RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 TCERG1LQ5VWI1 586 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 SYPL2Q5VXT5 272 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 KLHL10Q6JEL2 608 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 CXorf57Q6NSI4 855 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 TTI2Q6NXR4 508 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 PARGQ86W56 976 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 TTC39CQ8N584 583 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 FAM26EQ8N5C1 309 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 FBXL13Q8NEE6 735 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 SLC35F5Q8WV83 523 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 NELFBQ8WX92 580 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 JPH3Q8WXH2 748 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 IRGQQ8WZA9 623 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 TFAP2BQ92481 460 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 SLC17A9Q9BYT1 436 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 RAB20Q9NX57 234 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 ACSL6Q9UKU0 697 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 PNMA8BQ9ULN7 279 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 PADI4Q9UM07 663 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 CTNND2Q9UQB3 1225 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 HS3ST3A1Q9Y663 406 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 ICE1Q9Y2F5 2266 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 PRAMEF33A0A0G2JMD5 474 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 H3BM21 787 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 K7ERQ8 282 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 TPP1O14773 563 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 ALOX15BO15296 676 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 PRAMEF10O60809 474 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 CHRNA3P32297 505 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 RPIAP49247 311 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 CCL7P80098 99 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 CAMK4Q16566 473 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 PRRT3Q5FWE3 981 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 FOXR2Q6PJQ5 311 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 KYAT3Q6YP21 454 aaKnown RBP14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 TAC4Q86UU9 113 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 ZSCAN1Q8NBB4 408 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 CHST14Q8NCH0 376 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 SLC35C1Q96A29 364 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 CEP63Q96MT8 703 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 SERPINB11Q96P15 392 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 FEM1AQ9BSK4 669 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 LRRC4CQ9HCJ2 640 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 IGSF5Q9NSI5 407 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 FOXJ2Q9P0K8 574 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 SEPT10Q9P0V9 454 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 KIAA1468Q9P260 1216 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 GULP1Q9UBP9 304 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 ARMCX3Q9UH62 379 aaPredicted RBP14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 SLC25A13Q9UJS0 675 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 PLAAQ9Y263 795 aa14.06□□□□□ -0.16
SHKBP1-208ENST00000595726 BICDL2A1A5D9 508 aa14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 NVLO15381 856 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 YY2O15391 372 aa14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 CELA2BP08218 269 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 JMJD7P0C870 316 aa14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 SETSIPP0DME0 302 aa14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 ETV5P41161 510 aa14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 IRAK1P51617 712 aa14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 PAK1Q13153 545 aa14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 NCAPHQ15003 741 aa14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 TCEA2Q15560 299 aa14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 ARSIQ5FYB1 569 aa14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 CLEC17AQ6ZS10 378 aa14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 ERN2Q76MJ5 926 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 SDR16C5Q8N3Y7 309 aa14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 SH2D3CQ8N5H7 860 aa14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 OR2A12Q8NGT7 310 aa14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 WDR48Q8TAF3 677 aa14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 NAT6Q93015 286 aa14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 FAXDC2Q96IV6 333 aa14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 ZSWIM1Q9BR11 485 aa14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 CLPBQ9H078 707 aa14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 METTL14Q9HCE5 456 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 COQ4Q9Y3A0 265 aa14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 OR51B4Q9Y5P0 310 aa14.05□□□□□ -0.16
SHKBP1-208ENST00000595726 A0A1W2PQM1 296 aa14.04□□□□□ -0.16
SHKBP1-208ENST00000595726 F5H5T6 163 aa14.04□□□□□ -0.16
SHKBP1-208ENST00000595726 VDRP11473 427 aa14.04□□□□□ -0.16
SHKBP1-208ENST00000595726 SRCP12931 536 aa14.04□□□□□ -0.16
SHKBP1-208ENST00000595726 CASRP41180 1078 aa14.04□□□□□ -0.16
SHKBP1-208ENST00000595726 VASPP50552 380 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-208ENST00000595726 STX17P56962 302 aa14.04□□□□□ -0.16
SHKBP1-208ENST00000595726 PITX1P78337 314 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-208ENST00000595726 CENPCQ03188 943 aa14.04□□□□□ -0.16
SHKBP1-208ENST00000595726 KCNAB2Q13303 367 aa14.04□□□□□ -0.16
SHKBP1-208ENST00000595726 LCLAT1Q6UWP7 414 aa14.04□□□□□ -0.16
SHKBP1-208ENST00000595726 GRIN3AQ8TCU5 1115 aa14.04□□□□□ -0.16
SHKBP1-208ENST00000595726 GLMNQ92990 594 aa14.04□□□□□ -0.16
SHKBP1-208ENST00000595726 USP7Q93009 1102 aa14.04□□□□□ -0.16
SHKBP1-208ENST00000595726 CCDC74AQ96AQ1 378 aa14.04□□□□□ -0.16
SHKBP1-208ENST00000595726 GFM1Q96RP9 751 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-208ENST00000595726 KLF6Q99612 283 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-208ENST00000595726 PRMT1Q99873 361 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-208ENST00000595726 STRADBQ9C0K7 418 aa14.04□□□□□ -0.16
SHKBP1-208ENST00000595726 ZNF71Q9NQZ8 489 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-208ENST00000595726 DYRK4Q9NR20 520 aa14.04□□□□□ -0.16
SHKBP1-208ENST00000595726 SIRPGQ9P1W8 387 aa14.04□□□□□ -0.16
SHKBP1-208ENST00000595726 SPASTQ9UBP0 616 aa14.04□□□□□ -0.16
SHKBP1-208ENST00000595726 APOBEC3BQ9UH17 382 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms