RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 ATAD1Q8NBU5 361 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 ZNF296Q8WUU4 475 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 SLC35B4Q969S0 331 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 FBXO6Q9NRD1 293 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 SYBUQ9NX95 663 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 ITGB1BP2Q9UKP3 347 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 MAGED2Q9UNF1 606 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 PCDHB7Q9Y5E2 793 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 NUP205Q92621 2012 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 ENPP3O14638 875 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 SOAT2O75908 522 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 OR6B1O95007 311 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 SNRPAP09012 282 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 DLDP09622 509 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 CCR1P32246 355 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 EMP3P54852 163 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 GALNT2Q10471 571 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 GPNMBQ14956 572 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 CTXN3Q4LDR2 81 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 MROH9Q5TGP6 573 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 DUS1LQ6P1R4 473 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 RAPH1Q70E73 1250 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 OR52K1Q8NGK4 314 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 GAB3Q8WWW8 586 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 HDAC11Q96DB2 347 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 FAM111AQ96PZ2 611 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 BTBD9Q96Q07 612 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 KLHL4Q9C0H6 718 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 ARHGEF38Q9NXL2 777 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 PLK2Q9NYY3 685 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 UBP1Q9NZI7 540 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 PPM1HQ9ULR3 514 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 RAD54BQ9Y620 910 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 NLRC5Q86WI3 1866 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 FRMPD3Q5JV73 1810 aa17.34■□□□□ 0.37
SHKBP1-205ENST00000594973 FAM159BA6NKW6 160 aa17.33■□□□□ 0.37
SHKBP1-205ENST00000594973 TMEM189-UBE2V1I3L0A0 370 aa17.33■□□□□ 0.37
SHKBP1-205ENST00000594973 JCHAINP01591 159 aa17.33■□□□□ 0.37
SHKBP1-205ENST00000594973 CD68P34810 354 aaPredicted RBP17.33■□□□□ 0.37
SHKBP1-205ENST00000594973 PDK3Q15120 406 aa17.33■□□□□ 0.37
SHKBP1-205ENST00000594973 ANKRD20A4Q4UJ75 823 aa17.33■□□□□ 0.37
SHKBP1-205ENST00000594973 UGT2A3Q6UWM9 527 aa17.33■□□□□ 0.37
SHKBP1-205ENST00000594973 ARHGAP36Q6ZRI8 547 aa17.33■□□□□ 0.37
SHKBP1-205ENST00000594973 USP33Q8TEY7 942 aa17.33■□□□□ 0.37
SHKBP1-205ENST00000594973 ARNTL2Q8WYA1 636 aa17.33■□□□□ 0.37
SHKBP1-205ENST00000594973 MTBPQ96DY7 904 aa17.33■□□□□ 0.37
SHKBP1-205ENST00000594973 PRR11Q96HE9 360 aaPredicted RBP17.33■□□□□ 0.37
SHKBP1-205ENST00000594973 APOPT1Q96IL0 206 aa17.33■□□□□ 0.37
SHKBP1-205ENST00000594973 FCRL2Q96LA5 508 aaPredicted RBP17.33■□□□□ 0.37
SHKBP1-205ENST00000594973 GPR62Q9BZJ7 368 aa17.33■□□□□ 0.37
SHKBP1-205ENST00000594973 OSBPL2Q9H1P3 480 aa17.33■□□□□ 0.37
SHKBP1-205ENST00000594973 SMOC2Q9H3U7 446 aa17.33■□□□□ 0.37
SHKBP1-205ENST00000594973 S100A14Q9HCY8 104 aa17.33■□□□□ 0.37
SHKBP1-205ENST00000594973 ADAM28Q9UKQ2 775 aa17.33■□□□□ 0.37
SHKBP1-205ENST00000594973 PTPRDP23468 1912 aa17.33■□□□□ 0.36
SHKBP1-205ENST00000594973 CAPN14A8MX76 684 aa17.33■□□□□ 0.36
SHKBP1-205ENST00000594973 NT5C1B-RDH14C9J2C7 533 aa17.33■□□□□ 0.36
SHKBP1-205ENST00000594973 GNRH1P01148 92 aa17.33■□□□□ 0.36
SHKBP1-205ENST00000594973 PLOD1Q02809 727 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-205ENST00000594973 TBL3Q12788 808 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-205ENST00000594973 EIF4EBP2Q13542 120 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-205ENST00000594973 LGSNQ5TDP6 509 aa17.33■□□□□ 0.36
SHKBP1-205ENST00000594973 C1orf146Q5VVC0 180 aa17.33■□□□□ 0.36
SHKBP1-205ENST00000594973 SH2D5Q6ZV89 423 aa17.33■□□□□ 0.36
SHKBP1-205ENST00000594973 BEND5Q7L4P6 421 aa17.33■□□□□ 0.36
SHKBP1-205ENST00000594973 CHSY1Q86X52 802 aa17.33■□□□□ 0.36
SHKBP1-205ENST00000594973 NUP93Q8N1F7 819 aa17.33■□□□□ 0.36
SHKBP1-205ENST00000594973 DNAAF3Q8N9W5 541 aa17.33■□□□□ 0.36
SHKBP1-205ENST00000594973 ABTB1Q969K4 478 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-205ENST00000594973 ZFRQ96KR1 1074 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-205ENST00000594973 APOL2Q9BQE5 337 aa17.33■□□□□ 0.36
SHKBP1-205ENST00000594973 SLC13A1Q9BZW2 595 aa17.33■□□□□ 0.36
SHKBP1-205ENST00000594973 C1orf21Q9H246 121 aa17.33■□□□□ 0.36
SHKBP1-205ENST00000594973 SLC7A8Q9UHI5 535 aa17.33■□□□□ 0.36
SHKBP1-205ENST00000594973 ZNF180Q9UJW8 692 aa17.33■□□□□ 0.36
SHKBP1-205ENST00000594973 E2F6O75461 281 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 SMIM18P0DKX4 95 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 NFKB1P19838 968 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 HTRA3P83110 453 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 TBCCQ15814 346 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 NFE2Q16621 373 aaPredicted RBP17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 SLC44A4Q53GD3 710 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 TEX44Q53QW1 395 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 RBM44Q6ZP01 1051 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 RBM15BQ8NDT2 890 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 TTC17Q96AE7 1141 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 YIPF2Q9BWQ6 316 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 MOCS1Q9NZB8 636 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 NEU3Q9UQ49 428 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 DMTF1Q9Y222 760 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 SLC27A5Q9Y2P5 690 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 ARHGAP10A1A4S6 786 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 COPEO14579 308 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 PQBP1O60828 265 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 ZNF189O75820 626 aaPredicted RBP17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 KRT38O76015 456 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 PGAM1P18669 254 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 ZNF135P52742 658 aaPredicted RBP17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 IRX4P78413 519 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 SLC18A2Q05940 514 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms