RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 OBP2AQ9NY56 170 aa13.71□□□□□ -0.21
VMP1-217ENST00000593168 RSPH14Q9UHP6 348 aa13.71□□□□□ -0.21
VMP1-217ENST00000593168 NYNRINQ9P2P1 1898 aaKnown RBP13.71□□□□□ -0.21
VMP1-217ENST00000593168 MYO18AQ92614 2054 aaKnown RBP13.71□□□□□ -0.21
VMP1-217ENST00000593168 NUP210Q8TEM1 1887 aaPredicted RBP13.7□□□□□ -0.22
VMP1-217ENST00000593168 A0A0D9SEW6 157 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 ERI2A8K979 691 aaKnown RBP13.7□□□□□ -0.22
VMP1-217ENST00000593168 E7ESA3 106 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 ALOX15BO15296 676 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 PSMD3O43242 534 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 SASH3O75995 380 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 APRTP07741 180 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 GLULP15104 373 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 PSMB4P28070 264 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 HOXD9P28356 352 aaPredicted RBP13.7□□□□□ -0.22
VMP1-217ENST00000593168 ARL4CP56559 192 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 CDH18Q13634 790 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 PRPSAP1Q14558 356 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 HIF1AQ16665 826 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 FAM182AQ5T1J6 154 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 FYB2Q5VWT5 728 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 RNF219Q5W0B1 726 aaPredicted RBP13.7□□□□□ -0.22
VMP1-217ENST00000593168 ALS2CLQ60I27 953 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 IL31Q6EBC2 164 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 CENPUQ71F23 418 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 CCDC25Q86WR0 208 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 ZNF354CQ86Y25 554 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 IQCKQ8N0W5 287 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 PDIK1LQ8N165 341 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 DCLK2Q8N568 766 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 ZNF557Q8N988 423 aaPredicted RBP13.7□□□□□ -0.22
VMP1-217ENST00000593168 FIBINQ8TAL6 211 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 IRF7Q92985 503 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 ASB16Q96NS5 453 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 FCRL5Q96RD9 977 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 RBM15Q96T37 977 aaKnown RBP eCLIP13.7□□□□□ -0.22
VMP1-217ENST00000593168 SPON2Q9BUD6 331 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 PABPC3Q9H361 631 aaKnown RBP13.7□□□□□ -0.22
VMP1-217ENST00000593168 TRPV4Q9HBA0 871 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 GLOD4Q9HC38 313 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 HPCAL4Q9UM19 191 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 ATP8A1Q9Y2Q0 1164 aa13.7□□□□□ -0.22
VMP1-217ENST00000593168 GOLGA6CA6NDK9 693 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 GOLGA6BA6NDN3 693 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 PENKP01210 267 aaPredicted RBP13.69□□□□□ -0.22
VMP1-217ENST00000593168 GOLGA6DP0CG33 693 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 MLNP12872 115 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 NFKB1P19838 968 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 HSD17B3P37058 310 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 MAGEA4P43358 317 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 PLK1P53350 603 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 SLC10A7Q0GE19 358 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 SLC12A1Q13621 1099 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 RFTN1Q14699 578 aaPredicted RBP13.69□□□□□ -0.22
VMP1-217ENST00000593168 UAP1Q16222 522 aaPredicted RBP13.69□□□□□ -0.22
VMP1-217ENST00000593168 FSCBQ5H9T9 825 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 FAM78AQ5JUQ0 283 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 TMCO4Q5TGY1 634 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 TPGS1Q6ZTW0 290 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 MFN1Q8IWA4 741 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 ADGRG2Q8IZP9 1017 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 PDCD7Q8N8D1 485 aaKnown RBP13.69□□□□□ -0.22
VMP1-217ENST00000593168 USP33Q8TEY7 942 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 NXPE3Q969Y0 559 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 ALG14Q96F25 216 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 PWWP2AQ96N64 755 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 MUC3BQ9H195 1237 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 LINC00597Q9H2U6 94 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 ACBD3Q9H3P7 528 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 XAB2Q9HCS7 855 aaKnown RBP13.69□□□□□ -0.22
VMP1-217ENST00000593168 ATP13A1Q9HD20 1204 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 ARHGEF3Q9NR81 526 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 SPHK2Q9NRA0 654 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 GOLGA6AQ9NYA3 693 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 MARK1Q9P0L2 795 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 KIAA1522Q9P206 1035 aaPredicted RBP13.69□□□□□ -0.22
VMP1-217ENST00000593168 CDH7Q9ULB5 785 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 AAR2Q9Y312 384 aaKnown RBP13.69□□□□□ -0.22
VMP1-217ENST00000593168 SIT1Q9Y3P8 196 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 OR51B4Q9Y5P0 310 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 OTOGLQ3ZCN5 2332 aa13.69□□□□□ -0.22
VMP1-217ENST00000593168 CACNA1IQ9P0X4 2223 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 CXorf51AA0A1B0GTR3 108 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 ANHXE9PGG2 379 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 GOLGA8MH3BSY2 632 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 ANXA9O76027 345 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 NEBLO76041 1014 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 SUN1O94901 812 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 AP2A1O95782 977 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 HLA-DQB2P05538 268 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 LAMP2P13473 410 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 MMP13P45452 471 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 LMAN1P49257 510 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 GAD2Q05329 585 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 HTR4Q13639 388 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 PUM1Q14671 1186 aaKnown RBP eCLIP13.68□□□□□ -0.22
VMP1-217ENST00000593168 LBRQ14739 615 aaKnown RBP13.68□□□□□ -0.22
VMP1-217ENST00000593168 CFAP58Q5T655 872 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 KCTD11Q693B1 232 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 LRRC8BQ6P9F7 803 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms