RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 PSMD13Q9UNM6 376 aa17.33■□□□□ 0.36
SMARCA4-215ENST00000590574 COL1A2P08123 1366 aa17.33■□□□□ 0.36
SMARCA4-215ENST00000590574 GRIN3BO60391 1043 aa17.33■□□□□ 0.36
SMARCA4-215ENST00000590574 AP2A1O95782 977 aa17.33■□□□□ 0.36
SMARCA4-215ENST00000590574 SERPINB10P48595 397 aa17.33■□□□□ 0.36
SMARCA4-215ENST00000590574 TEX44Q53QW1 395 aa17.33■□□□□ 0.36
SMARCA4-215ENST00000590574 PGLYRP2Q96PD5 576 aa17.33■□□□□ 0.36
SMARCA4-215ENST00000590574 DCUN1D5Q9BTE7 237 aa17.33■□□□□ 0.36
SMARCA4-215ENST00000590574 FZD10Q9ULW2 581 aa17.33■□□□□ 0.36
SMARCA4-215ENST00000590574 FARP1Q9Y4F1 1045 aaPredicted RBP17.33■□□□□ 0.36
SMARCA4-215ENST00000590574 C15orf38-AP3S2A0A0A6YYH1 394 aa17.33■□□□□ 0.36
SMARCA4-215ENST00000590574 TTLL13PA6NNM8 815 aa17.33■□□□□ 0.36
SMARCA4-215ENST00000590574 BUD23O43709 281 aaKnown RBP17.33■□□□□ 0.36
SMARCA4-215ENST00000590574 C22orf31O95567 290 aa17.33■□□□□ 0.36
SMARCA4-215ENST00000590574 LMO2P25791 158 aa17.33■□□□□ 0.36
SMARCA4-215ENST00000590574 PEX2P28328 305 aa17.33■□□□□ 0.36
SMARCA4-215ENST00000590574 ZNF132P52740 706 aa17.33■□□□□ 0.36
SMARCA4-215ENST00000590574 PFKFB4Q16877 469 aa17.33■□□□□ 0.36
SMARCA4-215ENST00000590574 OTUD3Q5T2D3 398 aaPredicted RBP17.33■□□□□ 0.36
SMARCA4-215ENST00000590574 ARPINQ7Z6K5 226 aa17.33■□□□□ 0.36
SMARCA4-215ENST00000590574 FAXDC2Q96IV6 333 aa17.33■□□□□ 0.36
SMARCA4-215ENST00000590574 LENG8Q96PV6 779 aaPredicted RBP17.33■□□□□ 0.36
SMARCA4-215ENST00000590574 PEBP4Q96S96 227 aa17.33■□□□□ 0.36
SMARCA4-215ENST00000590574 CLOCKO15516 846 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 SERPINF2P08697 491 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 TFEBP19484 476 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 WNT7BP56706 349 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 POLD3Q15054 466 aaPredicted RBP17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 LPPQ93052 612 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 BHMTQ93088 406 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 AGAP2Q99490 1192 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 SEMA4BQ9NPR2 832 aaPredicted RBP17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 SLC7A8Q9UHI5 535 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 SLC8A2Q9UPR5 921 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 CCDC154A6NI56 674 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 ENDOD1O94919 500 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 DPYSL2Q16555 572 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 SLC39A12Q504Y0 691 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 TTC30AQ86WT1 665 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 IPPQ9Y573 584 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 SMIM31A0A1B0GVY4 71 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 ESRRBO95718 433 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 FMO4P31512 558 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 GRM3Q14832 879 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 AARS2Q5JTZ9 985 aaKnown RBP17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 CACHD1Q5VU97 1274 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 GK5Q6ZS86 529 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 CENPLQ8N0S6 344 aaPredicted RBP17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 CNGB3Q9NQW8 809 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 FBXO5Q9UKT4 447 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 TMCC1O94876 653 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 CYP2C18P33260 490 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 AIF1P55008 147 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 PCBP1Q15365 356 aaKnown RBP eCLIP17.32■□□□□ 0.363e-16■■■□□ 16
SMARCA4-215ENST00000590574 TAF2Q6P1X5 1199 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 FNDC5Q8NAU1 212 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 LPCAT1Q8NF37 534 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 TSPAN14Q8NG11 270 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 EBF3Q9H4W6 596 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 CRLS1Q9UJA2 301 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 ZMYND8Q9ULU4 1186 aaPredicted RBP17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 MAST2Q6P0Q8 1798 aa17.32■□□□□ 0.36
SMARCA4-215ENST00000590574 ATP6AP2A0A1C7CYW4 349 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 ATP6AP2O75787 350 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 CLCN5P51795 746 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 FSTL1Q12841 308 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 ANKS6Q68DC2 871 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 ANO7Q6IWH7 933 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 B3GNT9Q6UX72 402 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 PTGR2Q8N8N7 351 aaPredicted RBP17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 GBA3Q9H227 469 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 SPON1Q9HCB6 807 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 TAS2R13Q9NYV9 303 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 VCLP18206 1134 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 NDUFV1P49821 464 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 ZBTB17Q13105 803 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 ARL13AQ5H913 290 aaPredicted RBP17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 CDCA2Q69YH5 1023 aaPredicted RBP17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 AMIGO2Q86SJ2 522 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 WDTC1Q8N5D0 677 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 DDHD1Q8NEL9 900 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 SNX27Q96L92 541 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 ETAA1Q9NY74 926 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 PAPPAQ13219 1627 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 FAM159BA6NKW6 160 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 H0Y626 953 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 CDH2P19022 906 aaPredicted RBP17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 CDH5P33151 784 aaPredicted RBP17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 ACTR3P61158 418 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 NR6A1Q15406 480 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 ZFYVE28Q9HCC9 887 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 PCDHB12Q9Y5F1 795 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 CBX4O00257 560 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 DPYSL4O14531 572 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 TRIM16O95361 564 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 OAS1P00973 400 aaKnown RBP17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 AKT1P31749 480 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 PKN3Q6P5Z2 889 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 ZNF229Q9UJW7 825 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 FAM50BQ9Y247 325 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms