RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 FAM72BQ86X60 149 aa23.74■■□□□ 1.39
MBD3-211ENST00000592965 AOPEPQ8N6M6 819 aa23.74■■□□□ 1.39
MBD3-211ENST00000592965 ISG20Q96AZ6 181 aaKnown RBP23.74■■□□□ 1.39
MBD3-211ENST00000592965 NDFIP2Q9NV92 336 aa23.74■■□□□ 1.39
MBD3-211ENST00000592965 SEPT11Q9NVA2 429 aaKnown RBP23.74■■□□□ 1.39
MBD3-211ENST00000592965 ITPR1Q14643 2758 aa23.74■■□□□ 1.39
MBD3-211ENST00000592965 GOLGA8CPA6NN73 597 aa23.73■■□□□ 1.39
MBD3-211ENST00000592965 SRRM3A6NNA2 597 aaPredicted RBP23.73■■□□□ 1.39
MBD3-211ENST00000592965 CD160O95971 181 aa23.73■■□□□ 1.39
MBD3-211ENST00000592965 ITGB7P26010 798 aa23.73■■□□□ 1.39
MBD3-211ENST00000592965 CCNHP51946 323 aaPredicted RBP23.73■■□□□ 1.39
MBD3-211ENST00000592965 GEMIN4P57678 1058 aaKnown RBP23.73■■□□□ 1.39
MBD3-211ENST00000592965 ZNF284Q2VY69 593 aa23.73■■□□□ 1.39
MBD3-211ENST00000592965 CARD16Q5EG05 197 aa23.73■■□□□ 1.39
MBD3-211ENST00000592965 DNAJC24Q6P3W2 148 aa23.73■■□□□ 1.39
MBD3-211ENST00000592965 PLPP6Q8IY26 295 aa23.73■■□□□ 1.39
MBD3-211ENST00000592965 ARHGEF2Q92974 986 aaKnown RBP23.73■■□□□ 1.39
MBD3-211ENST00000592965 HEPHQ9BQS7 1158 aa23.73■■□□□ 1.39
MBD3-211ENST00000592965 NAT10Q9H0A0 1025 aaKnown RBP23.73■■□□□ 1.39
MBD3-211ENST00000592965 MAGEH1Q9H213 219 aa23.73■■□□□ 1.39
MBD3-211ENST00000592965 CCDC172P0C7W6 258 aa23.72■■□□□ 1.39
MBD3-211ENST00000592965 FERP16591 822 aa23.72■■□□□ 1.39
MBD3-211ENST00000592965 NEK3P51956 506 aa23.72■■□□□ 1.39
MBD3-211ENST00000592965 ZNF143P52747 638 aaPredicted RBP23.72■■□□□ 1.39
MBD3-211ENST00000592965 SFMBT2Q5VUG0 894 aa23.72■■□□□ 1.39
MBD3-211ENST00000592965 KANSL1Q7Z3B3 1105 aa23.72■■□□□ 1.39
MBD3-211ENST00000592965 GALNT15Q8N3T1 639 aa23.72■■□□□ 1.39
MBD3-211ENST00000592965 DNAI1Q9UI46 699 aa23.72■■□□□ 1.39
MBD3-211ENST00000592965 FCF1Q9Y324 198 aaKnown RBP23.72■■□□□ 1.39
MBD3-211ENST00000592965 PCDHGA1Q9Y5H4 931 aa23.72■■□□□ 1.39
MBD3-211ENST00000592965 RAMP2O60895 175 aa23.71■■□□□ 1.39
MBD3-211ENST00000592965 PRLRP16471 622 aa23.71■■□□□ 1.39
MBD3-211ENST00000592965 L1CAMP32004 1257 aa23.71■■□□□ 1.39
MBD3-211ENST00000592965 SMAD1Q15797 465 aaKnown RBP23.71■■□□□ 1.39
MBD3-211ENST00000592965 TMEM259Q4ZIN3 620 aa23.71■■□□□ 1.39
MBD3-211ENST00000592965 PPP1R15BQ5SWA1 713 aa23.71■■□□□ 1.39
MBD3-211ENST00000592965 SLFN11Q7Z7L1 901 aa23.71■■□□□ 1.39
MBD3-211ENST00000592965 KLHDC7BQ96G42 594 aa23.71■■□□□ 1.39
MBD3-211ENST00000592965 BPIFA3Q9BQP9 254 aa23.71■■□□□ 1.39
MBD3-211ENST00000592965 MAGEB5Q9BZ81 275 aa23.71■■□□□ 1.39
MBD3-211ENST00000592965 TMEM63CQ9P1W3 806 aa23.71■■□□□ 1.39
MBD3-211ENST00000592965 MYO6Q9UM54 1294 aa23.71■■□□□ 1.39
MBD3-211ENST00000592965 CA5BQ9Y2D0 317 aa23.71■■□□□ 1.39
MBD3-211ENST00000592965 ANKRD62A6NC57 917 aa23.7■■□□□ 1.38
MBD3-211ENST00000592965 ENC1O14682 589 aa23.7■■□□□ 1.38
MBD3-211ENST00000592965 SLC31A1O15431 190 aa23.7■■□□□ 1.38
MBD3-211ENST00000592965 CCP110O43303 1012 aa23.7■■□□□ 1.38
MBD3-211ENST00000592965 ADRB3P13945 408 aa23.7■■□□□ 1.38
MBD3-211ENST00000592965 HNRNPA2B1P22626 353 aaKnown RBP23.7■■□□□ 1.38
MBD3-211ENST00000592965 AKT2P31751 481 aa23.7■■□□□ 1.38
MBD3-211ENST00000592965 DNA2P51530 1060 aa23.7■■□□□ 1.38
MBD3-211ENST00000592965 ANO6Q4KMQ2 910 aa23.7■■□□□ 1.38
MBD3-211ENST00000592965 EFHC2Q5JST6 749 aa23.7■■□□□ 1.38
MBD3-211ENST00000592965 PROSER1Q86XN7 944 aa23.7■■□□□ 1.38
MBD3-211ENST00000592965 EID2Q8N6I1 236 aa23.7■■□□□ 1.38
MBD3-211ENST00000592965 CNDP2Q96KP4 475 aaKnown RBP23.7■■□□□ 1.38
MBD3-211ENST00000592965 MCEEQ96PE7 176 aa23.7■■□□□ 1.38
MBD3-211ENST00000592965 CNPY3Q9BT09 278 aa23.7■■□□□ 1.38
MBD3-211ENST00000592965 SYT11Q9BT88 431 aa23.7■■□□□ 1.38
MBD3-211ENST00000592965 HECAQ9UBI9 543 aaPredicted RBP23.7■■□□□ 1.38
MBD3-211ENST00000592965 HPCAL4Q9UM19 191 aa23.7■■□□□ 1.38
MBD3-211ENST00000592965 ZFR2Q9UPR6 939 aaKnown RBP23.7■■□□□ 1.38
MBD3-211ENST00000592965 ACTL7AQ9Y615 435 aa23.7■■□□□ 1.38
MBD3-211ENST00000592965 TDRD6O60522 2096 aaKnown RBP23.69■■□□□ 1.38
MBD3-211ENST00000592965 NBEAQ8NFP9 2946 aa23.69■■□□□ 1.38
MBD3-211ENST00000592965 AP1G1O43747 822 aa23.69■■□□□ 1.38
MBD3-211ENST00000592965 PCDH8O95206 1070 aa23.69■■□□□ 1.38
MBD3-211ENST00000592965 LDOC1O95751 146 aaPredicted RBP23.69■■□□□ 1.38
MBD3-211ENST00000592965 GSRP00390 522 aa23.69■■□□□ 1.38
MBD3-211ENST00000592965 AIF1P55008 147 aa23.69■■□□□ 1.38
MBD3-211ENST00000592965 RPL7AP62424 266 aaKnown RBP23.69■■□□□ 1.38
MBD3-211ENST00000592965 BNIP3Q12983 259 aa23.69■■□□□ 1.38
MBD3-211ENST00000592965 POLD3Q15054 466 aaPredicted RBP23.69■■□□□ 1.38
MBD3-211ENST00000592965 SEL1L3Q68CR1 1132 aa23.69■■□□□ 1.38
MBD3-211ENST00000592965 ACAD10Q6JQN1 1059 aa23.69■■□□□ 1.38
MBD3-211ENST00000592965 KIAA1161Q6NSJ0 714 aa23.69■■□□□ 1.38
MBD3-211ENST00000592965 PPP1R2P3Q6NXS1 205 aa23.69■■□□□ 1.38
MBD3-211ENST00000592965 IRF2BP2Q7Z5L9 587 aa23.69■■□□□ 1.38
MBD3-211ENST00000592965 RTL3Q8N8U3 475 aaKnown RBP23.69■■□□□ 1.38
MBD3-211ENST00000592965 BAP1Q92560 729 aa23.69■■□□□ 1.38
MBD3-211ENST00000592965 KLK6Q92876 244 aa23.69■■□□□ 1.38
MBD3-211ENST00000592965 LRIG1Q96JA1 1093 aa23.69■■□□□ 1.38
MBD3-211ENST00000592965 TM6SF2Q9BZW4 377 aa23.69■■□□□ 1.38
MBD3-211ENST00000592965 ZDHHC6Q9H6R6 413 aa23.69■■□□□ 1.38
MBD3-211ENST00000592965 LAMA5O15230 3695 aa23.69■■□□□ 1.38
MBD3-211ENST00000592965 ZSCAN5CA6NGD5 496 aaPredicted RBP23.68■■□□□ 1.38
MBD3-211ENST00000592965 TAF4O00268 1085 aa23.68■■□□□ 1.38
MBD3-211ENST00000592965 TEX33O43247 280 aa23.68■■□□□ 1.38
MBD3-211ENST00000592965 C1SP09871 688 aa23.68■■□□□ 1.38
MBD3-211ENST00000592965 THEGLP0DJG4 465 aa23.68■■□□□ 1.38
MBD3-211ENST00000592965 CDK4P11802 303 aa23.68■■□□□ 1.38
MBD3-211ENST00000592965 CCDC157Q569K6 752 aa23.68■■□□□ 1.38
MBD3-211ENST00000592965 PARS2Q7L3T8 475 aaKnown RBP23.68■■□□□ 1.38
MBD3-211ENST00000592965 ZSCAN30Q86W11 494 aa23.68■■□□□ 1.38
MBD3-211ENST00000592965 MCOLN2Q8IZK6 566 aa23.68■■□□□ 1.38
MBD3-211ENST00000592965 MYOCQ99972 504 aa23.68■■□□□ 1.38
MBD3-211ENST00000592965 CCDC86Q9H6F5 360 aaKnown RBP23.68■■□□□ 1.38
MBD3-211ENST00000592965 NOL6Q9H6R4 1146 aaKnown RBP23.68■■□□□ 1.38
MBD3-211ENST00000592965 RTN4Q9NQC3 1192 aaKnown RBP23.68■■□□□ 1.38
MBD3-211ENST00000592965 FADS3Q9Y5Q0 445 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms