RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 LZTR1Q8N653 840 aa20■□□□□ 0.79
LSM4-203ENST00000593829 TPCN2Q8NHX9 752 aa20■□□□□ 0.79
LSM4-203ENST00000593829 FRS2Q8WU20 508 aa20■□□□□ 0.79
LSM4-203ENST00000593829 GAB3Q8WWW8 586 aa20■□□□□ 0.79
LSM4-203ENST00000593829 ZBTB9Q96C00 473 aa20■□□□□ 0.79
LSM4-203ENST00000593829 SLC6A17Q9H1V8 727 aa20■□□□□ 0.79
LSM4-203ENST00000593829 LRRC19Q9H756 370 aa20■□□□□ 0.79
LSM4-203ENST00000593829 GDF3Q9NR23 364 aa20■□□□□ 0.79
LSM4-203ENST00000593829 CKAP5Q14008 2032 aa19.99■□□□□ 0.79
LSM4-203ENST00000593829 BUB1O43683 1085 aa19.99■□□□□ 0.79
LSM4-203ENST00000593829 KDELR3O43731 214 aa19.99■□□□□ 0.79
LSM4-203ENST00000593829 CD48P09326 243 aa19.99■□□□□ 0.79
LSM4-203ENST00000593829 AMPD1P23109 780 aa19.99■□□□□ 0.79
LSM4-203ENST00000593829 GEMIN4P57678 1058 aaKnown RBP19.99■□□□□ 0.79
LSM4-203ENST00000593829 GNGT1P63211 74 aa19.99■□□□□ 0.79
LSM4-203ENST00000593829 ARF5P84085 180 aa19.99■□□□□ 0.79
LSM4-203ENST00000593829 BYSLQ13895 437 aaKnown RBP19.99■□□□□ 0.79
LSM4-203ENST00000593829 DPYSL3Q14195 570 aa19.99■□□□□ 0.79
LSM4-203ENST00000593829 CCDC181Q5TID7 509 aa19.99■□□□□ 0.79
LSM4-203ENST00000593829 C11orf63Q6NUN7 778 aa19.99■□□□□ 0.79
LSM4-203ENST00000593829 KIAA1324Q6UXG2 1013 aaKnown RBP19.99■□□□□ 0.79
LSM4-203ENST00000593829 B4GALNT4Q76KP1 1039 aa19.99■□□□□ 0.79
LSM4-203ENST00000593829 RHOT1Q8IXI2 618 aa19.99■□□□□ 0.79
LSM4-203ENST00000593829 BCAS4Q8TDM0 211 aa19.99■□□□□ 0.79
LSM4-203ENST00000593829 PRCCQ92733 491 aaPredicted RBP19.99■□□□□ 0.79
LSM4-203ENST00000593829 PTPRN2Q92932 1015 aa19.99■□□□□ 0.79
LSM4-203ENST00000593829 SIPA1Q96FS4 1042 aa19.99■□□□□ 0.79
LSM4-203ENST00000593829 HMCESQ96FZ2 354 aa19.99■□□□□ 0.79
LSM4-203ENST00000593829 CALN1Q9BXU9 219 aa19.99■□□□□ 0.79
LSM4-203ENST00000593829 KLHL11Q9NVR0 708 aa19.99■□□□□ 0.79
LSM4-203ENST00000593829 ZSCAN5CA6NGD5 496 aaPredicted RBP19.98■□□□□ 0.79
LSM4-203ENST00000593829 IL4RP24394 825 aa19.98■□□□□ 0.79
LSM4-203ENST00000593829 SRSF5Q13243 272 aaKnown RBP19.98■□□□□ 0.79
LSM4-203ENST00000593829 SERINC3Q13530 473 aa19.98■□□□□ 0.79
LSM4-203ENST00000593829 IFT20Q8IY31 132 aa19.98■□□□□ 0.79
LSM4-203ENST00000593829 CELF6Q96J87 481 aaKnown RBP19.98■□□□□ 0.79
LSM4-203ENST00000593829 ZNF670Q9BS34 389 aa19.98■□□□□ 0.79
LSM4-203ENST00000593829 KLC2Q9H0B6 622 aa19.98■□□□□ 0.79
LSM4-203ENST00000593829 FANCMQ8IYD8 2048 aa19.98■□□□□ 0.79
LSM4-203ENST00000593829 GRID2IPA4D2P6 1211 aa19.98■□□□□ 0.79
LSM4-203ENST00000593829 ARHGAP42A6NI28 874 aa19.98■□□□□ 0.79
LSM4-203ENST00000593829 PROB1E7EW31 1015 aa19.98■□□□□ 0.79
LSM4-203ENST00000593829 K7ERQ8 282 aa19.98■□□□□ 0.79
LSM4-203ENST00000593829 DCLK1O15075 740 aa19.98■□□□□ 0.79
LSM4-203ENST00000593829 ZNF217O75362 1048 aa19.98■□□□□ 0.79
LSM4-203ENST00000593829 SERPINH1P50454 418 aaKnown RBP19.98■□□□□ 0.79
LSM4-203ENST00000593829 MMRN1Q13201 1228 aa19.98■□□□□ 0.79
LSM4-203ENST00000593829 C8orf74Q6P047 294 aa19.98■□□□□ 0.79
LSM4-203ENST00000593829 CEP68Q76N32 757 aa19.98■□□□□ 0.79
LSM4-203ENST00000593829 DAAM2Q86T65 1068 aa19.98■□□□□ 0.79
LSM4-203ENST00000593829 METTL3Q86U44 580 aaKnown RBP19.98■□□□□ 0.79
LSM4-203ENST00000593829 EIF1ADQ8N9N8 165 aaKnown RBP19.98■□□□□ 0.79
LSM4-203ENST00000593829 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.98■□□□□ 0.79
LSM4-203ENST00000593829 SPACA7Q96KW9 195 aa19.98■□□□□ 0.79
LSM4-203ENST00000593829 RUFY1Q96T51 708 aa19.98■□□□□ 0.79
LSM4-203ENST00000593829 TLR10Q9BXR5 811 aa19.98■□□□□ 0.79
LSM4-203ENST00000593829 SLC39A8Q9C0K1 460 aa19.98■□□□□ 0.79
LSM4-203ENST00000593829 RSPH9Q9H1X1 276 aaPredicted RBP19.98■□□□□ 0.79
LSM4-203ENST00000593829 SMAD6O43541 496 aaKnown RBP19.97■□□□□ 0.79
LSM4-203ENST00000593829 RNASEH1O60930 286 aaKnown RBP19.97■□□□□ 0.79
LSM4-203ENST00000593829 VAV1P15498 845 aa19.97■□□□□ 0.79
LSM4-203ENST00000593829 SIM2Q14190 667 aaPredicted RBP19.97■□□□□ 0.79
LSM4-203ENST00000593829 TTMPQ5BVD1 217 aa19.97■□□□□ 0.79
LSM4-203ENST00000593829 AFMIDQ63HM1 303 aa19.97■□□□□ 0.79
LSM4-203ENST00000593829 KDM7AQ6ZMT4 941 aa19.97■□□□□ 0.79
LSM4-203ENST00000593829 IQCKQ8N0W5 287 aa19.97■□□□□ 0.79
LSM4-203ENST00000593829 NPWQ8N729 165 aa19.97■□□□□ 0.79
LSM4-203ENST00000593829 TSEN2Q8NCE0 465 aaKnown RBP19.97■□□□□ 0.79
LSM4-203ENST00000593829 RLN3Q8WXF3 142 aa19.97■□□□□ 0.79
LSM4-203ENST00000593829 RAPGEF5Q92565 580 aa19.97■□□□□ 0.79
LSM4-203ENST00000593829 PHOX2BQ99453 314 aa19.97■□□□□ 0.79
LSM4-203ENST00000593829 CEP44Q9C0F1 390 aa19.97■□□□□ 0.79
LSM4-203ENST00000593829 GOLPH3Q9H4A6 298 aa19.97■□□□□ 0.79
LSM4-203ENST00000593829 ETNK2Q9NVF9 386 aa19.97■□□□□ 0.79
LSM4-203ENST00000593829 DDX56Q9NY93 547 aaKnown RBP19.97■□□□□ 0.79
LSM4-203ENST00000593829 INVSQ9Y283 1065 aa19.97■□□□□ 0.79
LSM4-203ENST00000593829 CHD5Q8TDI0 1954 aa19.97■□□□□ 0.79
LSM4-203ENST00000593829 C7P10643 843 aa19.96■□□□□ 0.79
LSM4-203ENST00000593829 ACADMP11310 421 aa19.96■□□□□ 0.79
LSM4-203ENST00000593829 KDELR1P24390 212 aa19.96■□□□□ 0.79
LSM4-203ENST00000593829 P2RY2P41231 377 aa19.96■□□□□ 0.79
LSM4-203ENST00000593829 ELAVL3Q14576 367 aaKnown RBP19.96■□□□□ 0.79
LSM4-203ENST00000593829 IFI16Q16666 785 aaKnown RBP19.96■□□□□ 0.79
LSM4-203ENST00000593829 MAP7D1Q3KQU3 841 aa19.96■□□□□ 0.79
LSM4-203ENST00000593829 ANKRD20A8PQ5CZ79 823 aa19.96■□□□□ 0.79
LSM4-203ENST00000593829 ZNF776Q68DI1 518 aaPredicted RBP19.96■□□□□ 0.79
LSM4-203ENST00000593829 Q6ZVU0 165 aa19.96■□□□□ 0.79
LSM4-203ENST00000593829 STK40Q8N2I9 435 aa19.96■□□□□ 0.79
LSM4-203ENST00000593829 NKD2Q969F2 451 aaPredicted RBP19.96■□□□□ 0.79
LSM4-203ENST00000593829 LRRD1A4D1F6 860 aa19.96■□□□□ 0.79
LSM4-203ENST00000593829 PSTPIP1O43586 416 aa19.96■□□□□ 0.79
LSM4-203ENST00000593829 CD160O95971 181 aa19.96■□□□□ 0.79
LSM4-203ENST00000593829 SERPINB6P35237 376 aa19.96■□□□□ 0.79
LSM4-203ENST00000593829 PAPOLAP51003 745 aaKnown RBP19.96■□□□□ 0.79
LSM4-203ENST00000593829 RPS14P62263 151 aaKnown RBP19.96■□□□□ 0.79
LSM4-203ENST00000593829 ZBTB16Q05516 673 aa19.96■□□□□ 0.79
LSM4-203ENST00000593829 ODF2Q5BJF6 829 aa19.96■□□□□ 0.79
LSM4-203ENST00000593829 C22orf39Q6P5X5 142 aa19.96■□□□□ 0.79
LSM4-203ENST00000593829 PRR23BQ6ZRT6 265 aa19.96■□□□□ 0.79
LSM4-203ENST00000593829 C11orf74Q86VG3 221 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms