RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 NPIPB5A8MRT5 1133 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 KCNJ18B7U540 433 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 NPIPB4C9JG80 1138 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 CYP4B1P13584 511 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 ACP5P13686 325 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 PNPLA4P41247 253 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 RPS6KA3P51812 740 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 TERF1P54274 439 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 GEMIN4P57678 1058 aaKnown RBP5.32□□□□□ -1.56
SMAD4-216ENST00000593223 CCDC184Q52MB2 194 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 ALG10Q5BKT4 473 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 FAM133BQ5BKY9 247 aaKnown RBP5.32□□□□□ -1.56
SMAD4-216ENST00000593223 ALG10BQ5I7T1 473 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 ZNF484Q5JVG2 852 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 TTC39AQ5SRH9 613 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 MANEAQ5SRI9 462 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 HMBOX1Q6NT76 420 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 MTFR2Q6P444 385 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 RTL10Q7L3V2 364 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 RNF144BQ7Z419 303 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 TTC30BQ8N4P2 665 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 ANKRD44Q8N8A2 993 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 NRACQ8N912 160 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 MPLKIPQ8TAP9 179 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 EME1Q96AY2 570 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 KTI12Q96EK9 354 aaPredicted RBP5.32□□□□□ -1.56
SMAD4-216ENST00000593223 CLMNQ96JQ2 1002 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 ZSCAN31Q96LW9 406 aaPredicted RBP5.32□□□□□ -1.56
SMAD4-216ENST00000593223 FCRL4Q96PJ5 515 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 TWSG1Q9GZX9 223 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 ACAD9Q9H845 621 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 DECR2Q9NUI1 292 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 POT1Q9NUX5 634 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 CLIC5Q9NZA1 410 aa5.32□□□□□ -1.56
SMAD4-216ENST00000593223 SPHKAPQ2M3C7 1700 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 PLXNC1O60486 1568 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 NRKQ7Z2Y5 1582 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 A0A1W2PPC1 479 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 DYTNA2CJ06 578 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 STX16-NPEPL1H3BU86 382 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 STX16O14662 325 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 HLA-DQA2P01906 255 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 WNT1P04628 370 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 RPN1P04843 607 aaKnown RBP5.31□□□□□ -1.56
SMAD4-216ENST00000593223 CSF1P09603 554 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 KLRC2P26717 231 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 CYP2J2P51589 502 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 GOLGA8FQ08AF8 430 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 PPFIA1Q13136 1202 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 ALDH1L2Q3SY69 923 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 CCDC92Q53HC0 331 aaPredicted RBP5.31□□□□□ -1.56
SMAD4-216ENST00000593223 FAM171A1Q5VUB5 890 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 ANKRD23Q86SG2 305 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 IGFN1Q86VF2 1251 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 CCDC25Q86WR0 208 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 ANKRD18AQ8IVF6 992 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 SCN4BQ8IWT1 228 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 TMEM217Q8N7C4 229 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 ZNF548Q8NEK5 533 aaPredicted RBP5.31□□□□□ -1.56
SMAD4-216ENST00000593223 LINS1Q8NG48 757 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 COG8Q96MW5 612 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 NOD2Q9HC29 1040 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 THAP1Q9NVV9 213 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 LUZP4Q9P127 313 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 NKTRP30414 1462 aaKnown RBP5.31□□□□□ -1.56
SMAD4-216ENST00000593223 PTCH1Q13635 1447 aa5.31□□□□□ -1.56
SMAD4-216ENST00000593223 SAMD9LQ8IVG5 1584 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 ASXL1Q8IXJ9 1541 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 FOXO6A8MYZ6 492 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 TLX3O43711 291 aaPredicted RBP5.3□□□□□ -1.56
SMAD4-216ENST00000593223 NEURL1O76050 574 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 SYF2O95926 243 aaKnown RBP5.3□□□□□ -1.56
SMAD4-216ENST00000593223 BMP15O95972 392 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 LCKP06239 509 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 TNNT1P13805 278 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 TYK2P29597 1187 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 ALDH7A1P49419 539 aaKnown RBP5.3□□□□□ -1.56
SMAD4-216ENST00000593223 RHAGQ02094 409 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 ZBTB16Q05516 673 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 BIRC3Q13489 604 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 THOC5Q13769 683 aaKnown RBP5.3□□□□□ -1.56
SMAD4-216ENST00000593223 INPP5JQ15735 1006 aaPredicted RBP5.3□□□□□ -1.56
SMAD4-216ENST00000593223 CTXN3Q4LDR2 81 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 PIK3CD-AS1Q5SR53 167 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 COLCA1Q6ZS62 124 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 PIM3Q86V86 326 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 ZNF354CQ86Y25 554 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 UNC5CLQ8IV45 518 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 SKA1Q96BD8 255 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 NLRP4Q96MN2 994 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 PYM1Q9BRP8 204 aaKnown RBP5.3□□□□□ -1.56
SMAD4-216ENST00000593223 WDR83Q9BRX9 315 aaKnown RBP5.3□□□□□ -1.56
SMAD4-216ENST00000593223 HERC2P3Q9BVR0 1158 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 CADM1Q9BY67 442 aaKnown RBP5.3□□□□□ -1.56
SMAD4-216ENST00000593223 TMEM248Q9NWD8 314 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.3□□□□□ -1.56
SMAD4-216ENST00000593223 DISP2A7MBM2 1401 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 ATP10DQ9P241 1426 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 MROH1Q8NDA8 1641 aa5.3□□□□□ -1.56
SMAD4-216ENST00000593223 SLIT1O75093 1534 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms