RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 PPP1R2P3Q6NXS1 205 aa23.93■■□□□ 1.42
LSM4-204ENST00000594828 PYROXD2Q8N2H3 581 aa23.93■■□□□ 1.42
LSM4-204ENST00000594828 ISG20Q96AZ6 181 aaKnown RBP23.93■■□□□ 1.42
LSM4-204ENST00000594828 VCPIP1Q96JH7 1222 aa23.93■■□□□ 1.42
LSM4-204ENST00000594828 CNPY3Q9BT09 278 aa23.93■■□□□ 1.42
LSM4-204ENST00000594828 ZMIZ1Q9ULJ6 1067 aa23.93■■□□□ 1.42
LSM4-204ENST00000594828 EPG5Q9HCE0 2579 aa23.93■■□□□ 1.42
LSM4-204ENST00000594828 LRRC53A6NM62 1247 aa23.92■■□□□ 1.42
LSM4-204ENST00000594828 SLC31A1O15431 190 aa23.92■■□□□ 1.42
LSM4-204ENST00000594828 PCDH8O95206 1070 aa23.92■■□□□ 1.42
LSM4-204ENST00000594828 CCNHP51946 323 aaPredicted RBP23.92■■□□□ 1.42
LSM4-204ENST00000594828 HORMAD1Q86X24 394 aa23.92■■□□□ 1.42
LSM4-204ENST00000594828 SPATS2Q86XZ4 545 aaKnown RBP23.92■■□□□ 1.42
LSM4-204ENST00000594828 PLPP6Q8IY26 295 aa23.92■■□□□ 1.42
LSM4-204ENST00000594828 OXR1Q8N573 874 aa23.92■■□□□ 1.42
LSM4-204ENST00000594828 SAP25Q8TEE9 199 aa23.92■■□□□ 1.42
LSM4-204ENST00000594828 KLK6Q92876 244 aa23.92■■□□□ 1.42
LSM4-204ENST00000594828 SYT11Q9BT88 431 aa23.92■■□□□ 1.42
LSM4-204ENST00000594828 TAS2R14Q9NYV8 317 aa23.92■■□□□ 1.42
LSM4-204ENST00000594828 HECAQ9UBI9 543 aaPredicted RBP23.92■■□□□ 1.42
LSM4-204ENST00000594828 TMCO5BA8MYB1 307 aa23.91■■□□□ 1.42
LSM4-204ENST00000594828 DESP17661 470 aa23.91■■□□□ 1.42
LSM4-204ENST00000594828 EPHB2P29323 1055 aa23.91■■□□□ 1.42
LSM4-204ENST00000594828 NEK3P51956 506 aa23.91■■□□□ 1.42
LSM4-204ENST00000594828 AIF1P55008 147 aa23.91■■□□□ 1.42
LSM4-204ENST00000594828 RYBPQ8N488 228 aaPredicted RBP23.91■■□□□ 1.42
LSM4-204ENST00000594828 TM6SF2Q9BZW4 377 aa23.91■■□□□ 1.42
LSM4-204ENST00000594828 FTSJ1Q9UET6 329 aa23.91■■□□□ 1.42
LSM4-204ENST00000594828 FZD10Q9ULW2 581 aa23.91■■□□□ 1.42
LSM4-204ENST00000594828 CA5BQ9Y2D0 317 aa23.91■■□□□ 1.42
LSM4-204ENST00000594828 CABIN1Q9Y6J0 2220 aa23.91■■□□□ 1.42
LSM4-204ENST00000594828 A0A1W2PQC6 194 aa23.9■■□□□ 1.42
LSM4-204ENST00000594828 KDELR3O43731 214 aa23.9■■□□□ 1.42
LSM4-204ENST00000594828 CREB3O43889 395 aa23.9■■□□□ 1.42
LSM4-204ENST00000594828 DKK1O94907 266 aa23.9■■□□□ 1.42
LSM4-204ENST00000594828 PRLRP16471 622 aa23.9■■□□□ 1.42
LSM4-204ENST00000594828 ITGB7P26010 798 aa23.9■■□□□ 1.42
LSM4-204ENST00000594828 EPHA8P29322 1005 aaPredicted RBP23.9■■□□□ 1.42
LSM4-204ENST00000594828 RXRGP48443 463 aa23.9■■□□□ 1.42
LSM4-204ENST00000594828 ASIC2Q16515 512 aa23.9■■□□□ 1.42
LSM4-204ENST00000594828 ZNF284Q2VY69 593 aa23.9■■□□□ 1.42
LSM4-204ENST00000594828 FBXL19Q6PCT2 694 aa23.9■■□□□ 1.42
LSM4-204ENST00000594828 ZNF354CQ86Y25 554 aa23.9■■□□□ 1.42
LSM4-204ENST00000594828 RTL3Q8N8U3 475 aaKnown RBP23.9■■□□□ 1.42
LSM4-204ENST00000594828 KLHDC7BQ96G42 594 aa23.9■■□□□ 1.42
LSM4-204ENST00000594828 NAP1L5Q96NT1 182 aaPredicted RBP23.9■■□□□ 1.42
LSM4-204ENST00000594828 ZDHHC6Q9H6R6 413 aa23.9■■□□□ 1.42
LSM4-204ENST00000594828 PARVAQ9NVD7 372 aa23.9■■□□□ 1.42
LSM4-204ENST00000594828 KMT2BQ9UMN6 2715 aaPredicted RBP23.9■■□□□ 1.42
LSM4-204ENST00000594828 CACNA1BQ00975 2339 aa23.89■■□□□ 1.42
LSM4-204ENST00000594828 TP53BP1Q12888 1972 aaPredicted RBP23.89■■□□□ 1.42
LSM4-204ENST00000594828 A0A1B0GTH6 734 aa23.89■■□□□ 1.41
LSM4-204ENST00000594828 ADRB3P13945 408 aa23.89■■□□□ 1.41
LSM4-204ENST00000594828 OGDHQ02218 1023 aa23.89■■□□□ 1.41
LSM4-204ENST00000594828 BNIP3Q12983 259 aa23.89■■□□□ 1.41
LSM4-204ENST00000594828 MAMLD1Q13495 774 aa23.89■■□□□ 1.41
LSM4-204ENST00000594828 SFMBT2Q5VUG0 894 aa23.89■■□□□ 1.41
LSM4-204ENST00000594828 CCNI2Q6ZMN8 369 aaPredicted RBP23.89■■□□□ 1.41
LSM4-204ENST00000594828 LEKR1Q6ZMV7 388 aa23.89■■□□□ 1.41
LSM4-204ENST00000594828 TMEM145Q8NBT3 493 aa23.89■■□□□ 1.41
LSM4-204ENST00000594828 ZCCHC14Q8WYQ9 949 aaKnown RBP23.89■■□□□ 1.41
LSM4-204ENST00000594828 LRIG1Q96JA1 1093 aa23.89■■□□□ 1.41
LSM4-204ENST00000594828 EPAS1Q99814 870 aa23.89■■□□□ 1.41
LSM4-204ENST00000594828 MYOCQ99972 504 aa23.89■■□□□ 1.41
LSM4-204ENST00000594828 HAUS4Q9H6D7 363 aa23.89■■□□□ 1.41
LSM4-204ENST00000594828 AIPL1Q9NZN9 384 aa23.89■■□□□ 1.41
LSM4-204ENST00000594828 ZFR2Q9UPR6 939 aaKnown RBP23.89■■□□□ 1.41
LSM4-204ENST00000594828 ZSCAN5CA6NGD5 496 aaPredicted RBP23.88■■□□□ 1.41
LSM4-204ENST00000594828 BUB1O43683 1085 aa23.88■■□□□ 1.41
LSM4-204ENST00000594828 SERPINC1P01008 464 aa23.88■■□□□ 1.41
LSM4-204ENST00000594828 HNRNPA2B1P22626 353 aaKnown RBP23.88■■□□□ 1.41
LSM4-204ENST00000594828 AKT2P31751 481 aa23.88■■□□□ 1.41
LSM4-204ENST00000594828 SNRPD1P62314 119 aaKnown RBP23.88■■□□□ 1.41
LSM4-204ENST00000594828 IQCB1Q15051 598 aa23.88■■□□□ 1.41
LSM4-204ENST00000594828 CCDC157Q569K6 752 aa23.88■■□□□ 1.41
LSM4-204ENST00000594828 TMPRSS7Q7RTY8 843 aa23.88■■□□□ 1.41
LSM4-204ENST00000594828 TMC6Q7Z403 805 aa23.88■■□□□ 1.41
LSM4-204ENST00000594828 EID2Q8N6I1 236 aa23.88■■□□□ 1.41
LSM4-204ENST00000594828 OR2AP1Q8NGE2 309 aa23.88■■□□□ 1.41
LSM4-204ENST00000594828 OR6K2Q8NGY2 324 aa23.88■■□□□ 1.41
LSM4-204ENST00000594828 FEM1CQ96JP0 617 aa23.88■■□□□ 1.41
LSM4-204ENST00000594828 FUCA2Q9BTY2 467 aa23.88■■□□□ 1.41
LSM4-204ENST00000594828 CATSPERBQ9H7T0 1116 aa23.88■■□□□ 1.41
LSM4-204ENST00000594828 FRYQ5TBA9 3013 aa23.88■■□□□ 1.41
LSM4-204ENST00000594828 DOCK9Q9BZ29 2069 aa23.87■■□□□ 1.41
LSM4-204ENST00000594828 POP4O95707 220 aaKnown RBP23.87■■□□□ 1.41
LSM4-204ENST00000594828 LDOC1O95751 146 aaPredicted RBP23.87■■□□□ 1.41
LSM4-204ENST00000594828 GSRP00390 522 aa23.87■■□□□ 1.41
LSM4-204ENST00000594828 THEGLP0DJG4 465 aa23.87■■□□□ 1.41
LSM4-204ENST00000594828 GKP32189 559 aa23.87■■□□□ 1.41
LSM4-204ENST00000594828 YBEYP58557 167 aaPredicted RBP23.87■■□□□ 1.41
LSM4-204ENST00000594828 NR1I3Q14994 352 aa23.87■■□□□ 1.41
LSM4-204ENST00000594828 SEL1L3Q68CR1 1132 aa23.87■■□□□ 1.41
LSM4-204ENST00000594828 PLEKHA7Q6IQ23 1121 aa23.87■■□□□ 1.41
LSM4-204ENST00000594828 ZNF571Q7Z3V5 609 aaPredicted RBP23.87■■□□□ 1.41
LSM4-204ENST00000594828 CNDP2Q96KP4 475 aaKnown RBP23.87■■□□□ 1.41
LSM4-204ENST00000594828 NOL6Q9H6R4 1146 aaKnown RBP23.87■■□□□ 1.41
LSM4-204ENST00000594828 FZD3Q9NPG1 666 aa23.87■■□□□ 1.41
LSM4-204ENST00000594828 FADS3Q9Y5Q0 445 aa23.87■■□□□ 1.41
LSM4-204ENST00000594828 CEP295Q9C0D2 2601 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms