RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 RPS21P63220 83 aaKnown RBP24.39■■□□□ 1.49
LSM4-202ENST00000593564 DCP2Q8IU60 420 aaKnown RBP24.39■■□□□ 1.49
LSM4-202ENST00000593564 SNIP1Q8TAD8 396 aaKnown RBP24.39■■□□□ 1.49
LSM4-202ENST00000593564 GPR27Q9NS67 375 aa24.39■■□□□ 1.49
LSM4-202ENST00000593564 HS3ST3A1Q9Y663 406 aa24.39■■□□□ 1.49
LSM4-202ENST00000593564 MYLKQ15746 1914 aa24.38■■□□□ 1.49
LSM4-202ENST00000593564 FFAR2O15552 330 aa24.38■■□□□ 1.49
LSM4-202ENST00000593564 CKMT1AP12532 417 aa24.38■■□□□ 1.49
LSM4-202ENST00000593564 ITPKBP27987 946 aa24.38■■□□□ 1.49
LSM4-202ENST00000593564 CCNHP51946 323 aaPredicted RBP24.38■■□□□ 1.49
LSM4-202ENST00000593564 CARD16Q5EG05 197 aa24.38■■□□□ 1.49
LSM4-202ENST00000593564 LRRC69Q6ZNQ3 347 aa24.38■■□□□ 1.49
LSM4-202ENST00000593564 Q6ZSR6 202 aa24.38■■□□□ 1.49
LSM4-202ENST00000593564 DRC7Q8IY82 874 aa24.38■■□□□ 1.49
LSM4-202ENST00000593564 FEM1CQ96JP0 617 aa24.38■■□□□ 1.49
LSM4-202ENST00000593564 BMFQ96LC9 184 aa24.38■■□□□ 1.49
LSM4-202ENST00000593564 SLC17A9Q9BYT1 436 aa24.38■■□□□ 1.49
LSM4-202ENST00000593564 METTL5Q9NRN9 209 aaKnown RBP24.38■■□□□ 1.49
LSM4-202ENST00000593564 NLGN3Q9NZ94 848 aa24.38■■□□□ 1.49
LSM4-202ENST00000593564 FCF1Q9Y324 198 aaKnown RBP24.38■■□□□ 1.49
LSM4-202ENST00000593564 FADS3Q9Y5Q0 445 aa24.38■■□□□ 1.49
LSM4-202ENST00000593564 RRP8O43159 456 aaKnown RBP24.37■■□□□ 1.49
LSM4-202ENST00000593564 AP1G1O43747 822 aa24.37■■□□□ 1.49
LSM4-202ENST00000593564 MT-CO3P00414 261 aa24.37■■□□□ 1.49
LSM4-202ENST00000593564 ALPPL2P10696 532 aa24.37■■□□□ 1.49
LSM4-202ENST00000593564 ETFBP38117 255 aa24.37■■□□□ 1.49
LSM4-202ENST00000593564 DNA2P51530 1060 aa24.37■■□□□ 1.49
LSM4-202ENST00000593564 ATP11AP98196 1134 aa24.37■■□□□ 1.49
LSM4-202ENST00000593564 NRG1Q02297 640 aaPredicted RBP24.37■■□□□ 1.49
LSM4-202ENST00000593564 FGL2Q14314 439 aa24.37■■□□□ 1.49
LSM4-202ENST00000593564 KYAT3Q6YP21 454 aaKnown RBP24.37■■□□□ 1.49
LSM4-202ENST00000593564 PTAR1Q7Z6K3 402 aaPredicted RBP24.37■■□□□ 1.49
LSM4-202ENST00000593564 ZSCAN30Q86W11 494 aa24.37■■□□□ 1.49
LSM4-202ENST00000593564 ZNF677Q86XU0 584 aa24.37■■□□□ 1.49
LSM4-202ENST00000593564 PLPP6Q8IY26 295 aa24.37■■□□□ 1.49
LSM4-202ENST00000593564 EMC1Q8N766 993 aa24.37■■□□□ 1.49
LSM4-202ENST00000593564 BAP1Q92560 729 aa24.37■■□□□ 1.49
LSM4-202ENST00000593564 ISG20Q96AZ6 181 aaKnown RBP24.37■■□□□ 1.49
LSM4-202ENST00000593564 RETREG1Q9H6L5 497 aa24.37■■□□□ 1.49
LSM4-202ENST00000593564 SAMSN1Q9NSI8 373 aaKnown RBP24.37■■□□□ 1.49
LSM4-202ENST00000593564 NOCTQ9UK39 431 aaKnown RBP24.37■■□□□ 1.49
LSM4-202ENST00000593564 TRPM6Q9BX84 2022 aa24.36■■□□□ 1.49
LSM4-202ENST00000593564 BRINP1O60477 761 aa24.36■■□□□ 1.49
LSM4-202ENST00000593564 CD160O95971 181 aa24.36■■□□□ 1.49
LSM4-202ENST00000593564 EEF1GP26641 437 aaKnown RBP24.36■■□□□ 1.49
LSM4-202ENST00000593564 MAPK8IP2Q13387 824 aaPredicted RBP24.36■■□□□ 1.49
LSM4-202ENST00000593564 TCP11X2Q5H9J9 407 aa24.36■■□□□ 1.49
LSM4-202ENST00000593564 MANEALQ5VSG8 457 aa24.36■■□□□ 1.49
LSM4-202ENST00000593564 PARS2Q7L3T8 475 aaKnown RBP24.36■■□□□ 1.49
LSM4-202ENST00000593564 HECAQ9UBI9 543 aaPredicted RBP24.36■■□□□ 1.49
LSM4-202ENST00000593564 OR12D3Q9UGF7 316 aa24.36■■□□□ 1.49
LSM4-202ENST00000593564 PTPRQQ9UMZ3 2332 aa24.36■■□□□ 1.49
LSM4-202ENST00000593564 POM121BA6NF01 834 aa24.35■■□□□ 1.49
LSM4-202ENST00000593564 NEMP2A6NFY4 417 aa24.35■■□□□ 1.49
LSM4-202ENST00000593564 SCAMP1O15126 338 aa24.35■■□□□ 1.49
LSM4-202ENST00000593564 RAD51BO15315 384 aa24.35■■□□□ 1.49
LSM4-202ENST00000593564 PAK4O96013 591 aaPredicted RBP24.35■■□□□ 1.49
LSM4-202ENST00000593564 CYP1A1P04798 512 aaPredicted RBP24.35■■□□□ 1.49
LSM4-202ENST00000593564 MMP8P22894 467 aa24.35■■□□□ 1.49
LSM4-202ENST00000593564 ADRA1BP35368 520 aa24.35■■□□□ 1.49
LSM4-202ENST00000593564 ACVRL1P37023 503 aa24.35■■□□□ 1.49
LSM4-202ENST00000593564 MAPKAPK2P49137 400 aa24.35■■□□□ 1.49
LSM4-202ENST00000593564 HNRNPKP61978 463 aaKnown RBP eCLIP24.35■■□□□ 1.49
LSM4-202ENST00000593564 ARL13BQ3SXY8 428 aa24.35■■□□□ 1.49
LSM4-202ENST00000593564 CT47A1Q5JQC4 288 aaPredicted RBP24.35■■□□□ 1.49
LSM4-202ENST00000593564 CDCP2Q5VXM1 449 aa24.35■■□□□ 1.49
LSM4-202ENST00000593564 TMC6Q7Z403 805 aa24.35■■□□□ 1.49
LSM4-202ENST00000593564 NLRP14Q86W24 1093 aa24.35■■□□□ 1.49
LSM4-202ENST00000593564 FAM181AQ8N9Y4 354 aa24.35■■□□□ 1.49
LSM4-202ENST00000593564 SLC20A1Q8WUM9 679 aa24.35■■□□□ 1.49
LSM4-202ENST00000593564 FGF11Q92914 225 aa24.35■■□□□ 1.49
LSM4-202ENST00000593564 UBL7Q96S82 380 aaPredicted RBP24.35■■□□□ 1.49
LSM4-202ENST00000593564 DUSP23Q9BVJ7 150 aa24.35■■□□□ 1.49
LSM4-202ENST00000593564 PRORYQ9H606 182 aa24.35■■□□□ 1.49
LSM4-202ENST00000593564 ZDHHC6Q9H6R6 413 aa24.35■■□□□ 1.49
LSM4-202ENST00000593564 CAAP1Q9H8G2 361 aa24.35■■□□□ 1.49
LSM4-202ENST00000593564 USP29Q9HBJ7 922 aa24.35■■□□□ 1.49
LSM4-202ENST00000593564 DNAJC28Q9NX36 388 aa24.35■■□□□ 1.49
LSM4-202ENST00000593564 ACTL7AQ9Y615 435 aa24.35■■□□□ 1.49
LSM4-202ENST00000593564 EIF4E1BA6NMX2 242 aaKnown RBP24.34■■□□□ 1.49
LSM4-202ENST00000593564 GP1BAP07359 652 aa24.34■■□□□ 1.49
LSM4-202ENST00000593564 RHOQP17081 205 aa24.34■■□□□ 1.49
LSM4-202ENST00000593564 ACTN2P35609 894 aa24.34■■□□□ 1.49
LSM4-202ENST00000593564 GEMIN4P57678 1058 aaKnown RBP24.34■■□□□ 1.49
LSM4-202ENST00000593564 CDR2Q01850 454 aa24.34■■□□□ 1.49
LSM4-202ENST00000593564 FZD2Q14332 565 aa24.34■■□□□ 1.49
LSM4-202ENST00000593564 CCDC14Q49A88 953 aa24.34■■□□□ 1.49
LSM4-202ENST00000593564 RAB6CQ53S08 254 aa24.34■■□□□ 1.49
LSM4-202ENST00000593564 KDM7AQ6ZMT4 941 aa24.34■■□□□ 1.49
LSM4-202ENST00000593564 RXFP2Q8WXD0 754 aa24.34■■□□□ 1.49
LSM4-202ENST00000593564 RAB7BQ96AH8 199 aa24.34■■□□□ 1.49
LSM4-202ENST00000593564 APOLD1Q96LR9 279 aa24.34■■□□□ 1.49
LSM4-202ENST00000593564 LENG8Q96PV6 779 aaPredicted RBP24.34■■□□□ 1.49
LSM4-202ENST00000593564 TM6SF2Q9BZW4 377 aa24.34■■□□□ 1.49
LSM4-202ENST00000593564 RAB6CQ9H0N0 254 aa24.34■■□□□ 1.49
LSM4-202ENST00000593564 OSBPL2Q9H1P3 480 aa24.34■■□□□ 1.49
LSM4-202ENST00000593564 GANQ9H2C0 597 aa24.34■■□□□ 1.49
LSM4-202ENST00000593564 NDFIP2Q9NV92 336 aa24.34■■□□□ 1.49
LSM4-202ENST00000593564 BPTFQ12830 3046 aa24.33■■□□□ 1.49
LSM4-202ENST00000593564 LY6G6EA0A0G2JKS1 128 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms