BD8 255 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 ARHGEF26Q96DR7 871 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 SERAC1Q96JX3 654 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 NUP85Q9BW27 656 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 PDFQ9HBH1 243 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 DYRK4Q9NR20 520 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 TM7SF3Q9NS93 570 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 CWC15Q9P013 229 aaKnown RBP13.27□□□□□ -0.29
USE1-207ENST00000596136 IP6K2Q9UHH9 426 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 WASF3Q9UPY6 502 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms